Gene annotation
Transcriptome id Sobic.001G296600.1
Synonym
Functional annotation -
UniProt A0A1B6QLW7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G104050 - -
2 Sobic.007G044350 - -
3 Sobic.004G223350 - -
4 Sobic.004G357600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Sucrose synthase genes(PubMedID : 24456189)@sucrose synthase(PubMedID : 26616172)@Sugar synthesis(PubMedID : 27330561)@sucrose synthase, putative, expressed K00695: sucrose synthase
5 Sobic.003G267600 potassium channel protein, putative, expressed -
6 Sobic.007G173901 - -
7 Sobic.004G205900 - -
8 Sobic.003G276700 "domain confirmed by Pfam database, expressed in flower, expression induced by IAA and ABA treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein
9 Sobic.002G008701 - -
10 Sobic.008G132550 - -
11 Sobic.002G411700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
12 Sobic.010G084900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@protein kinase family protein, putative, expressed -
13 Sobic.009G192400 - -
14 Sobic.005G222000 protein transporter, putative, expressed -
15 Sobic.004G249200 NADPH-dependent oxidoreductase, putative, expressed K03883: NADH-ubiquinone oxidoreductase chain 5
16 Sobic.004G070150 - -
17 Sobic.010G265400 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
18 Sobic.008G086100 - -
19 Sobic.007G206400 - -
20 Sobic.002G262500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@osFTL4 FT-Like4 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T


Gene co-expression network
sample Sobic001G296600 Sobic001G296600 Sobic001G104050 Sobic001G104050 Sobic001G296600--Sobic001G104050 Sobic007G044350 Sobic007G044350 Sobic001G296600--Sobic007G044350 Sobic004G223350 Sobic004G223350 Sobic001G296600--Sobic004G223350 Sobic004G357600 Sobic004G357600 Sobic001G296600--Sobic004G357600 Sobic003G267600 Sobic003G267600 Sobic001G296600--Sobic003G267600 Sobic007G173901 Sobic007G173901 Sobic001G296600--Sobic007G173901 Sobic004G205900 Sobic004G205900 Sobic001G296600--Sobic004G205900 Sobic003G276700 Sobic003G276700 Sobic001G296600--Sobic003G276700 Sobic002G008701 Sobic002G008701 Sobic001G296600--Sobic002G008701 Sobic001G104050--Sobic001G296600 Sobic010G265400 Sobic010G265400 Sobic001G104050--Sobic010G265400 Sobic001G104050--Sobic004G357600 Sobic002G411700 Sobic002G411700 Sobic001G104050--Sobic002G411700 Sobic001G104050--Sobic007G044350 Sobic004G070400 Sobic004G070400 Sobic001G104050--Sobic004G070400 Sobic004G249200 Sobic004G249200 Sobic001G104050--Sobic004G249200 Sobic001G036400 Sobic001G036400 Sobic001G104050--Sobic001G036400 Sobic004G070150 Sobic004G070150 Sobic001G104050--Sobic004G070150 Sobic007G044350--Sobic001G296600 Sobic004G060000 Sobic004G060000 Sobic007G044350--Sobic004G060000 Sobic010G217466 Sobic010G217466 Sobic007G044350--Sobic010G217466 Sobic007G044350--Sobic001G104050 Sobic006G108900 Sobic006G108900 Sobic007G044350--Sobic006G108900 Sobic002G262500 Sobic002G262500 Sobic007G044350--Sobic002G262500 Sobic007G044350--Sobic003G276700 Sobic006G119100 Sobic006G119100 Sobic007G044350--Sobic006G119100 Sobic007G044350--Sobic004G357600 Sobic004G223350--Sobic007G173901 Sobic008G086100 Sobic008G086100 