Gene annotation
Transcriptome id Sobic.004G070150.1
Synonym -
Functional annotation -
UniProt A0A1Z5RLR1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G054150 - -
2 Sobic.003G276700 "domain confirmed by Pfam database, expressed in flower, expression induced by IAA and ABA treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein
3 Sobic.002G107700 - -
4 Sobic.003G399800 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
5 Sobic.004G237900 no apical meristem protein, putative, expressed -
6 Sobic.007G137750 - -
7 Sobic.010G084900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@protein kinase family protein, putative, expressed -
8 Sobic.007G052000 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
9 Sobic.001G296600 - -
10 Sobic.004G258450 - -
11 Sobic.009G049100 - -
12 Sobic.007G016200 expressed protein -
13 Sobic.001G104050 - -
14 Sobic.004G357600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Sucrose synthase genes(PubMedID : 24456189)@sucrose synthase(PubMedID : 26616172)@Sugar synthesis(PubMedID : 27330561)@sucrose synthase, putative, expressed K00695: sucrose synthase
15 Sobic.010G184201 - -
16 Sobic.004G070400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@metallo-beta-lactamase, putative, expressed -
17 Sobic.001G460150 - -
18 Sobic.002G290800 no apical meristem protein, putative, expressed -
19 Sobic.007G044350 - -
20 Sobic.006G248450 - -


Gene co-expression network
sample Sobic004G070150 Sobic004G070150 Sobic010G054150 Sobic010G054150 Sobic004G070150--Sobic010G054150 Sobic003G276700 Sobic003G276700 Sobic004G070150--Sobic003G276700 Sobic002G107700 Sobic002G107700 Sobic004G070150--Sobic002G107700 Sobic003G399800 Sobic003G399800 Sobic004G070150--Sobic003G399800 Sobic004G237900 Sobic004G237900 Sobic004G070150--Sobic004G237900 Sobic007G137750 Sobic007G137750 Sobic004G070150--Sobic007G137750 Sobic010G084900 Sobic010G084900 Sobic004G070150--Sobic010G084900 Sobic007G052000 Sobic007G052000 Sobic004G070150--Sobic007G052000 Sobic001G296600 Sobic001G296600 Sobic004G070150--Sobic001G296600 Sobic006G248450 Sobic006G248450 Sobic010G054150--Sobic006G248450 Sobic010G054150--Sobic007G052000 Sobic010G054150--Sobic004G070150 Sobic010G274700 Sobic010G274700 Sobic010G054150--Sobic010G274700 Sobic002G226200 Sobic002G226200 Sobic010G054150--Sobic002G226200 Sobic007G016200 Sobic007G016200 Sobic010G054150--Sobic007G016200 Sobic010G054150--Sobic007G137750 Sobic005G182100 Sobic005G182100 Sobic010G054150--Sobic005G182100 Sobic002G208500 Sobic002G208500 Sobic010G054150--Sobic002G208500 Sobic003G276700--Sobic004G070150 Sobic009G049100 Sobic009G049100 Sobic003G276700--Sobic009G049100 Sobic003G276700--Sobic010G084900 Sobic008G024700 Sobic008G024700 Sobic003G276700--Sobic008G024700 Sobic002G142350 Sobic002G142350 Sobic003G276700--Sobic002G142350 Sobic003G276700--Sobic001G296600 Sobic004G223350 Sobic004G223350 Sobic003G276700--Sobic004G223350 Sobic003G276700--Sobic007G016200 Sobic003G267600 Sobic003G267600 Sobic003G276700--Sobic003G267600 Sobic010G184201 Sobic010G184201 Sobic002G107700--Sobic010G184201 