Gene annotation
Transcriptome id Sobic.010G000200.1
Synonym Sb10g000200
Functional annotation expressed protein
UniProt C5Z213
Pfam PF05684
Panther DB PTHR34289 PTHR34289:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G52540 : Protein of unknown function (DUF819)
RAP-DB (Rice) LOC_Os06g01790.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS5D02G293200 , TraesCS5A02G285800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G173200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ammonium transporter protein, putative, expressed K03320: amt, AMT, ammonium transporter, Amt family
2 Sobic.010G012200 - K00851: E2.7.1.12, gntK, gluconokinase
3 Sobic.003G362800 - -
4 Sobic.001G212900 FHA domain containing protein, putative, expressed K10867: NBN, nibrin
5 Sobic.003G155000 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
6 Sobic.003G262600 OsWAK10d - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed -
7 Sobic.001G370800 - -
8 Sobic.002G187900 expressed protein -
9 Sobic.003G225200 CAMK_CAMK_like.9 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
10 Sobic.006G249600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
11 Sobic.008G192900 -(PubMedID : 29751546)@sodium/hydrogen exchanger 7, putative, expressed -
12 Sobic.008G103400 universal stress protein domain containing protein, putative, expressed -
13 Sobic.001G520000 auxin efflux carrier component, putative, expressed -
14 Sobic.003G253700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
15 Sobic.001G109400 glycosyl hydrolases family 17, putative, expressed -
16 Sobic.001G038700 membrane associated DUF588 domain containing protein, putative, expressed -
17 Sobic.005G048800 expressed protein -
18 Sobic.006G255200 - -
19 Sobic.002G110600 regulatory protein, putative, expressed -
20 Sobic.002G001500 pentatricopeptide containing protein, putative, expressed -


Gene co-expression network
sample Sobic010G000200 Sobic010G000200 Sobic004G173200 Sobic004G173200 Sobic010G000200--Sobic004G173200 Sobic010G012200 Sobic010G012200 Sobic010G000200--Sobic010G012200 Sobic003G362800 Sobic003G362800 Sobic010G000200--Sobic003G362800 Sobic001G212900 Sobic001G212900 Sobic010G000200--Sobic001G212900 Sobic003G155000 Sobic003G155000 Sobic010G000200--Sobic003G155000 Sobic003G262600 Sobic003G262600 Sobic010G000200--Sobic003G262600 Sobic001G370800 Sobic001G370800 Sobic010G000200--Sobic001G370800 Sobic002G187900 Sobic002G187900 Sobic010G000200--Sobic002G187900 Sobic003G225200 Sobic003G225200 Sobic010G000200--Sobic003G225200 Sobic004G173200--Sobic010G000200 Sobic004G173200--Sobic003G262600 Sobic002G398600 Sobic002G398600 Sobic004G173200--Sobic002G398600 Sobic004G173200--Sobic001G370800 Sobic004G173200--Sobic002G187900 Sobic004G173200--Sobic003G362800 Sobic006G249600 Sobic006G249600 Sobic004G173200--Sobic006G249600 Sobic004G173200--Sobic001G212900 Sobic002G001500 Sobic002G001500 Sobic004G173200--Sobic002G001500 Sobic001G520000 Sobic001G520000 Sobic010G012200--Sobic001G520000 Sobic010G012200--Sobic003G155000 Sobic003G253700 Sobic003G253700 Sobic010G012200--Sobic003G253700 Sobic001G038700 Sobic001G038700 Sobic010G012200--Sobic001G038700 Sobic008G170800 Sobic008G170800 