Gene annotation
Transcriptome id Sobic.003G335000.1
Synonym Sb03g037960
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
leucine-rich repeat family protein, putative, expressed
UniProt A0A1B6Q6R1
Pfam PF08263 PF07714
Panther DB PTHR27003 PTHR27003:SF17
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G79620 : Leucine-rich repeat protein kinase family protein
RAP-DB (Rice) LOC_Os01g60060.1 : leucine-rich repeat family protein, putative, expressed
MaizeGDB (Corn) Zm00025a024377 , Zm00025a000960 , Zm00025a027093
Brachypodium PNT73104 , PNT73103 , KQJ89621 , KQJ89620
Barley HORVU3Hr1G080330.37 , HORVU3Hr1G080330.40 , HORVU3Hr1G080330.41 , HORVU3Hr1G080330.42 , HORVU3Hr1G080330.43 , HORVU3Hr1G080330.44 , HORVU3Hr1G080330.45 , HORVU3Hr1G080330.46 , HORVU3Hr1G080330.49 , HORVU3Hr1G080330.7 , HORVU3Hr1G080330.6 , HORVU3Hr1G080330.4 , HORVU3Hr1G080330.3 , HORVU3Hr1G080330.9 , HORVU3Hr1G080330.26 , HORVU3Hr1G080330.27 , HORVU3Hr1G080330.24 , HORVU3Hr1G080330.25 , HORVU3Hr1G080330.22 , HORVU3Hr1G080330.23 , HORVU3Hr1G080330.28 , HORVU3Hr1G080330.33 , HORVU3Hr1G080330.34 , HORVU3Hr1G080330.36 , HORVU3Hr1G080330.52 , HORVU3Hr1G080330.51 , HORVU3Hr1G080330.50 , HORVU3Hr1G080330.19 , HORVU3Hr1G080330.18 , HORVU3Hr1G080330.17 , HORVU3Hr1G080330.16 , HORVU3Hr1G080330.14 , HORVU3Hr1G080330.12 , HORVU3Hr1G080330.10 , HORVU3Hr1G080330.31 , HORVU3Hr1G080330.30 , HORVU3Hr1G080330.32 , HORVU3Hr1G080330.39 , HORVU3Hr1G080330.38
Wheat TraesCS3B02G371600 , TraesCS3D02G333500 , TraesCS3A02G340000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G334400 verticillium wilt disease resistance protein precursor, putative, expressed -
2 Sobic.006G223101 - -
3 Sobic.003G335100 leucine-rich repeat family protein, putative, expressed -
4 Sobic.008G085800 - -
5 Sobic.002G171901 - -
6 Sobic.001G229850 - -
7 Sobic.006G223601 - -
8 Sobic.007G137100 - -
9 Sobic.007G004400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.001G431600 lectin-like receptor kinase, putative, expressed -
11 Sobic.006G248450 - -
12 Sobic.007G052000 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
13 Sobic.002G074900 receptor kinase, putative, expressed -
14 Sobic.010G235100 leucine rich repeat protein, putative, expressed -
15 Sobic.010G163666 - -
16 Sobic.005G118500 expressed protein -
17 Sobic.003G329300 disease resistance RPP13-like protein 1, putative, expressed -
18 Sobic.010G028333 - -
19 Sobic.003G406850 - -
20 Sobic.004G203633 - -


Gene co-expression network
sample Sobic003G335000 Sobic003G335000 Sobic003G334400 Sobic003G334400 Sobic003G335000--Sobic003G334400 Sobic006G223101 Sobic006G223101 Sobic003G335000--Sobic006G223101 Sobic003G335100 Sobic003G335100 Sobic003G335000--Sobic003G335100 Sobic008G085800 Sobic008G085800 Sobic003G335000--Sobic008G085800 Sobic002G171901 Sobic002G171901 Sobic003G335000--Sobic002G171901 Sobic001G229850 Sobic001G229850 Sobic003G335000--Sobic001G229850 Sobic006G223601 Sobic006G223601 Sobic003G335000--Sobic006G223601 Sobic007G137100 Sobic007G137100 Sobic003G335000--Sobic007G137100 Sobic007G004400 Sobic007G004400 Sobic003G335000--Sobic007G004400 Sobic003G334400--Sobic002G171901 Sobic009G192400 Sobic009G192400 Sobic003G334400--Sobic009G192400 Sobic003G334400--Sobic003G335000 Sobic003G334400--Sobic008G085800 Sobic007G182300 Sobic007G182300 Sobic003G334400--Sobic007G182300 Sobic010G264150 Sobic010G264150 Sobic003G334400--Sobic010G264150 Sobic004G084600 Sobic004G084600 Sobic003G334400--Sobic004G084600 