Sobic002G107700--Sobic004G237900 Sobic002G107700--Sobic004G070150 Sobic002G107700--Sobic003G399800 Sobic001G385132 Sobic001G385132 Sobic002G107700--Sobic001G385132 Sobic002G315450 Sobic002G315450 Sobic002G107700--Sobic002G315450 Sobic002G208301 Sobic002G208301 Sobic002G107700--Sobic002G208301 Sobic007G038200 Sobic007G038200 Sobic002G107700--Sobic007G038200 Sobic002G107700--Sobic003G276700 Sobic003G399800--Sobic004G237900 Sobic004G258450 Sobic004G258450 Sobic003G399800--Sobic004G258450 Sobic001G245100 Sobic001G245100 Sobic003G399800--Sobic001G245100 Sobic003G399800--Sobic009G049100 Sobic003G399800--Sobic002G107700 Sobic003G399800--Sobic004G070150 Sobic003G399800--Sobic007G052000 Sobic003G298000 Sobic003G298000 Sobic003G399800--Sobic003G298000 Sobic003G336300 Sobic003G336300 Sobic003G399800--Sobic003G336300 Sobic004G237900--Sobic003G399800 Sobic004G237900--Sobic004G258450 Sobic004G237900--Sobic001G245100 Sobic004G237900--Sobic002G107700 Sobic008G132550 Sobic008G132550 Sobic004G237900--Sobic008G132550 Sobic004G237900--Sobic010G184201 Sobic004G237900--Sobic004G070150 Sobic004G237900--Sobic009G049100 Sobic004G237900--Sobic001G385132 Sobic007G137750--Sobic010G054150 Sobic002G290800 Sobic002G290800 Sobic007G137750--Sobic002G290800 Sobic006G165501 Sobic006G165501 Sobic007G137750--Sobic006G165501 Sobic003G001650 Sobic003G001650 Sobic007G137750--Sobic003G001650 Sobic007G137750--Sobic006G248450 Sobic007G137750--Sobic004G070150 Sobic006G268100 Sobic006G268100 Sobic007G137750--Sobic006G268100 Sobic010G042300 Sobic010G042300 Sobic007G137750--Sobic010G042300 Sobic003G304000 Sobic003G304000 Sobic007G137750--Sobic003G304000 Sobic001G460150 Sobic001G460150 Sobic010G084900--Sobic001G460150 Sobic010G084900--Sobic003G276700 Sobic010G084900--Sobic009G049100 Sobic010G084900--Sobic001G296600 Sobic010G084900--Sobic004G070150 Sobic010G084900--Sobic004G223350 Sobic009G252500 Sobic009G252500 Sobic010G084900--Sobic009G252500 Sobic010G084900--Sobic008G024700 Sobic007G046600 Sobic007G046600 Sobic010G084900--Sobic007G046600 Sobic007G052000--Sobic010G054150 Sobic007G052000--Sobic001G245100 Sobic003G335000 Sobic003G335000 Sobic007G052000--Sobic003G335000 Sobic009G186300 Sobic009G186300 Sobic007G052000--Sobic009G186300 Sobic008G170800 Sobic008G170800 Sobic007G052000--Sobic008G170800 Sobic002G309300 Sobic002G309300 Sobic007G052000--Sobic002G309300 Sobic007G052000--Sobic006G248450 Sobic008G142200 Sobic008G142200 Sobic007G052000--Sobic008G142200 Sobic001G191500 Sobic001G191500 Sobic007G052000--Sobic001G191500 Sobic001G104050 Sobic001G104050 Sobic001G296600--Sobic001G104050 Sobic007G044350 Sobic007G044350 Sobic001G296600--Sobic007G044350 Sobic001G296600--Sobic004G223350 Sobic004G357600 Sobic004G357600 Sobic001G296600--Sobic004G357600 Sobic001G296600--Sobic003G267600 Sobic007G173901 Sobic007G173901 Sobic001G296600--Sobic007G173901 Sobic004G205900 Sobic004G205900 Sobic001G296600--Sobic004G205900 Sobic001G296600--Sobic003G276700 Sobic002G008701 Sobic002G008701 Sobic001G296600--Sobic002G008701
Octagon: transcription factors


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