Gene annotation
Transcriptome id Sobic.007G044350.1
Synonym -
Functional annotation -
UniProt A0A1Z5R825
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G296600 - -
2 Sobic.004G060000 DUF630/DUF632 domains containing protein, putative, expressed -
3 Sobic.010G217466 - -
4 Sobic.001G104050 - -
5 Sobic.006G108900 pentatricopeptide, putative, expressed -
6 Sobic.002G262500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@osFTL4 FT-Like4 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
7 Sobic.003G276700 "domain confirmed by Pfam database, expressed in flower, expression induced by IAA and ABA treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein
8 Sobic.006G119100 expressed protein -
9 Sobic.004G357600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Sucrose synthase genes(PubMedID : 24456189)@sucrose synthase(PubMedID : 26616172)@Sugar synthesis(PubMedID : 27330561)@sucrose synthase, putative, expressed K00695: sucrose synthase
10 Sobic.004G223350 - -
11 Sobic.002G411700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
12 Sobic.008G086100 - -
13 Sobic.002G427201 - -
14 Sobic.003G267600 potassium channel protein, putative, expressed -
15 Sobic.004G070150 - -
16 Sobic.010G084900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@protein kinase family protein, putative, expressed -
17 Sobic.005G222000 protein transporter, putative, expressed -
18 Sobic.001G396550 - -
19 Sobic.007G206600 - -
20 Sobic.006G233200 - -


Gene co-expression network
sample Sobic007G044350 Sobic007G044350 Sobic001G296600 Sobic001G296600 Sobic007G044350--Sobic001G296600 Sobic004G060000 Sobic004G060000 Sobic007G044350--Sobic004G060000 Sobic010G217466 Sobic010G217466 Sobic007G044350--Sobic010G217466 Sobic001G104050 Sobic001G104050 Sobic007G044350--Sobic001G104050 Sobic006G108900 Sobic006G108900 Sobic007G044350--Sobic006G108900 Sobic002G262500 Sobic002G262500 Sobic007G044350--Sobic002G262500 Sobic003G276700 Sobic003G276700 Sobic007G044350--Sobic003G276700 Sobic006G119100 Sobic006G119100 Sobic007G044350--Sobic006G119100 Sobic004G357600 Sobic004G357600 Sobic007G044350--Sobic004G357600 Sobic001G296600--Sobic001G104050 Sobic001G296600--Sobic007G044350 Sobic004G223350 Sobic004G223350 Sobic001G296600--Sobic004G223350 Sobic001G296600--Sobic004G357600 Sobic003G267600 Sobic003G267600 Sobic001G296600--Sobic003G267600 Sobic007G173901 Sobic007G173901 Sobic001G296600--Sobic007G173901 Sobic004G205900 Sobic004G205900 Sobic001G296600--Sobic004G205900 Sobic001G296600--Sobic003G276700 Sobic002G008701 Sobic002G008701 Sobic001G296600--Sobic002G008701 Sobic004G060000--Sobic007G044350 Sobic001G278400 Sobic001G278400 Sobic004G060000--Sobic001G278400 Sobic006G233200 Sobic006G233200 Sobic004G060000--Sobic006G233200 Sobic001G036400 Sobic001G036400 Sobic004G060000--Sobic001G036400 Sobic002G411700 Sobic002G411700 Sobic004G060000--Sobic002G411700 Sobic001G378900 Sobic001G378900 Sobic004G060000--Sobic001G378900 Sobic006G116600 Sobic006G116600 Sobic004G060000--Sobic006G116600 Sobic001G276500 Sobic001G276500 Sobic004G060000--Sobic001G276500 Sobic004G060000--Sobic001G104050 Sobic009G221701 Sobic009G221701 Sobic010G217466--Sobic009G221701 Sobic002G149550 