Gene annotation
Transcriptome id Sobic.002G375500.2,Sobic.002G375500.1
Synonym Sb02g039310
Functional annotation protein kinase domain containing protein, expressed
UniProt A0A1B6QFM3
Pfam PF00564 PF07714
Panther DB PTHR23257 PTHR23257:SF444
NCBI CDD KOG0192; Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G35050 : Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain
RAP-DB (Rice) LOC_Os03g28300.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G175100 carrier, putative, expressed -
2 Sobic.007G038100 lectin-like receptor kinase, putative, expressed -
3 Sobic.002G208500 glutamate receptor 2.6 precursor, putative, expressed K05387: glutamate receptor, ionotropic, plant
4 Sobic.007G174500 carrier, putative, expressed -
5 Sobic.010G274700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@receptor kinase, putative, expressed -
6 Sobic.001G145550 - -
7 Sobic.006G054200 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@multidrug resistance-associated protein 9("PubMedID : 26759170,PubMedID : 24597475")@multidrug resistance-associated protein, putative, expressed -
8 Sobic.005G168200 -(PubMedID : 34525227)@expressed protein K17911: beta-carotene isomerase
9 Sobic.001G174100 GRAS family transcription factor containing protein, expressed -
10 Sobic.007G175000 carrier, putative, expressed -
11 Sobic.002G176700 receptor-like protein kinase 2, putative, expressed -
12 Sobic.001G422001 - -
13 Sobic.009G247200 - -
14 Sobic.007G149500 expressed protein -
15 Sobic.006G145300 Os4bglu14 - monolignol beta-glucoside homologue without catalytic acid/base, expressed -
16 Sobic.001G174200 GRAS family transcription factor containing protein, expressed -
17 Sobic.002G046150 - -
18 Sobic.003G251000 S-locus-like receptor protein kinase, putative, expressed -
19 Sobic.006G215650 - -
20 Sobic.003G329300 disease resistance RPP13-like protein 1, putative, expressed -


Gene co-expression network
sample Sobic002G375500 Sobic002G375500 Sobic007G175100 Sobic007G175100 Sobic002G375500--Sobic007G175100 Sobic007G038100 Sobic007G038100 Sobic002G375500--Sobic007G038100 Sobic002G208500 Sobic002G208500 Sobic002G375500--Sobic002G208500 Sobic007G174500 Sobic007G174500 Sobic002G375500--Sobic007G174500 Sobic010G274700 Sobic010G274700 Sobic002G375500--Sobic010G274700 Sobic001G145550 Sobic001G145550 Sobic002G375500--Sobic001G145550 Sobic006G054200 Sobic006G054200 Sobic002G375500--Sobic006G054200 Sobic005G168200 Sobic005G168200 Sobic002G375500--Sobic005G168200 Sobic001G174100 Sobic001G174100 Sobic002G375500--Sobic001G174100 Sobic007G175100--Sobic002G375500 Sobic007G175000 Sobic007G175000 Sobic007G175100--Sobic007G175000 Sobic007G175100--Sobic007G038100 Sobic001G174200 Sobic001G174200 Sobic007G175100--Sobic001G174200 Sobic007G175100--Sobic010G274700 Sobic003G057000 Sobic003G057000 Sobic007G175100--Sobic003G057000 Sobic007G175100--Sobic001G174100 Sobic007G175100--Sobic001G145550 Sobic001G422001 Sobic001G422001 Sobic007G175100--Sobic001G422001 Sobic007G038100--Sobic002G375500 Sobic007G038100--Sobic007G175100 Sobic007G038100--Sobic007G175000 Sobic007G038100--Sobic007G174500 Sobic007G038100--Sobic001G145550 Sobic006G215650 Sobic006G215650 Sobic007G038100--Sobic006G215650 Sobic007G038100--Sobic001G174100 Sobic003G368550 