Sobic004G223350--Sobic008G086100 Sobic004G223350--Sobic002G008701 Sobic007G203850 Sobic007G203850 Sobic004G223350--Sobic007G203850 Sobic002G346250 Sobic002G346250 Sobic004G223350--Sobic002G346250 Sobic003G241600 Sobic003G241600 Sobic004G223350--Sobic003G241600 Sobic002G142350 Sobic002G142350 Sobic004G223350--Sobic002G142350 Sobic004G223350--Sobic001G296600 Sobic008G096300 Sobic008G096300 Sobic004G223350--Sobic008G096300 Sobic004G357600--Sobic004G249200 Sobic004G357600--Sobic001G296600 Sobic004G357600--Sobic001G104050 Sobic005G222000 Sobic005G222000 Sobic004G357600--Sobic005G222000 Sobic007G174500 Sobic007G174500 Sobic004G357600--Sobic007G174500 Sobic007G174000 Sobic007G174000 Sobic004G357600--Sobic007G174000 Sobic004G138100 Sobic004G138100 Sobic004G357600--Sobic004G138100 Sobic004G357600--Sobic010G265400 Sobic009G011100 Sobic009G011100 Sobic004G357600--Sobic009G011100 Sobic003G267600--Sobic004G205900 Sobic009G192400 Sobic009G192400 Sobic003G267600--Sobic009G192400 Sobic002G226200 Sobic002G226200 Sobic003G267600--Sobic002G226200 Sobic001G283400 Sobic001G283400 Sobic003G267600--Sobic001G283400 Sobic007G016200 Sobic007G016200 Sobic003G267600--Sobic007G016200 Sobic007G206400 Sobic007G206400 Sobic003G267600--Sobic007G206400 Sobic007G078900 Sobic007G078900 Sobic003G267600--Sobic007G078900 Sobic010G155000 Sobic010G155000 Sobic003G267600--Sobic010G155000 Sobic009G199750 Sobic009G199750 Sobic003G267600--Sobic009G199750 Sobic007G173901--Sobic004G223350 Sobic007G173901--Sobic008G086100 Sobic007G173901--Sobic002G262500 Sobic007G173901--Sobic001G296600 Sobic008G024700 Sobic008G024700 Sobic007G173901--Sobic008G024700 Sobic008G175600 Sobic008G175600 Sobic007G173901--Sobic008G175600 Sobic007G173901--Sobic002G008701 Sobic001G062400 Sobic001G062400 Sobic007G173901--Sobic001G062400 Sobic007G173901--Sobic002G346250 Sobic004G205900--Sobic003G267600 Sobic004G205900--Sobic009G192400 Sobic007G203800 Sobic007G203800 Sobic004G205900--Sobic007G203800 Sobic007G046600 Sobic007G046600 Sobic004G205900--Sobic007G046600 Sobic004G205900--Sobic003G241600 Sobic007G089566 Sobic007G089566 Sobic004G205900--Sobic007G089566 Sobic004G118000 Sobic004G118000 Sobic004G205900--Sobic004G118000 Sobic009G252500 Sobic009G252500 Sobic004G205900--Sobic009G252500 Sobic004G205900--Sobic007G206400 Sobic003G276700--Sobic004G070150 Sobic009G049100 Sobic009G049100 Sobic003G276700--Sobic009G049100 Sobic010G084900 Sobic010G084900 Sobic003G276700--Sobic010G084900 Sobic003G276700--Sobic008G024700 Sobic003G276700--Sobic002G142350 Sobic003G276700--Sobic001G296600 Sobic003G276700--Sobic004G223350 Sobic003G276700--Sobic007G016200 Sobic003G276700--Sobic003G267600 Sobic002G008701--Sobic004G223350 Sobic002G008701--Sobic007G203850 Sobic007G016300 Sobic007G016300 Sobic002G008701--Sobic007G016300 Sobic003G015800 Sobic003G015800 Sobic002G008701--Sobic003G015800 Sobic002G008701--Sobic008G175600 Sobic008G112400 Sobic008G112400 Sobic002G008701--Sobic008G112400 Sobic005G083866 Sobic005G083866 Sobic002G008701--Sobic005G083866 Sobic002G331200 Sobic002G331200 Sobic002G008701--Sobic002G331200 Sobic002G008701--Sobic001G296600
Octagon: transcription factors


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