Gene annotation
Transcriptome id Sobic.008G190600.1
Synonym Sb08g023080
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
oxidoreductase, putative, expressed
UniProt A0A1B6PEP7
Pfam PF03486
Panther DB PTHR10617 PTHR10617:SF103
NCBI CDD -
KEGG Orthology K07007; 3-dehydro-bile acid Delta4,6-reductase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G39940 : FAD/NAD(P)-binding oxidoreductase family protein
RAP-DB (Rice) LOC_Os12g44160.1 : oxidoreductase, putative, expressed
MaizeGDB (Corn) Zm00025a004870
Brachypodium PNT62256 , KQJ85600
Barley HORVU5Hr1G000770.42 , HORVU5Hr1G000770.41 , HORVU5Hr1G000770.38 , HORVU5Hr1G000770.33 , HORVU5Hr1G000770.31 , HORVU5Hr1G000770.30 , HORVU5Hr1G000770.37 , HORVU5Hr1G000770.36 , HORVU5Hr1G000770.35 , HORVU5Hr1G000770.34 , HORVU5Hr1G000770.28 , HORVU5Hr1G000770.29 , HORVU5Hr1G000770.22 , HORVU5Hr1G000770.25 , HORVU5Hr1G000770.18 , HORVU5Hr1G000770.15 , HORVU5Hr1G000770.17 , HORVU5Hr1G000770.16 , HORVU5Hr1G000770.11 , HORVU5Hr1G000770.10 , HORVU5Hr1G000770.13 , HORVU5Hr1G000770.12 , HORVU5Hr1G000770.14 , HORVU5Hr1G000770.9 , HORVU5Hr1G000770.8 , HORVU5Hr1G000770.1 , HORVU5Hr1G000770.2 , HORVU5Hr1G000770.5 , HORVU5Hr1G000770.4
Wheat TraesCS5A02G004100 , TraesCS5D02G012900 , TraesCSU02G073300 , TraesCSU02G073300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G074800 - -
2 Sobic.001G191500 expressed protein -
3 Sobic.005G031400 embryogenesis transmembrane protein, putative, expressed -
4 Sobic.008G142200 serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
5 Sobic.008G170800 OsWAK126 - OsWAK receptor-like protein kinase, expressed -
6 Sobic.006G157450 - -
7 Sobic.003G219300 leaf senescence related protein, putative, expressed -
8 Sobic.001G460900 expressed protein -
9 Sobic.002G226200 - -
10 Sobic.009G026700 expressed protein -
11 Sobic.008G083100 expressed protein -
12 Sobic.010G012200 - K00851: E2.7.1.12, gntK, gluconokinase
13 Sobic.004G033650 - -
14 Sobic.003G272000 expressed protein -
15 Sobic.001G038700 membrane associated DUF588 domain containing protein, putative, expressed -
16 Sobic.001G090700 expressed protein -
17 Sobic.006G072701 - -
18 Sobic.008G072800 OsMADS33 - MADS-box family gene with MIKCc type-box, expressed -
19 Sobic.001G483001 - -
20 Sobic.003G063400 glycosyltransferase family 43 protein, putative, expressed -


Gene co-expression network
sample Sobic008G190600 Sobic008G190600 Sobic009G074800 Sobic009G074800 Sobic008G190600--Sobic009G074800 Sobic001G191500 Sobic001G191500 Sobic008G190600--Sobic001G191500 Sobic005G031400 Sobic005G031400 Sobic008G190600--Sobic005G031400 Sobic008G142200 Sobic008G142200 Sobic008G190600--Sobic008G142200 Sobic008G170800 Sobic008G170800 Sobic008G190600--Sobic008G170800 Sobic006G157450 Sobic006G157450 Sobic008G190600--Sobic006G157450 Sobic003G219300 Sobic003G219300 Sobic008G190600--Sobic003G219300 Sobic001G460900 Sobic001G460900 Sobic008G190600--Sobic001G460900 Sobic002G226200 Sobic002G226200 Sobic008G190600--Sobic002G226200 Sobic009G074800--Sobic008G190600 Sobic009G026700 Sobic009G026700 Sobic009G074800--Sobic009G026700 Sobic004G033650 Sobic004G033650 Sobic009G074800--Sobic004G033650 Sobic008G083100 Sobic008G083100 Sobic009G074800--Sobic008G083100 Sobic003G272000 Sobic003G272000 Sobic009G074800--Sobic003G272000 Sobic006G072701 Sobic006G072701 Sobic009G074800--Sobic006G072701 Sobic001G250750 Sobic001G250750 Sobic009G074800--Sobic001G250750 Sobic001G001800 Sobic001G001800 Sobic009G074800--Sobic001G001800 