Sobic003G368550 Sobic007G038100--Sobic003G368550 Sobic009G213150 Sobic009G213150 Sobic007G038100--Sobic009G213150 Sobic002G208500--Sobic002G375500 Sobic002G208500--Sobic007G174500 Sobic002G226200 Sobic002G226200 Sobic002G208500--Sobic002G226200 Sobic009G247200 Sobic009G247200 Sobic002G208500--Sobic009G247200 Sobic003G230800 Sobic003G230800 Sobic002G208500--Sobic003G230800 Sobic010G142501 Sobic010G142501 Sobic002G208500--Sobic010G142501 Sobic003G219300 Sobic003G219300 Sobic002G208500--Sobic003G219300 Sobic002G129900 Sobic002G129900 Sobic002G208500--Sobic002G129900 Sobic002G208500--Sobic005G168200 Sobic008G085800 Sobic008G085800 Sobic007G174500--Sobic008G085800 Sobic007G174500--Sobic010G142501 Sobic007G174500--Sobic010G274700 Sobic003G329300 Sobic003G329300 Sobic007G174500--Sobic003G329300 Sobic007G174500--Sobic002G375500 Sobic007G174500--Sobic002G208500 Sobic004G138100 Sobic004G138100 Sobic007G174500--Sobic004G138100 Sobic001G431600 Sobic001G431600 Sobic007G174500--Sobic001G431600 Sobic005G231000 Sobic005G231000 Sobic007G174500--Sobic005G231000 Sobic010G274700--Sobic003G329300 Sobic010G274700--Sobic007G174500 Sobic010G274700--Sobic002G375500 Sobic006G248450 Sobic006G248450 Sobic010G274700--Sobic006G248450 Sobic006G145300 Sobic006G145300 Sobic010G274700--Sobic006G145300 Sobic010G274700--Sobic010G142501 Sobic010G274700--Sobic001G431600 Sobic010G274700--Sobic007G175100 Sobic001G229850 Sobic001G229850 Sobic010G274700--Sobic001G229850 Sobic009G037500 Sobic009G037500 Sobic001G145550--Sobic009G037500 Sobic001G145550--Sobic001G422001 Sobic001G145550--Sobic009G213150 Sobic007G149500 Sobic007G149500 Sobic001G145550--Sobic007G149500 Sobic006G094900 Sobic006G094900 Sobic001G145550--Sobic006G094900 Sobic002G094000 Sobic002G094000 Sobic001G145550--Sobic002G094000 Sobic004G278800 Sobic004G278800 Sobic001G145550--Sobic004G278800 Sobic003G142500 Sobic003G142500 Sobic001G145550--Sobic003G142500 Sobic001G145550--Sobic002G375500 Sobic006G054200--Sobic002G375500 Sobic006G054200--Sobic010G274700 Sobic006G054200--Sobic006G145300 Sobic010G174000 Sobic010G174000 Sobic006G054200--Sobic010G174000 Sobic004G209100 Sobic004G209100 Sobic006G054200--Sobic004G209100 Sobic003G210500 Sobic003G210500 Sobic006G054200--Sobic003G210500 Sobic002G297100 Sobic002G297100 Sobic006G054200--Sobic002G297100 Sobic003G358150 Sobic003G358150 Sobic006G054200--Sobic003G358150 Sobic006G223101 Sobic006G223101 Sobic006G054200--Sobic006G223101 Sobic005G168200--Sobic009G247200 Sobic005G168200--Sobic001G145550 Sobic005G168200--Sobic001G174100 Sobic005G168200--Sobic002G375500 Sobic005G168200--Sobic001G422001 Sobic002G046150 Sobic002G046150 Sobic005G168200--Sobic002G046150 Sobic005G168200--Sobic002G208500 Sobic002G212900 Sobic002G212900 Sobic005G168200--Sobic002G212900 Sobic005G168200--Sobic009G213150 Sobic001G174100--Sobic005G168200 Sobic001G174100--Sobic002G375500 Sobic004G267650 Sobic004G267650 Sobic001G174100--Sobic004G267650 Sobic001G174100--Sobic007G175100 Sobic001G174100--Sobic007G038100 Sobic001G174100--Sobic002G046150 Sobic001G174100--Sobic001G145550 Sobic001G174100--Sobic002G208500 Sobic008G046700 Sobic008G046700 Sobic001G174100--Sobic008G046700
Octagon: transcription factors


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