Gene annotation
Transcriptome id Sobic.005G048800.1
Synonym Sb05g003980
Functional annotation expressed protein
UniProt C5Y584
Pfam -
Panther DB PTHR13734 PTHR13734:SF46
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G09580 : -
RAP-DB (Rice) LOC_Os11g06670.1 : expressed protein
MaizeGDB (Corn) Zm00025a034179
Brachypodium -
Barley -
Wheat TraesCS4D02G109700 , TraesCS4B02G112200 , TraesCS4A02G208600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G155000 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
2 Sobic.010G012200 - K00851: E2.7.1.12, gntK, gluconokinase
3 Sobic.008G170800 OsWAK126 - OsWAK receptor-like protein kinase, expressed -
4 Sobic.001G520000 auxin efflux carrier component, putative, expressed -
5 Sobic.003G253700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
6 Sobic.004G144300 - -
7 Sobic.010G000200 expressed protein -
8 Sobic.003G362800 - -
9 Sobic.006G157450 - -
10 Sobic.008G103400 universal stress protein domain containing protein, putative, expressed -
11 Sobic.007G046600 - -
12 Sobic.006G249600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
13 Sobic.003G365200 expressed protein -
14 Sobic.009G208000 high level expression during drought stress(PubMedID : 27006630)@RHsf 10/Hsf sp 17(PubMedID : 27006630)@expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
15 Sobic.001G096200 mitochondrial ribosomal protein S10, putative, expressed K02946: RP-S10, MRPS10, small subunit ribosomal protein S10
16 Sobic.003G155800 dnaJ homolog subfamily B member 11 precursor, putative, expressed K09517: DnaJ homolog subfamily B member 11
17 Sobic.008G192900 -(PubMedID : 29751546)@sodium/hydrogen exchanger 7, putative, expressed -
18 Sobic.001G038700 membrane associated DUF588 domain containing protein, putative, expressed -
19 Sobic.002G206900 GEX2, putative, expressed -
20 Sobic.003G063400 glycosyltransferase family 43 protein, putative, expressed -


Gene co-expression network
sample Sobic005G048800 Sobic005G048800 Sobic003G155000 Sobic003G155000 Sobic005G048800--Sobic003G155000 Sobic010G012200 Sobic010G012200 Sobic005G048800--Sobic010G012200 Sobic008G170800 Sobic008G170800 Sobic005G048800--Sobic008G170800 Sobic001G520000 Sobic001G520000 Sobic005G048800--Sobic001G520000 Sobic003G253700 Sobic003G253700 Sobic005G048800--Sobic003G253700 Sobic004G144300 Sobic004G144300 Sobic005G048800--Sobic004G144300 Sobic010G000200 Sobic010G000200 Sobic005G048800--Sobic010G000200 Sobic003G362800 Sobic003G362800 Sobic005G048800--Sobic003G362800 Sobic006G157450 Sobic006G157450 Sobic005G048800--Sobic006G157450 Sobic003G155000--Sobic003G253700 Sobic003G155000--Sobic001G520000 Sobic003G155000--Sobic010G012200 Sobic003G365200 Sobic003G365200 Sobic003G155000--Sobic003G365200 Sobic003G262600 Sobic003G262600 Sobic003G155000--Sobic003G262600 Sobic003G155000--Sobic005G048800 Sobic006G249600 Sobic006G249600 Sobic003G155000--Sobic006G249600 Sobic003G155000--Sobic008G170800 Sobic003G155000--Sobic006G157450 Sobic010G012200--Sobic001G520000 Sobic010G012200--Sobic003G155000 Sobic010G012200--Sobic003G253700 Sobic001G038700 Sobic001G038700 Sobic010G012200--Sobic001G038700 