Gene annotation
Transcriptome id Sobic.010G054150.1
Synonym -
Functional annotation -
UniProt A0A1W0VRJ7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G248450 - -
2 Sobic.007G052000 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
3 Sobic.004G070150 - -
4 Sobic.010G274700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@receptor kinase, putative, expressed -
5 Sobic.002G226200 - -
6 Sobic.007G016200 expressed protein -
7 Sobic.007G137750 - -
8 Sobic.005G182100 Leucine Rich Repeat family protein, expressed -
9 Sobic.002G208500 glutamate receptor 2.6 precursor, putative, expressed K05387: glutamate receptor, ionotropic, plant
10 Sobic.007G137100 - -
11 Sobic.001G431600 lectin-like receptor kinase, putative, expressed -
12 Sobic.003G230800 - -
13 Sobic.003G335000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@leucine-rich repeat family protein, putative, expressed -
14 Sobic.002G208700 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
15 Sobic.002G375500 protein kinase domain containing protein, expressed -
16 Sobic.003G312800 - -
17 Sobic.003G329300 disease resistance RPP13-like protein 1, putative, expressed -
18 Sobic.001G245100 - -
19 Sobic.001G090700 expressed protein -
20 Sobic.007G174500 carrier, putative, expressed -


Gene co-expression network
sample Sobic010G054150 Sobic010G054150 Sobic006G248450 Sobic006G248450 Sobic010G054150--Sobic006G248450 Sobic007G052000 Sobic007G052000 Sobic010G054150--Sobic007G052000 Sobic004G070150 Sobic004G070150 Sobic010G054150--Sobic004G070150 Sobic010G274700 Sobic010G274700 Sobic010G054150--Sobic010G274700 Sobic002G226200 Sobic002G226200 Sobic010G054150--Sobic002G226200 Sobic007G016200 Sobic007G016200 Sobic010G054150--Sobic007G016200 Sobic007G137750 Sobic007G137750 Sobic010G054150--Sobic007G137750 Sobic005G182100 Sobic005G182100 Sobic010G054150--Sobic005G182100 Sobic002G208500 Sobic002G208500 Sobic010G054150--Sobic002G208500 Sobic006G248450--Sobic010G054150 Sobic006G248450--Sobic010G274700 Sobic003G335000 Sobic003G335000 Sobic006G248450--Sobic003G335000 Sobic003G312800 Sobic003G312800 Sobic006G248450--Sobic003G312800 Sobic001G431600 Sobic001G431600 Sobic006G248450--Sobic001G431600 Sobic002G297100 Sobic002G297100 Sobic006G248450--Sobic002G297100 Sobic002G398300 Sobic002G398300 Sobic006G248450--Sobic002G398300 Sobic006G248450--Sobic007G052000 Sobic003G329300 Sobic003G329300 Sobic006G248450--Sobic003G329300 Sobic007G052000--Sobic010G054150 Sobic001G245100 Sobic001G245100 Sobic007G052000--Sobic001G245100 Sobic007G052000--Sobic003G335000 Sobic009G186300 Sobic009G186300 Sobic007G052000--Sobic009G186300 Sobic008G170800 Sobic008G170800 Sobic007G052000--Sobic008G170800 Sobic002G309300 Sobic002G309300 Sobic007G052000--Sobic002G309300 Sobic007G052000--Sobic006G248450 Sobic008G142200 Sobic008G142200 Sobic007G052000--Sobic008G142200 Sobic001G191500 Sobic001G191500 Sobic007G052000--Sobic001G191500 Sobic004G070150--Sobic010G054150 Sobic003G276700 Sobic003G276700 Sobic004G070150--Sobic003G276700 Sobic002G107700 Sobic002G107700 Sobic004G070150--Sobic002G107700 Sobic003G399800 Sobic003G399800 Sobic004G070150--Sobic003G399800 