Sobic006G072701 Sobic006G072701 Sobic003G334400--Sobic006G072701 Sobic010G163666 Sobic010G163666 Sobic003G334400--Sobic010G163666 Sobic006G223101--Sobic006G223601 Sobic006G223101--Sobic003G335100 Sobic006G223101--Sobic007G004400 Sobic003G406850 Sobic003G406850 Sobic006G223101--Sobic003G406850 Sobic008G115200 Sobic008G115200 Sobic006G223101--Sobic008G115200 Sobic002G147550 Sobic002G147550 Sobic006G223101--Sobic002G147550 Sobic006G223101--Sobic001G229850 Sobic003G112100 Sobic003G112100 Sobic006G223101--Sobic003G112100 Sobic001G431600 Sobic001G431600 Sobic006G223101--Sobic001G431600 Sobic003G335100--Sobic007G004400 Sobic003G335100--Sobic006G223601 Sobic003G335100--Sobic006G223101 Sobic003G335100--Sobic003G406850 Sobic003G335100--Sobic003G112100 Sobic002G074900 Sobic002G074900 Sobic003G335100--Sobic002G074900 Sobic003G335100--Sobic008G115200 Sobic006G176900 Sobic006G176900 Sobic003G335100--Sobic006G176900 Sobic008G119600 Sobic008G119600 Sobic003G335100--Sobic008G119600 Sobic008G085800--Sobic002G171901 Sobic007G174500 Sobic007G174500 Sobic008G085800--Sobic007G174500 Sobic008G085800--Sobic006G223101 Sobic003G329300 Sobic003G329300 Sobic008G085800--Sobic003G329300 Sobic009G176100 Sobic009G176100 Sobic008G085800--Sobic009G176100 Sobic004G138100 Sobic004G138100 Sobic008G085800--Sobic004G138100 Sobic008G085800--Sobic007G004400 Sobic008G085800--Sobic003G335100 Sobic008G085800--Sobic003G334400 Sobic002G171901--Sobic004G084600 Sobic002G171901--Sobic003G334400 Sobic002G171901--Sobic008G085800 Sobic007G203800 Sobic007G203800 Sobic002G171901--Sobic007G203800 Sobic004G117850 Sobic004G117850 Sobic002G171901--Sobic004G117850 Sobic006G041200 Sobic006G041200 Sobic002G171901--Sobic006G041200 Sobic002G171901--Sobic006G072701 Sobic006G111000 Sobic006G111000 Sobic002G171901--Sobic006G111000 Sobic002G171901--Sobic010G163666 Sobic003G312900 Sobic003G312900 Sobic001G229850--Sobic003G312900 Sobic001G229850--Sobic006G223101 Sobic001G229850--Sobic002G074900 Sobic006G258100 Sobic006G258100 Sobic001G229850--Sobic006G258100 Sobic003G069400 Sobic003G069400 Sobic001G229850--Sobic003G069400 Sobic006G048400 Sobic006G048400 Sobic001G229850--Sobic006G048400 Sobic001G229850--Sobic003G335000 Sobic002G181066 Sobic002G181066 Sobic001G229850--Sobic002G181066 Sobic001G229850--Sobic003G335100 Sobic006G223601--Sobic006G223101 Sobic006G223601--Sobic003G335100 Sobic006G223601--Sobic003G406850 Sobic006G223601--Sobic002G147550 Sobic006G223601--Sobic003G112100 Sobic006G223601--Sobic007G004400 Sobic006G223601--Sobic006G176900 Sobic006G223601--Sobic008G115200 Sobic006G149900 Sobic006G149900 Sobic006G223601--Sobic006G149900 Sobic007G137100--Sobic003G329300 Sobic005G182100 Sobic005G182100 Sobic007G137100--Sobic005G182100 Sobic007G137100--Sobic008G085800 Sobic007G137100--Sobic002G171901 Sobic003G358150 Sobic003G358150 Sobic007G137100--Sobic003G358150 Sobic007G137100--Sobic007G174500 Sobic003G399200 Sobic003G399200 Sobic007G137100--Sobic003G399200 Sobic007G137100--Sobic003G335000 Sobic004G118300 Sobic004G118300 Sobic007G137100--Sobic004G118300 Sobic007G004400--Sobic003G335100 Sobic007G004400--Sobic008G119600 Sobic007G004400--Sobic008G115200 Sobic007G004400--Sobic006G223101 Sobic007G004400--Sobic002G074900 Sobic007G004400--Sobic003G406850 Sobic007G004400--Sobic006G176900 Sobic010G136700 Sobic010G136700 Sobic007G004400--Sobic010G136700 Sobic007G004400--Sobic006G223601
Octagon: transcription factors


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