Gene annotation
Transcriptome id Sobic.005G222000.1
Synonym Sb05g027171
Functional annotation protein transporter, putative, expressed
UniProt A0A1B6PU25
Pfam -
Panther DB PTHR10997 PTHR10997:SF29
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G17340 : ARM repeat superfamily protein
RAP-DB (Rice) LOC_Os11g47320.1 : protein transporter, putative, expressed
MaizeGDB (Corn) Zm00025a011285 , Zm00025a015582 , Zm00025a014825 , Zm00025a029110 , Zm00025a003862 , Zm00025a003863 , Zm00025a050907 , Zm00025a018289
Brachypodium KQK24227 , KQJ87209
Barley HORVU4Hr1G028610.19 , HORVU4Hr1G028610.18 , HORVU4Hr1G028610.11 , HORVU4Hr1G028610.10 , HORVU4Hr1G028610.13 , HORVU4Hr1G028610.15 , HORVU4Hr1G028610.14 , HORVU4Hr1G028610.17 , HORVU4Hr1G028610.16 , HORVU4Hr1G028610.9 , HORVU4Hr1G028610.8 , HORVU4Hr1G028610.5 , HORVU4Hr1G028610.4 , HORVU4Hr1G028610.7 , HORVU4Hr1G028610.6 , HORVU4Hr1G028610.1 , HORVU4Hr1G028610.3 , HORVU4Hr1G028610.2 , HORVU4Hr1G028610.12
Wheat TraesCS4B02G144100 , TraesCS4B02G144100 , TraesCS4D02G142700 , TraesCS4A02G172400 , TraesCS4D02G142700 , TraesCS4D02G142700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G249200 NADPH-dependent oxidoreductase, putative, expressed K03883: NADH-ubiquinone oxidoreductase chain 5
2 Sobic.006G108900 pentatricopeptide, putative, expressed -
3 Sobic.004G357600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Sucrose synthase genes(PubMedID : 24456189)@sucrose synthase(PubMedID : 26616172)@Sugar synthesis(PubMedID : 27330561)@sucrose synthase, putative, expressed K00695: sucrose synthase
4 Sobic.009G011100 SCARECROW, putative, expressed -
5 Sobic.003G267600 potassium channel protein, putative, expressed -
6 Sobic.001G296600 - -
7 Sobic.010G155000 NAC domain containing protein, putative, expressed -
8 Sobic.009G192400 - -
9 Sobic.001G036400 expressed protein -
10 Sobic.004G138100 expressed protein -
11 Sobic.008G085800 - -
12 Sobic.010G265400 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
13 Sobic.007G225050 - -
14 Sobic.009G011000 SCARECROW, putative, expressed -
15 Sobic.007G174500 carrier, putative, expressed -
16 Sobic.007G078900 - -
17 Sobic.001G104050 - -
18 Sobic.001G283400 CSLD1 - cellulose synthase-like family D, expressed -
19 Sobic.003G276700 "domain confirmed by Pfam database, expressed in flower, expression induced by IAA and ABA treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein
20 Sobic.007G038200 lectin-like receptor kinase, putative, expressed -


Gene co-expression network
sample Sobic005G222000 Sobic005G222000 Sobic004G249200 Sobic004G249200 Sobic005G222000--Sobic004G249200 Sobic006G108900 Sobic006G108900 Sobic005G222000--Sobic006G108900 Sobic004G357600 Sobic004G357600 Sobic005G222000--Sobic004G357600 Sobic009G011100 Sobic009G011100 Sobic005G222000--Sobic009G011100 Sobic003G267600 Sobic003G267600 Sobic005G222000--Sobic003G267600 Sobic001G296600 Sobic001G296600 Sobic005G222000--Sobic001G296600 Sobic010G155000 Sobic010G155000 Sobic005G222000--Sobic010G155000 Sobic009G192400 Sobic009G192400 Sobic005G222000--Sobic009G192400 Sobic001G036400 Sobic001G036400 Sobic005G222000--Sobic001G036400 Sobic004G249200--Sobic006G108900 Sobic004G249200--Sobic005G222000 Sobic004G249200--Sobic004G357600 Sobic004G249200--Sobic009G011100 Sobic004G138100 Sobic004G138100 Sobic004G249200--Sobic004G138100 Sobic002G290900 Sobic002G290900 Sobic004G249200--Sobic002G290900 Sobic004G249200--Sobic001G296600 Sobic009G011000 Sobic009G011000 Sobic004G249200--Sobic009G011000 Sobic009G011200 Sobic009G011200 