Gene annotation
Transcriptome id Sobic.001G190900.2,Sobic.001G190900.1
Synonym orthologous Lr34 gene;ATP-binding cassette (ABC) transporter, Sb01g016775, Lr34, ATPDR2, PDR2
Functional annotation ABCG protein (PubMedID : 21265893)
"Orthologous gene of wheat Lr34 gene, expressed in accession AusTRCF 302546, but not expreesed in BTx623 possibly due to transposon insertions in intron 4" (PubMedID : 23117720)
pleiotropic drug resistance protein 15, putative, expressed
UniProt A0A1Z5S6R0 , A0A1Z5S6D8
Pfam PF14510 PF08370 PF01061 PF00005 PF14510 PF08370 PF00005 PF01061
Panther DB PTHR19241 PTHR19241:SF236
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0016887ATPase activity GO:0005524ATP binding GO:0016887ATPase activity GO:0005524ATP binding GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT3G53480 : pleiotropic drug resistance 9
RAP-DB (Rice) LOC_Os02g32690.1,LOC_Os02g32690.2 : pleiotropic drug resistance protein 15, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS7A02G085800 , TraesCS4A02G384800 , TraesCS4A02G384800 , TraesCS7D02G080300
Populus -


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cDNA sequences
Sobic.001G190900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G312900 - -
2 Sobic.009G137401 - -
3 Sobic.001G191500 expressed protein -
4 Sobic.003G312800 - -
5 Sobic.009G094200 - -
6 Sobic.003G312600 expressed protein -
7 Sobic.006G072701 - -
8 Sobic.001G476600 Zinc finger, C3HC4 type domain containing protein, expressed K10664: E3 ubiquitin-protein ligase ATL6/9/15/31/42/55
9 Sobic.008G142200 serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
10 Sobic.009G146500 beta-galactosidase, putative, expressed -
11 Sobic.008G083100 expressed protein -
12 Sobic.001G001800 expressed protein -
13 Sobic.001G229850 - -
14 Sobic.007G141900 resistance protein SlVe1 precursor, putative, expressed -
15 Sobic.001G038700 membrane associated DUF588 domain containing protein, putative, expressed -
16 Sobic.004G033650 - -
17 Sobic.008G072800 OsMADS33 - MADS-box family gene with MIKCc type-box, expressed -
18 Sobic.004G209100 GRAM domain containing protein, expressed -
19 Sobic.001G059001 - -
20 Sobic.003G263900 reticulon domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G190900 Sobic001G190900 Sobic003G312900 Sobic003G312900 Sobic001G190900--Sobic003G312900 Sobic009G137401 Sobic009G137401 Sobic001G190900--Sobic009G137401 Sobic001G191500 Sobic001G191500 Sobic001G190900--Sobic001G191500 Sobic003G312800 Sobic003G312800 Sobic001G190900--Sobic003G312800 Sobic009G094200 Sobic009G094200 Sobic001G190900--Sobic009G094200 Sobic003G312600 Sobic003G312600 Sobic001G190900--Sobic003G312600 Sobic006G072701 Sobic006G072701 Sobic001G190900--Sobic006G072701 Sobic001G476600 Sobic001G476600 Sobic001G190900--Sobic001G476600 Sobic008G142200 Sobic008G142200 Sobic001G190900--Sobic008G142200 Sobic003G312900--Sobic003G312800 Sobic004G209100 Sobic004G209100 Sobic003G312900--Sobic004G209100 Sobic001G229850 Sobic001G229850 Sobic003G312900--Sobic001G229850 Sobic005G180850 Sobic005G180850 Sobic003G312900--Sobic005G180850 Sobic003G312900--Sobic001G190900 Sobic008G132500 Sobic008G132500 Sobic003G312900--Sobic008G132500 Sobic001G226401 Sobic001G226401 Sobic003G312900--Sobic001G226401 Sobic005G118800 Sobic005G118800 Sobic003G312900--Sobic005G118800 Sobic003G232600 Sobic003G232600 Sobic003G312900--Sobic003G232600 Sobic009G137401--Sobic001G191500 