Sobic010G012200--Sobic008G170800 Sobic010G012200--Sobic006G157450 Sobic010G012200--Sobic010G000200 Sobic004G315400 Sobic004G315400 Sobic010G012200--Sobic004G315400 Sobic008G103400 Sobic008G103400 Sobic010G012200--Sobic008G103400 Sobic001G090700 Sobic001G090700 Sobic008G170800--Sobic001G090700 Sobic008G170800--Sobic006G157450 Sobic008G170800--Sobic001G038700 Sobic008G170800--Sobic010G012200 Sobic008G190600 Sobic008G190600 Sobic008G170800--Sobic008G190600 Sobic008G170800--Sobic003G155000 Sobic001G454600 Sobic001G454600 Sobic008G170800--Sobic001G454600 Sobic008G142200 Sobic008G142200 Sobic008G170800--Sobic008G142200 Sobic008G170800--Sobic003G253700 Sobic001G520000--Sobic003G253700 Sobic006G213350 Sobic006G213350 Sobic001G520000--Sobic006G213350 Sobic001G483001 Sobic001G483001 Sobic001G520000--Sobic001G483001 Sobic001G520000--Sobic010G012200 Sobic001G520000--Sobic003G155000 Sobic008G160100 Sobic008G160100 Sobic001G520000--Sobic008G160100 Sobic001G520000--Sobic006G157450 Sobic001G096200 Sobic001G096200 Sobic001G520000--Sobic001G096200 Sobic001G520000--Sobic008G170800 Sobic003G253700--Sobic003G155000 Sobic003G253700--Sobic001G520000 Sobic003G253700--Sobic003G365200 Sobic003G253700--Sobic010G012200 Sobic003G253700--Sobic006G249600 Sobic003G253700--Sobic006G157450 Sobic003G155800 Sobic003G155800 Sobic003G253700--Sobic003G155800 Sobic003G253700--Sobic008G170800 Sobic003G253700--Sobic003G262600 Sobic004G310400 Sobic004G310400 Sobic004G144300--Sobic004G310400 Sobic004G144300--Sobic003G362800 Sobic001G113400 Sobic001G113400 Sobic004G144300--Sobic001G113400 Sobic004G144300--Sobic005G048800 Sobic004G144300--Sobic001G520000 Sobic002G085600 Sobic002G085600 Sobic004G144300--Sobic002G085600 Sobic003G118500 Sobic003G118500 Sobic004G144300--Sobic003G118500 Sobic009G049100 Sobic009G049100 Sobic004G144300--Sobic009G049100 Sobic004G144300--Sobic001G096200 Sobic004G173200 Sobic004G173200 Sobic010G000200--Sobic004G173200 Sobic010G000200--Sobic010G012200 Sobic010G000200--Sobic003G362800 Sobic001G212900 Sobic001G212900 Sobic010G000200--Sobic001G212900 Sobic010G000200--Sobic003G155000 Sobic010G000200--Sobic003G262600 Sobic001G370800 Sobic001G370800 Sobic010G000200--Sobic001G370800 Sobic002G187900 Sobic002G187900 Sobic010G000200--Sobic002G187900 Sobic003G225200 Sobic003G225200 Sobic010G000200--Sobic003G225200 Sobic002G001500 Sobic002G001500 Sobic003G362800--Sobic002G001500 Sobic003G362800--Sobic001G113400 Sobic003G362800--Sobic003G155800 Sobic004G181000 Sobic004G181000 Sobic003G362800--Sobic004G181000 Sobic003G362800--Sobic004G144300 Sobic003G362800--Sobic008G103400 Sobic003G362800--Sobic010G000200 Sobic003G362800--Sobic004G173200 Sobic003G001650 Sobic003G001650 Sobic003G362800--Sobic003G001650 Sobic006G157450--Sobic001G038700 Sobic006G157450--Sobic008G170800 Sobic001G191500 Sobic001G191500 Sobic006G157450--Sobic001G191500 Sobic006G157450--Sobic001G520000 Sobic006G157450--Sobic010G012200 Sobic006G157450--Sobic003G253700 Sobic006G157450--Sobic003G155000 Sobic006G157450--Sobic001G483001 Sobic006G157450--Sobic008G190600
Octagon: transcription factors


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