Sobic004G249200--Sobic009G011200 Sobic006G108900--Sobic004G249200 Sobic006G108900--Sobic009G011100 Sobic006G108900--Sobic005G222000 Sobic006G108900--Sobic009G011000 Sobic007G044350 Sobic007G044350 Sobic006G108900--Sobic007G044350 Sobic006G108900--Sobic004G357600 Sobic006G108900--Sobic009G011200 Sobic006G108900--Sobic001G296600 Sobic006G108900--Sobic004G138100 Sobic004G357600--Sobic004G249200 Sobic004G357600--Sobic001G296600 Sobic001G104050 Sobic001G104050 Sobic004G357600--Sobic001G104050 Sobic004G357600--Sobic005G222000 Sobic007G174500 Sobic007G174500 Sobic004G357600--Sobic007G174500 Sobic007G174000 Sobic007G174000 Sobic004G357600--Sobic007G174000 Sobic004G357600--Sobic004G138100 Sobic010G265400 Sobic010G265400 Sobic004G357600--Sobic010G265400 Sobic004G357600--Sobic009G011100 Sobic009G011100--Sobic009G011000 Sobic010G142501 Sobic010G142501 Sobic009G011100--Sobic010G142501 Sobic009G011100--Sobic004G138100 Sobic009G011100--Sobic007G174500 Sobic009G011100--Sobic009G011200 Sobic007G190600 Sobic007G190600 Sobic009G011100--Sobic007G190600 Sobic009G011100--Sobic004G249200 Sobic009G011100--Sobic006G108900 Sobic007G190466 Sobic007G190466 Sobic009G011100--Sobic007G190466 Sobic004G205900 Sobic004G205900 Sobic003G267600--Sobic004G205900 Sobic003G267600--Sobic009G192400 Sobic002G226200 Sobic002G226200 Sobic003G267600--Sobic002G226200 Sobic001G283400 Sobic001G283400 Sobic003G267600--Sobic001G283400 Sobic007G016200 Sobic007G016200 Sobic003G267600--Sobic007G016200 Sobic007G206400 Sobic007G206400 Sobic003G267600--Sobic007G206400 Sobic007G078900 Sobic007G078900 Sobic003G267600--Sobic007G078900 Sobic003G267600--Sobic010G155000 Sobic009G199750 Sobic009G199750 Sobic003G267600--Sobic009G199750 Sobic001G296600--Sobic001G104050 Sobic001G296600--Sobic007G044350 Sobic004G223350 Sobic004G223350 Sobic001G296600--Sobic004G223350 Sobic001G296600--Sobic004G357600 Sobic001G296600--Sobic003G267600 Sobic007G173901 Sobic007G173901 Sobic001G296600--Sobic007G173901 Sobic001G296600--Sobic004G205900 Sobic003G276700 Sobic003G276700 Sobic001G296600--Sobic003G276700 Sobic002G008701 Sobic002G008701 Sobic001G296600--Sobic002G008701 Sobic004G180950 Sobic004G180950 Sobic010G155000--Sobic004G180950 Sobic010G155000--Sobic001G283400 Sobic010G155000--Sobic009G192400 Sobic002G200400 Sobic002G200400 Sobic010G155000--Sobic002G200400 Sobic010G155000--Sobic009G199750 Sobic010G155000--Sobic007G206400 Sobic002G256250 Sobic002G256250 Sobic010G155000--Sobic002G256250 Sobic010G254401 Sobic010G254401 Sobic010G155000--Sobic010G254401 Sobic006G041200 Sobic006G041200 Sobic010G155000--Sobic006G041200 Sobic009G192400--Sobic010G155000 Sobic009G192400--Sobic003G267600 Sobic003G334400 Sobic003G334400 Sobic009G192400--Sobic003G334400 Sobic009G192400--Sobic001G283400 Sobic007G182300 Sobic007G182300 Sobic009G192400--Sobic007G182300 Sobic009G192400--Sobic006G041200 Sobic009G192400--Sobic007G206400 Sobic007G203800 Sobic007G203800 Sobic009G192400--Sobic007G203800 Sobic006G128150 Sobic006G128150 Sobic009G192400--Sobic006G128150 Sobic001G036400--Sobic006G128150 Sobic001G036400--Sobic002G256250 Sobic001G036400--Sobic010G265400 Sobic001G036400--Sobic010G155000 Sobic001G431600 Sobic001G431600 Sobic001G036400--Sobic001G431600 Sobic001G378900 Sobic001G378900 Sobic001G036400--Sobic001G378900 Sobic002G053300 Sobic002G053300 Sobic001G036400--Sobic002G053300 Sobic010G028333 Sobic010G028333 Sobic001G036400--Sobic010G028333 Sobic001G036400--Sobic007G190466
Octagon: transcription factors


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