Sobic009G137401--Sobic001G190900 Sobic003G053750 Sobic003G053750 Sobic009G137401--Sobic003G053750 Sobic004G030850 Sobic004G030850 Sobic009G137401--Sobic004G030850 Sobic003G429600 Sobic003G429600 Sobic009G137401--Sobic003G429600 Sobic008G113200 Sobic008G113200 Sobic009G137401--Sobic008G113200 Sobic001G528900 Sobic001G528900 Sobic009G137401--Sobic001G528900 Sobic008G083100 Sobic008G083100 Sobic009G137401--Sobic008G083100 Sobic009G137401--Sobic006G072701 Sobic008G190600 Sobic008G190600 Sobic001G191500--Sobic008G190600 Sobic001G191500--Sobic008G142200 Sobic001G191500--Sobic009G137401 Sobic006G157450 Sobic006G157450 Sobic001G191500--Sobic006G157450 Sobic001G191500--Sobic006G072701 Sobic001G191500--Sobic001G190900 Sobic001G191500--Sobic008G083100 Sobic004G033650 Sobic004G033650 Sobic001G191500--Sobic004G033650 Sobic009G074800 Sobic009G074800 Sobic001G191500--Sobic009G074800 Sobic003G312800--Sobic003G312900 Sobic002G398300 Sobic002G398300 Sobic003G312800--Sobic002G398300 Sobic005G068000 Sobic005G068000 Sobic003G312800--Sobic005G068000 Sobic003G312800--Sobic001G190900 Sobic003G312800--Sobic003G312600 Sobic003G312800--Sobic004G209100 Sobic001G239000 Sobic001G239000 Sobic003G312800--Sobic001G239000 Sobic003G312800--Sobic005G180850 Sobic005G027350 Sobic005G027350 Sobic003G312800--Sobic005G027350 Sobic009G094200--Sobic008G142200 Sobic001G001800 Sobic001G001800 Sobic009G094200--Sobic001G001800 Sobic004G227700 Sobic004G227700 Sobic009G094200--Sobic004G227700 Sobic003G263900 Sobic003G263900 Sobic009G094200--Sobic003G263900 Sobic004G082600 Sobic004G082600 Sobic009G094200--Sobic004G082600 Sobic009G094200--Sobic001G190900 Sobic007G141900 Sobic007G141900 Sobic009G094200--Sobic007G141900 Sobic001G038700 Sobic001G038700 Sobic009G094200--Sobic001G038700 Sobic009G026600 Sobic009G026600 Sobic009G094200--Sobic009G026600 Sobic003G312600--Sobic003G312800 Sobic003G312600--Sobic002G398300 Sobic003G312600--Sobic001G190900 Sobic003G312600--Sobic001G239000 Sobic003G312600--Sobic003G312900 Sobic003G312600--Sobic001G476600 Sobic007G133733 Sobic007G133733 Sobic003G312600--Sobic007G133733 Sobic003G312600--Sobic004G209100 Sobic003G312600--Sobic005G027350 Sobic006G072701--Sobic008G083100 Sobic004G084600 Sobic004G084600 Sobic006G072701--Sobic004G084600 Sobic006G072701--Sobic001G191500 Sobic009G026700 Sobic009G026700 Sobic006G072701--Sobic009G026700 Sobic002G171901 Sobic002G171901 Sobic006G072701--Sobic002G171901 Sobic007G182300 Sobic007G182300 Sobic006G072701--Sobic007G182300 Sobic006G041200 Sobic006G041200 Sobic006G072701--Sobic006G041200 Sobic006G072701--Sobic009G074800 Sobic001G250750 Sobic001G250750 Sobic006G072701--Sobic001G250750 Sobic001G476600--Sobic003G312800 Sobic001G476600--Sobic001G190900 Sobic001G476600--Sobic003G312600 Sobic001G476600--Sobic001G239000 Sobic001G476600--Sobic009G026600 Sobic001G370800 Sobic001G370800 Sobic001G476600--Sobic001G370800 Sobic001G476600--Sobic003G312900 Sobic001G476600--Sobic005G027350 Sobic001G476600--Sobic009G094200 Sobic008G142200--Sobic004G227700 Sobic008G142200--Sobic001G191500 Sobic008G142200--Sobic009G094200 Sobic008G142200--Sobic008G190600 Sobic008G142200--Sobic003G263900 Sobic008G142200--Sobic004G033650 Sobic008G142200--Sobic009G026700 Sobic008G142200--Sobic001G038700 Sobic008G072800 Sobic008G072800 Sobic008G142200--Sobic008G072800
Octagon: transcription factors


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