Gene annotation
Transcriptome id Sobic.001G460150.1
Synonym -
Functional annotation -
UniProt A0A1Z5SAT1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G049100 - -
2 Sobic.008G024700 DUF567 domain containing protein, putative, expressed -
3 Sobic.004G258450 - -
4 Sobic.003G336300 C2 domain containing protein, putative, expressed -
5 Sobic.010G084900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@protein kinase family protein, putative, expressed -
6 Sobic.004G190800 galactosyltransferase family protein, putative, expressed K14413: beta-1,3-galactosyltransferase
7 Sobic.004G144300 - -
8 Sobic.007G046600 - -
9 Sobic.003G298000 - -
10 Sobic.006G121200 high affinity nitrate transporter, putative, expressed -
11 Sobic.009G252500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial chaperone BCS1, putative, expressed K08900: mitochondrial chaperone BCS1
12 Sobic.002G013600 expressed protein -
13 Sobic.001G010900 OsGrx_S14 - glutaredoxin subgroup II, expressed K07390: grxD, monothiol glutaredoxin
14 Sobic.001G350800 - -
15 Sobic.003G399800 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
16 Sobic.002G346250 - -
17 Sobic.002G429200 expressed protein -
18 Sobic.001G071700 protein kinase family protein, putative, expressed -
19 Sobic.004G310400 zinc finger, C3HC4 type domain containing protein, expressed K11982: E3 ubiquitin-protein ligase RNF115/126
20 Sobic.003G276700 "domain confirmed by Pfam database, expressed in flower, expression induced by IAA and ABA treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein


Gene co-expression network
sample Sobic001G460150 Sobic001G460150 Sobic009G049100 Sobic009G049100 Sobic001G460150--Sobic009G049100 Sobic008G024700 Sobic008G024700 Sobic001G460150--Sobic008G024700 Sobic004G258450 Sobic004G258450 Sobic001G460150--Sobic004G258450 Sobic003G336300 Sobic003G336300 Sobic001G460150--Sobic003G336300 Sobic010G084900 Sobic010G084900 Sobic001G460150--Sobic010G084900 Sobic004G190800 Sobic004G190800 Sobic001G460150--Sobic004G190800 Sobic004G144300 Sobic004G144300 Sobic001G460150--Sobic004G144300 Sobic007G046600 Sobic007G046600 Sobic001G460150--Sobic007G046600 Sobic003G298000 Sobic003G298000 Sobic001G460150--Sobic003G298000 Sobic009G049100--Sobic008G024700 Sobic009G049100--Sobic001G460150 Sobic009G049100--Sobic003G336300 Sobic009G049100--Sobic004G190800 Sobic009G049100--Sobic004G144300 Sobic009G252500 Sobic009G252500 Sobic009G049100--Sobic009G252500 Sobic009G049100--Sobic003G298000 Sobic004G310400 Sobic004G310400 Sobic009G049100--Sobic004G310400 Sobic009G049100--Sobic007G046600 Sobic008G024700--Sobic009G049100 Sobic008G024700--Sobic001G460150 Sobic008G024700--Sobic004G190800 Sobic006G121200 Sobic006G121200 Sobic008G024700--Sobic006G121200 Sobic002G360701 Sobic002G360701 Sobic008G024700--Sobic002G360701 Sobic008G024700--Sobic003G336300 Sobic001G513900 Sobic001G513900 Sobic008G024700--Sobic001G513900 Sobic001G487250 Sobic001G487250 Sobic008G024700--Sobic001G487250 Sobic004G223350 Sobic004G223350 Sobic008G024700--Sobic004G223350 Sobic004G237900 Sobic004G237900 Sobic004G258450--Sobic004G237900 Sobic003G399800 Sobic003G399800 Sobic004G258450--Sobic003G399800 Sobic004G258450--Sobic003G336300 Sobic004G258450--Sobic001G460150 Sobic004G258450--Sobic009G049100 Sobic004G258450--Sobic003G298000 Sobic002G429200 Sobic002G429200 Sobic004G258450--Sobic002G429200 Sobic004G258450--Sobic004G144300 Sobic004G070150 Sobic004G070150 Sobic004G258450--Sobic004G070150 Sobic003G336300--Sobic009G049100 Sobic003G336300--Sobic004G258450 Sobic003G336300--Sobic001G460150 Sobic003G336300--Sobic004G310400 Sobic003G336300--Sobic004G144300 Sobic003G336300--Sobic008G024700 Sobic003G336300--Sobic006G121200 Sobic003G336300--Sobic003G298000 Sobic003G336300--Sobic003G399800 Sobic010G084900--Sobic001G460150 Sobic003G276700 Sobic003G276700 Sobic010G084900--Sobic003G276700 Sobic010G084900--Sobic009G049100 Sobic001G296600 Sobic001G296600 Sobic010G084900--Sobic001G296600 Sobic010G084900--Sobic004G070150 Sobic010G084900--Sobic004G223350 Sobic010G084900--Sobic009G252500 Sobic010G084900--Sobic008G024700 Sobic010G084900--Sobic007G046600 Sobic002G013600 Sobic002G013600 Sobic004G190800--Sobic002G013600 Sobic001G312801 Sobic001G312801 Sobic004G190800--Sobic001G312801 Sobic004G190800--Sobic009G049100 Sobic004G190800--Sobic002G360701 Sobic007G061500 Sobic007G061500 Sobic004G190800--Sobic007G061500 Sobic001G350800 Sobic001G350800 Sobic004G190800--Sobic001G350800 Sobic004G314100 Sobic004G314100 Sobic004G190800--Sobic004G314100 Sobic004G288900 Sobic004G288900 Sobic004G190800--Sobic004G288900 Sobic002G346250 Sobic002G346250 Sobic004G190800--Sobic002G346250 Sobic004G144300--Sobic004G310400 Sobic003G362800 Sobic003G362800 Sobic004G144300--Sobic003G362800 Sobic001G113400 Sobic001G113400 Sobic004G144300--Sobic001G113400 Sobic005G048800 Sobic005G048800 Sobic004G144300--Sobic005G048800 Sobic001G520000 Sobic001G520000 Sobic004G144300--Sobic001G520000 Sobic002G085600 Sobic002G085600 Sobic004G144300--Sobic002G085600 Sobic003G118500 Sobic003G118500 Sobic004G144300--Sobic003G118500 Sobic004G144300--Sobic009G049100 Sobic001G096200 Sobic001G096200 Sobic004G144300--Sobic001G096200 Sobic007G046600--Sobic009G252500 Sobic007G046600--Sobic003G298000 Sobic002G209450 Sobic002G209450 Sobic007G046600--Sobic002G209450 Sobic003G241600 Sobic003G241600 Sobic007G046600--Sobic003G241600 Sobic008G170800 Sobic008G170800 Sobic007G046600--Sobic008G170800 Sobic004G053600 Sobic004G053600 Sobic007G046600--Sobic004G053600 Sobic003G155000 Sobic003G155000 Sobic007G046600--Sobic003G155000 Sobic007G046600--Sobic004G190800 Sobic001G010900 Sobic001G010900 Sobic007G046600--Sobic001G010900 Sobic003G298000--Sobic009G252500 Sobic001G494400 Sobic001G494400 Sobic003G298000--Sobic001G494400 Sobic003G298000--Sobic007G046600 Sobic003G298000--Sobic002G209450 Sobic003G298000--Sobic001G010900 Sobic003G298000--Sobic009G049100 Sobic003G298000--Sobic004G144300 Sobic003G298000--Sobic004G310400 Sobic003G298000--Sobic001G520000
Octagon: transcription factors


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