Gene annotation
Transcriptome id Sobic.004G173200.2
Synonym 1, AMT2, Sb04g022390, ATAMT2
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
ammonium transporter protein, putative, expressed
UniProt A0A1Z5RN39 , C5XU62
Pfam PF00909
Panther DB PTHR11730 PTHR11730:SF59
NCBI CDD -
KEGG Orthology K03320; amt, AMT, ammonium transporter, Amt family
Gene Ontology GO:0016020; membrane GO:0015696ammonium transport GO:0008519ammonium transmembrane transporter activity


Orthologs (automatic annotation)
TAIR AT2G38290 : ammonium transporter 2
RAP-DB (Rice) LOC_Os02g34580.1 : ammonium transporter protein, putative, expressed
MaizeGDB (Corn) Zm00025a020615 , Zm00025a043934 , Zm00025a008959
Brachypodium KQK10804 , KQK10805 , KQJ99831
Barley HORVU3Hr1G082540.2 , HORVU3Hr1G082540.1 , HORVU3Hr1G087690.2 , HORVU3Hr1G087690.1 , HORVU5Hr1G118590.8 , HORVU5Hr1G118590.7 , HORVU5Hr1G118590.6 , HORVU5Hr1G118590.2 , HORVU5Hr1G118590.1 , HORVU0Hr1G014360.2 , HORVU0Hr1G014360.3 , HORVU0Hr1G014360.1 , HORVU3Hr1G082610.2 , HORVU3Hr1G082610.1
Wheat TraesCS3A02G350800 , TraesCS3D02G344800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G000200 expressed protein -
2 Sobic.003G262600 OsWAK10d - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed -
3 Sobic.002G398600 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
4 Sobic.001G370800 - -
5 Sobic.002G187900 expressed protein -
6 Sobic.003G362800 - -
7 Sobic.006G249600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
8 Sobic.001G212900 FHA domain containing protein, putative, expressed K10867: NBN, nibrin
9 Sobic.002G001500 pentatricopeptide containing protein, putative, expressed -
10 Sobic.002G110600 regulatory protein, putative, expressed -
11 Sobic.008G192900 -(PubMedID : 29751546)@sodium/hydrogen exchanger 7, putative, expressed -
12 Sobic.008G103400 universal stress protein domain containing protein, putative, expressed -
13 Sobic.010G012200 - K00851: E2.7.1.12, gntK, gluconokinase
14 Sobic.001G492400 male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
15 Sobic.009G223900 protein binding protein, putative, expressed -
16 Sobic.003G263900 reticulon domain containing protein, putative, expressed -
17 Sobic.001G503700 DUF677 domain containing protein, putative, expressed -
18 Sobic.006G255200 - -
19 Sobic.003G155000 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
20 Sobic.004G218400 - -