Sobic003G375500 Sobic003G375500 Sobic009G074800--Sobic003G375500 Sobic001G191500--Sobic008G190600 Sobic001G191500--Sobic008G142200 Sobic009G137401 Sobic009G137401 Sobic001G191500--Sobic009G137401 Sobic001G191500--Sobic006G157450 Sobic001G191500--Sobic006G072701 Sobic001G190900 Sobic001G190900 Sobic001G191500--Sobic001G190900 Sobic001G191500--Sobic008G083100 Sobic001G191500--Sobic004G033650 Sobic001G191500--Sobic009G074800 Sobic005G031400--Sobic008G190600 Sobic006G213350 Sobic006G213350 Sobic005G031400--Sobic006G213350 Sobic001G483001 Sobic001G483001 Sobic005G031400--Sobic001G483001 Sobic010G012200 Sobic010G012200 Sobic005G031400--Sobic010G012200 Sobic005G031400--Sobic008G142200 Sobic005G031400--Sobic006G157450 Sobic001G520000 Sobic001G520000 Sobic005G031400--Sobic001G520000 Sobic004G315400 Sobic004G315400 Sobic005G031400--Sobic004G315400 Sobic005G031400--Sobic008G170800 Sobic004G227700 Sobic004G227700 Sobic008G142200--Sobic004G227700 Sobic008G142200--Sobic001G191500 Sobic009G094200 Sobic009G094200 Sobic008G142200--Sobic009G094200 Sobic008G142200--Sobic008G190600 Sobic003G263900 Sobic003G263900 Sobic008G142200--Sobic003G263900 Sobic008G142200--Sobic004G033650 Sobic008G142200--Sobic009G026700 Sobic001G038700 Sobic001G038700 Sobic008G142200--Sobic001G038700 Sobic008G072800 Sobic008G072800 Sobic008G142200--Sobic008G072800 Sobic001G090700 Sobic001G090700 Sobic008G170800--Sobic001G090700 Sobic008G170800--Sobic006G157450 Sobic008G170800--Sobic001G038700 Sobic008G170800--Sobic010G012200 Sobic008G170800--Sobic008G190600 Sobic003G155000 Sobic003G155000 Sobic008G170800--Sobic003G155000 Sobic001G454600 Sobic001G454600 Sobic008G170800--Sobic001G454600 Sobic008G170800--Sobic008G142200 Sobic003G253700 Sobic003G253700 Sobic008G170800--Sobic003G253700 Sobic006G157450--Sobic001G038700 Sobic006G157450--Sobic008G170800 Sobic006G157450--Sobic001G191500 Sobic006G157450--Sobic001G520000 Sobic006G157450--Sobic010G012200 Sobic006G157450--Sobic003G253700 Sobic006G157450--Sobic003G155000 Sobic006G157450--Sobic001G483001 Sobic006G157450--Sobic008G190600 Sobic003G219300--Sobic003G272000 Sobic006G041200 Sobic006G041200 Sobic003G219300--Sobic006G041200 Sobic008G132500 Sobic008G132500 Sobic003G219300--Sobic008G132500 Sobic003G219300--Sobic001G250750 Sobic007G182300 Sobic007G182300 Sobic003G219300--Sobic007G182300 Sobic002G200400 Sobic002G200400 Sobic003G219300--Sobic002G200400 Sobic003G219300--Sobic002G226200 Sobic010G235100 Sobic010G235100 Sobic003G219300--Sobic010G235100 Sobic003G219300--Sobic006G072701 Sobic009G026600 Sobic009G026600 Sobic001G460900--Sobic009G026600 Sobic001G460900--Sobic009G074800 Sobic001G460900--Sobic008G190600 Sobic001G460900--Sobic008G170800 Sobic005G027350 Sobic005G027350 Sobic001G460900--Sobic005G027350 Sobic001G460900--Sobic001G090700 Sobic002G309300 Sobic002G309300 Sobic001G460900--Sobic002G309300 Sobic001G460900--Sobic001G038700 Sobic009G186300 Sobic009G186300 Sobic001G460900--Sobic009G186300 Sobic004G255550 Sobic004G255550 Sobic002G226200--Sobic004G255550 Sobic002G226200--Sobic003G219300 Sobic002G226200--Sobic008G083100 Sobic003G267600 Sobic003G267600 Sobic002G226200--Sobic003G267600 Sobic002G226200--Sobic006G041200 Sobic002G226200--Sobic008G190600 Sobic002G226200--Sobic001G191500 Sobic007G016200 Sobic007G016200 Sobic002G226200--Sobic007G016200 Sobic006G021100 Sobic006G021100 Sobic002G226200--Sobic006G021100
Octagon: transcription factors


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