Sobic004G237900 Sobic004G237900 Sobic004G070150--Sobic004G237900 Sobic004G070150--Sobic007G137750 Sobic010G084900 Sobic010G084900 Sobic004G070150--Sobic010G084900 Sobic004G070150--Sobic007G052000 Sobic001G296600 Sobic001G296600 Sobic004G070150--Sobic001G296600 Sobic010G274700--Sobic003G329300 Sobic007G174500 Sobic007G174500 Sobic010G274700--Sobic007G174500 Sobic002G375500 Sobic002G375500 Sobic010G274700--Sobic002G375500 Sobic010G274700--Sobic006G248450 Sobic006G145300 Sobic006G145300 Sobic010G274700--Sobic006G145300 Sobic010G142501 Sobic010G142501 Sobic010G274700--Sobic010G142501 Sobic010G274700--Sobic001G431600 Sobic007G175100 Sobic007G175100 Sobic010G274700--Sobic007G175100 Sobic001G229850 Sobic001G229850 Sobic010G274700--Sobic001G229850 Sobic004G255550 Sobic004G255550 Sobic002G226200--Sobic004G255550 Sobic003G219300 Sobic003G219300 Sobic002G226200--Sobic003G219300 Sobic008G083100 Sobic008G083100 Sobic002G226200--Sobic008G083100 Sobic003G267600 Sobic003G267600 Sobic002G226200--Sobic003G267600 Sobic006G041200 Sobic006G041200 Sobic002G226200--Sobic006G041200 Sobic008G190600 Sobic008G190600 Sobic002G226200--Sobic008G190600 Sobic002G226200--Sobic001G191500 Sobic002G226200--Sobic007G016200 Sobic006G021100 Sobic006G021100 Sobic002G226200--Sobic006G021100 Sobic007G016200--Sobic002G226200 Sobic007G016200--Sobic003G267600 Sobic007G016200--Sobic005G182100 Sobic007G078900 Sobic007G078900 Sobic007G016200--Sobic007G078900 Sobic007G016200--Sobic001G245100 Sobic007G016200--Sobic001G191500 Sobic007G137100 Sobic007G137100 Sobic007G016200--Sobic007G137100 Sobic009G252500 Sobic009G252500 Sobic007G016200--Sobic009G252500 Sobic007G016200--Sobic010G054150 Sobic007G137750--Sobic010G054150 Sobic002G290800 Sobic002G290800 Sobic007G137750--Sobic002G290800 Sobic006G165501 Sobic006G165501 Sobic007G137750--Sobic006G165501 Sobic003G001650 Sobic003G001650 Sobic007G137750--Sobic003G001650 Sobic007G137750--Sobic006G248450 Sobic007G137750--Sobic004G070150 Sobic006G268100 Sobic006G268100 Sobic007G137750--Sobic006G268100 Sobic010G042300 Sobic010G042300 Sobic007G137750--Sobic010G042300 Sobic003G304000 Sobic003G304000 Sobic007G137750--Sobic003G304000 Sobic005G182100--Sobic007G137100 Sobic005G182100--Sobic003G329300 Sobic005G182100--Sobic007G016200 Sobic004G203633 Sobic004G203633 Sobic005G182100--Sobic004G203633 Sobic002G033200 Sobic002G033200 Sobic005G182100--Sobic002G033200 Sobic004G118300 Sobic004G118300 Sobic005G182100--Sobic004G118300 Sobic001G090700 Sobic001G090700 Sobic005G182100--Sobic001G090700 Sobic005G182100--Sobic010G274700 Sobic009G137401 Sobic009G137401 Sobic005G182100--Sobic009G137401 Sobic002G208500--Sobic002G375500 Sobic002G208500--Sobic007G174500 Sobic002G208500--Sobic002G226200 Sobic009G247200 Sobic009G247200 Sobic002G208500--Sobic009G247200 Sobic003G230800 Sobic003G230800 Sobic002G208500--Sobic003G230800 Sobic002G208500--Sobic010G142501 Sobic002G208500--Sobic003G219300 Sobic002G129900 Sobic002G129900 Sobic002G208500--Sobic002G129900 Sobic005G168200 Sobic005G168200 Sobic002G208500--Sobic005G168200
Octagon: transcription factors


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