Sobic010G012200--Sobic008G170800 Sobic006G157450 Sobic006G157450 Sobic010G012200--Sobic006G157450 Sobic010G012200--Sobic010G000200 Sobic004G315400 Sobic004G315400 Sobic010G012200--Sobic004G315400 Sobic008G103400 Sobic008G103400 Sobic010G012200--Sobic008G103400 Sobic003G362800--Sobic002G001500 Sobic001G113400 Sobic001G113400 Sobic003G362800--Sobic001G113400 Sobic003G155800 Sobic003G155800 Sobic003G362800--Sobic003G155800 Sobic004G181000 Sobic004G181000 Sobic003G362800--Sobic004G181000 Sobic004G144300 Sobic004G144300 Sobic003G362800--Sobic004G144300 Sobic003G362800--Sobic008G103400 Sobic003G362800--Sobic010G000200 Sobic003G362800--Sobic004G173200 Sobic003G001650 Sobic003G001650 Sobic003G362800--Sobic003G001650 Sobic001G109400 Sobic001G109400 Sobic001G212900--Sobic001G109400 Sobic001G212900--Sobic006G249600 Sobic001G212900--Sobic002G187900 Sobic002G374000 Sobic002G374000 Sobic001G212900--Sobic002G374000 Sobic001G212900--Sobic010G000200 Sobic002G110600 Sobic002G110600 Sobic001G212900--Sobic002G110600 Sobic004G127600 Sobic004G127600 Sobic001G212900--Sobic004G127600 Sobic001G212900--Sobic004G173200 Sobic001G212900--Sobic010G012200 Sobic003G155000--Sobic003G253700 Sobic003G155000--Sobic001G520000 Sobic003G155000--Sobic010G012200 Sobic003G365200 Sobic003G365200 Sobic003G155000--Sobic003G365200 Sobic003G155000--Sobic003G262600 Sobic005G048800 Sobic005G048800 Sobic003G155000--Sobic005G048800 Sobic003G155000--Sobic006G249600 Sobic003G155000--Sobic008G170800 Sobic003G155000--Sobic006G157450 Sobic003G262600--Sobic003G155000 Sobic003G262600--Sobic004G173200 Sobic003G262600--Sobic003G253700 Sobic003G262600--Sobic006G249600 Sobic003G262600--Sobic010G000200 Sobic003G262600--Sobic002G187900 Sobic003G262600--Sobic003G365200 Sobic009G223900 Sobic009G223900 Sobic003G262600--Sobic009G223900 Sobic003G262600--Sobic003G362800 Sobic009G026600 Sobic009G026600 Sobic001G370800--Sobic009G026600 Sobic001G370800--Sobic004G173200 Sobic001G370800--Sobic001G038700 Sobic001G442000 Sobic001G442000 Sobic001G370800--Sobic001G442000 Sobic002G309300 Sobic002G309300 Sobic001G370800--Sobic002G309300 Sobic009G088300 Sobic009G088300 Sobic001G370800--Sobic009G088300 Sobic004G218400 Sobic004G218400 Sobic001G370800--Sobic004G218400 Sobic006G255200 Sobic006G255200 Sobic001G370800--Sobic006G255200 Sobic003G263900 Sobic003G263900 Sobic001G370800--Sobic003G263900 Sobic002G187900--Sobic003G263900 Sobic002G187900--Sobic006G255200 Sobic002G187900--Sobic004G127600 Sobic002G187900--Sobic006G249600 Sobic002G187900--Sobic001G109400 Sobic002G187900--Sobic001G212900 Sobic004G227700 Sobic004G227700 Sobic002G187900--Sobic004G227700 Sobic002G187900--Sobic004G173200 Sobic002G187900--Sobic002G398600 Sobic003G225200--Sobic010G000200 Sobic003G225200--Sobic001G212900 Sobic001G503700 Sobic001G503700 Sobic003G225200--Sobic001G503700 Sobic001G492400 Sobic001G492400 Sobic003G225200--Sobic001G492400 Sobic003G225200--Sobic004G173200 Sobic003G225200--Sobic002G110600 Sobic003G225200--Sobic008G103400 Sobic003G225200--Sobic002G187900 Sobic007G077466 Sobic007G077466 Sobic003G225200--Sobic007G077466
Octagon: transcription factors


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