Sobic002G149550 Sobic010G217466--Sobic002G149550 Sobic006G242600 Sobic006G242600 Sobic010G217466--Sobic006G242600 Sobic003G396400 Sobic003G396400 Sobic010G217466--Sobic003G396400 Sobic002G429200 Sobic002G429200 Sobic010G217466--Sobic002G429200 Sobic010G217466--Sobic006G116600 Sobic002G285950 Sobic002G285950 Sobic010G217466--Sobic002G285950 Sobic010G149900 Sobic010G149900 Sobic010G217466--Sobic010G149900 Sobic001G378150 Sobic001G378150 Sobic010G217466--Sobic001G378150 Sobic001G104050--Sobic001G296600 Sobic010G265400 Sobic010G265400 Sobic001G104050--Sobic010G265400 Sobic001G104050--Sobic004G357600 Sobic001G104050--Sobic002G411700 Sobic001G104050--Sobic007G044350 Sobic004G070400 Sobic004G070400 Sobic001G104050--Sobic004G070400 Sobic004G249200 Sobic004G249200 Sobic001G104050--Sobic004G249200 Sobic001G104050--Sobic001G036400 Sobic004G070150 Sobic004G070150 Sobic001G104050--Sobic004G070150 Sobic006G108900--Sobic004G249200 Sobic009G011100 Sobic009G011100 Sobic006G108900--Sobic009G011100 Sobic005G222000 Sobic005G222000 Sobic006G108900--Sobic005G222000 Sobic009G011000 Sobic009G011000 Sobic006G108900--Sobic009G011000 Sobic006G108900--Sobic007G044350 Sobic006G108900--Sobic004G357600 Sobic009G011200 Sobic009G011200 Sobic006G108900--Sobic009G011200 Sobic006G108900--Sobic001G296600 Sobic004G138100 Sobic004G138100 Sobic006G108900--Sobic004G138100 Sobic002G427201 Sobic002G427201 Sobic002G262500--Sobic002G427201 Sobic002G262500--Sobic007G173901 Sobic008G086100 Sobic008G086100 Sobic002G262500--Sobic008G086100 Sobic002G262500--Sobic006G242600 Sobic002G262500--Sobic010G217466 Sobic005G027032 Sobic005G027032 Sobic002G262500--Sobic005G027032 Sobic002G262500--Sobic009G221701 Sobic001G062400 Sobic001G062400 Sobic002G262500--Sobic001G062400 Sobic002G262500--Sobic002G429200 Sobic003G276700--Sobic004G070150 Sobic009G049100 Sobic009G049100 Sobic003G276700--Sobic009G049100 Sobic010G084900 Sobic010G084900 Sobic003G276700--Sobic010G084900 Sobic008G024700 Sobic008G024700 Sobic003G276700--Sobic008G024700 Sobic002G142350 Sobic002G142350 Sobic003G276700--Sobic002G142350 Sobic003G276700--Sobic001G296600 Sobic003G276700--Sobic004G223350 Sobic007G016200 Sobic007G016200 Sobic003G276700--Sobic007G016200 Sobic003G276700--Sobic003G267600 Sobic007G038200 Sobic007G038200 Sobic006G119100--Sobic007G038200 Sobic002G380150 Sobic002G380150 Sobic006G119100--Sobic002G380150 Sobic007G174701 Sobic007G174701 Sobic006G119100--Sobic007G174701 Sobic002G315450 Sobic002G315450 Sobic006G119100--Sobic002G315450 Sobic007G206600 Sobic007G206600 Sobic006G119100--Sobic007G206600 Sobic006G119100--Sobic007G044350 Sobic006G119100--Sobic001G296600 Sobic006G119100--Sobic008G086100 Sobic006G045301 Sobic006G045301 Sobic006G119100--Sobic006G045301 Sobic004G357600--Sobic004G249200 Sobic004G357600--Sobic001G296600 Sobic004G357600--Sobic001G104050 Sobic004G357600--Sobic005G222000 Sobic007G174500 Sobic007G174500 Sobic004G357600--Sobic007G174500 Sobic007G174000 Sobic007G174000 Sobic004G357600--Sobic007G174000 Sobic004G357600--Sobic004G138100 Sobic004G357600--Sobic010G265400 Sobic004G357600--Sobic009G011100
Octagon: transcription factors


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