Gene co-expression network
sample Sobic004G173200 Sobic004G173200 Sobic010G000200 Sobic010G000200 Sobic004G173200--Sobic010G000200 Sobic003G262600 Sobic003G262600 Sobic004G173200--Sobic003G262600 Sobic002G398600 Sobic002G398600 Sobic004G173200--Sobic002G398600 Sobic001G370800 Sobic001G370800 Sobic004G173200--Sobic001G370800 Sobic002G187900 Sobic002G187900 Sobic004G173200--Sobic002G187900 Sobic003G362800 Sobic003G362800 Sobic004G173200--Sobic003G362800 Sobic006G249600 Sobic006G249600 Sobic004G173200--Sobic006G249600 Sobic001G212900 Sobic001G212900 Sobic004G173200--Sobic001G212900 Sobic002G001500 Sobic002G001500 Sobic004G173200--Sobic002G001500 Sobic010G000200--Sobic004G173200 Sobic010G012200 Sobic010G012200 Sobic010G000200--Sobic010G012200 Sobic010G000200--Sobic003G362800 Sobic010G000200--Sobic001G212900 Sobic003G155000 Sobic003G155000 Sobic010G000200--Sobic003G155000 Sobic010G000200--Sobic003G262600 Sobic010G000200--Sobic001G370800 Sobic010G000200--Sobic002G187900 Sobic003G225200 Sobic003G225200 Sobic010G000200--Sobic003G225200 Sobic003G262600--Sobic003G155000 Sobic003G262600--Sobic004G173200 Sobic003G253700 Sobic003G253700 Sobic003G262600--Sobic003G253700 Sobic003G262600--Sobic006G249600 Sobic003G262600--Sobic010G000200 Sobic003G262600--Sobic002G187900 Sobic003G365200 Sobic003G365200 Sobic003G262600--Sobic003G365200 Sobic009G223900 Sobic009G223900 Sobic003G262600--Sobic009G223900 Sobic003G262600--Sobic003G362800 Sobic002G398600--Sobic006G249600 Sobic002G398600--Sobic004G173200 Sobic003G263900 Sobic003G263900 Sobic002G398600--Sobic003G263900 Sobic002G398600--Sobic002G187900 Sobic002G398600--Sobic009G223900 Sobic008G192900 Sobic008G192900 Sobic002G398600--Sobic008G192900 Sobic002G398600--Sobic001G212900 Sobic008G103400 Sobic008G103400 Sobic002G398600--Sobic008G103400 Sobic008G016800 Sobic008G016800 Sobic002G398600--Sobic008G016800 Sobic009G026600 Sobic009G026600 Sobic001G370800--Sobic009G026600 Sobic001G370800--Sobic004G173200 Sobic001G038700 Sobic001G038700 Sobic001G370800--Sobic001G038700 Sobic001G442000 Sobic001G442000 Sobic001G370800--Sobic001G442000 Sobic002G309300 Sobic002G309300 Sobic001G370800--Sobic002G309300 Sobic009G088300 Sobic009G088300 Sobic001G370800--Sobic009G088300 Sobic004G218400 Sobic004G218400 Sobic001G370800--Sobic004G218400 Sobic006G255200 Sobic006G255200 Sobic001G370800--Sobic006G255200 Sobic001G370800--Sobic003G263900 Sobic002G187900--Sobic003G263900 Sobic002G187900--Sobic006G255200 Sobic004G127600 Sobic004G127600 Sobic002G187900--Sobic004G127600 Sobic002G187900--Sobic006G249600 Sobic001G109400 Sobic001G109400 Sobic002G187900--Sobic001G109400 Sobic002G187900--Sobic001G212900 Sobic004G227700 Sobic004G227700 Sobic002G187900--Sobic004G227700 Sobic002G187900--Sobic004G173200 Sobic002G187900--Sobic002G398600 Sobic003G362800--Sobic002G001500 Sobic001G113400 Sobic001G113400 Sobic003G362800--Sobic001G113400 Sobic003G155800 Sobic003G155800 Sobic003G362800--Sobic003G155800 Sobic004G181000 Sobic004G181000 Sobic003G362800--Sobic004G181000 Sobic004G144300 Sobic004G144300 Sobic003G362800--Sobic004G144300 Sobic003G362800--Sobic008G103400 Sobic003G362800--Sobic010G000200 Sobic003G362800--Sobic004G173200 Sobic003G001650 Sobic003G001650 Sobic003G362800--Sobic003G001650 Sobic006G249600--Sobic001G212900 Sobic006G249600--Sobic002G398600 Sobic006G249600--Sobic002G187900 Sobic006G249600--Sobic003G253700 Sobic006G249600--Sobic003G155000 Sobic006G249600--Sobic003G263900 Sobic006G249600--Sobic001G109400 Sobic006G249600--Sobic004G173200 Sobic006G157450 Sobic006G157450 Sobic006G249600--Sobic006G157450 Sobic001G212900--Sobic001G109400 Sobic001G212900--Sobic006G249600 Sobic001G212900--Sobic002G187900 Sobic002G374000 Sobic002G374000 Sobic001G212900--Sobic002G374000 Sobic001G212900--Sobic010G000200 Sobic002G110600 Sobic002G110600 Sobic001G212900--Sobic002G110600 Sobic001G212900--Sobic004G127600 Sobic001G212900--Sobic004G173200 Sobic001G212900--Sobic010G012200 Sobic002G001500--Sobic003G362800 Sobic002G001500--Sobic001G113400 Sobic002G001500--Sobic004G181000 Sobic002G001500--Sobic009G223900 Sobic009G208000 Sobic009G208000 Sobic002G001500--Sobic009G208000 Sobic002G001500--Sobic008G103400 Sobic002G085600 Sobic002G085600 Sobic002G001500--Sobic002G085600 Sobic002G001500--Sobic003G155800 Sobic002G001500--Sobic004G173200
Octagon: transcription factors


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