Gene annotation
Transcriptome id Sobic.003G365200.1
Synonym Sb03g040690
Functional annotation expressed protein
UniProt C5XQK1
Pfam -
Panther DB PTHR36352
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G36145 : -
RAP-DB (Rice) LOC_Os01g64270.1 : expressed protein
MaizeGDB (Corn) Zm00025a039579
Brachypodium -
Barley -
Wheat TraesCS3D02G367600 , TraesCS3B02G407300 , TraesCS3A02G375100
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G253700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
2 Sobic.003G155000 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
3 Sobic.001G520000 auxin efflux carrier component, putative, expressed -
4 Sobic.006G134300 - -
5 Sobic.010G012200 - K00851: E2.7.1.12, gntK, gluconokinase
6 Sobic.003G262600 OsWAK10d - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed -
7 Sobic.003G155800 dnaJ homolog subfamily B member 11 precursor, putative, expressed K09517: DnaJ homolog subfamily B member 11
8 Sobic.004G227700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein kinase, putative, expressed -
9 Sobic.006G249600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
10 Sobic.008G192900 -(PubMedID : 29751546)@sodium/hydrogen exchanger 7, putative, expressed -
11 Sobic.010G000200 expressed protein -
12 Sobic.005G048800 expressed protein -
13 Sobic.002G206900 GEX2, putative, expressed -
14 Sobic.001G212900 FHA domain containing protein, putative, expressed K10867: NBN, nibrin
15 Sobic.001G213300 cytochrome P450, putative, expressed K15402: fatty acid omega-hydroxylase
16 Sobic.001G096200 mitochondrial ribosomal protein S10, putative, expressed K02946: RP-S10, MRPS10, small subunit ribosomal protein S10
17 Sobic.009G223900 protein binding protein, putative, expressed -
18 Sobic.003G362800 - -
19 Sobic.006G157450 - -
20 Sobic.002G187900 expressed protein -


Gene co-expression network
sample Sobic003G365200 Sobic003G365200 Sobic003G253700 Sobic003G253700 Sobic003G365200--Sobic003G253700 Sobic003G155000 Sobic003G155000 Sobic003G365200--Sobic003G155000 Sobic001G520000 Sobic001G520000 Sobic003G365200--Sobic001G520000 Sobic006G134300 Sobic006G134300 Sobic003G365200--Sobic006G134300 Sobic010G012200 Sobic010G012200 Sobic003G365200--Sobic010G012200 Sobic003G262600 Sobic003G262600 Sobic003G365200--Sobic003G262600 Sobic003G155800 Sobic003G155800 Sobic003G365200--Sobic003G155800 Sobic004G227700 Sobic004G227700 Sobic003G365200--Sobic004G227700 Sobic006G249600 Sobic006G249600 Sobic003G365200--Sobic006G249600 Sobic003G253700--Sobic003G155000 Sobic003G253700--Sobic001G520000 Sobic003G253700--Sobic003G365200 Sobic003G253700--Sobic010G012200 Sobic003G253700--Sobic006G249600 Sobic006G157450 Sobic006G157450 Sobic003G253700--Sobic006G157450 Sobic003G253700--Sobic003G155800 Sobic008G170800 Sobic008G170800 Sobic003G253700--Sobic008G170800 Sobic003G253700--Sobic003G262600 Sobic003G155000--Sobic003G253700 Sobic003G155000--Sobic001G520000 Sobic003G155000--Sobic010G012200 Sobic003G155000--Sobic003G365200 Sobic003G155000--Sobic003G262600 Sobic005G048800 Sobic005G048800 Sobic003G155000--Sobic005G048800 Sobic003G155000--Sobic006G249600 Sobic003G155000--Sobic008G170800 Sobic003G155000--Sobic006G157450 Sobic001G520000--Sobic003G253700 Sobic006G213350 Sobic006G213350 Sobic001G520000--Sobic006G213350 Sobic001G483001 Sobic001G483001 Sobic001G520000--Sobic001G483001 Sobic001G520000--Sobic010G012200 Sobic001G520000--Sobic003G155000 Sobic008G160100 Sobic008G160100 Sobic001G520000--Sobic008G160100 Sobic001G520000--Sobic006G157450 Sobic001G096200 Sobic001G096200 Sobic001G520000--Sobic001G096200 Sobic001G520000--Sobic008G170800 Sobic002G187900 Sobic002G187900 Sobic006G134300--Sobic002G187900 Sobic006G134300--Sobic006G249600 Sobic006G134300--Sobic004G227700 Sobic006G134300--Sobic003G155000 Sobic006G134300--Sobic003G253700 Sobic003G263900 Sobic003G263900 Sobic006G134300--Sobic003G263900 Sobic006G134300--Sobic003G365200 Sobic004G127600 Sobic004G127600 Sobic006G134300--Sobic004G127600 Sobic001G212900 Sobic001G212900 Sobic006G134300--Sobic001G212900 Sobic010G012200--Sobic001G520000 Sobic010G012200--Sobic003G155000 Sobic010G012200--Sobic003G253700 Sobic001G038700 Sobic001G038700 Sobic010G012200--Sobic001G038700 Sobic010G012200--Sobic008G170800 Sobic010G012200--Sobic006G157450 Sobic010G000200 Sobic010G000200 Sobic010G012200--Sobic010G000200 Sobic004G315400 Sobic004G315400 Sobic010G012200--Sobic004G315400 Sobic008G103400 Sobic008G103400 Sobic010G012200--Sobic008G103400 Sobic003G262600--Sobic003G155000 Sobic004G173200 Sobic004G173200 Sobic003G262600--Sobic004G173200 Sobic003G262600--Sobic003G253700 Sobic003G262600--Sobic006G249600 Sobic003G262600--Sobic010G000200 Sobic003G262600--Sobic002G187900 Sobic003G262600--Sobic003G365200 Sobic009G223900 Sobic009G223900 Sobic003G262600--Sobic009G223900 Sobic003G362800 Sobic003G362800 Sobic003G262600--Sobic003G362800 Sobic003G155800--Sobic003G362800 Sobic004G181000 Sobic004G181000 Sobic003G155800--Sobic004G181000 Sobic003G155800--Sobic003G253700 Sobic005G063600 Sobic005G063600 Sobic003G155800--Sobic005G063600 Sobic003G155800--Sobic009G223900 Sobic009G252600 Sobic009G252600 Sobic003G155800--Sobic009G252600 Sobic002G001500 Sobic002G001500 Sobic003G155800--Sobic002G001500 Sobic003G155800--Sobic001G520000 Sobic002G206900 Sobic002G206900 Sobic003G155800--Sobic002G206900 Sobic008G142200 Sobic008G142200 Sobic004G227700--Sobic008G142200 Sobic004G227700--Sobic002G187900 Sobic009G094200 Sobic009G094200 Sobic004G227700--Sobic009G094200 Sobic004G082600 Sobic004G082600 Sobic004G227700--Sobic004G082600 Sobic004G227700--Sobic003G263900 Sobic004G227700--Sobic003G155000 Sobic003G063400 Sobic003G063400 Sobic004G227700--Sobic003G063400 Sobic004G227700--Sobic006G134300 Sobic004G250400 Sobic004G250400 Sobic004G227700--Sobic004G250400 Sobic006G249600--Sobic001G212900 Sobic002G398600 Sobic002G398600 Sobic006G249600--Sobic002G398600 Sobic006G249600--Sobic002G187900 Sobic006G249600--Sobic003G253700 Sobic006G249600--Sobic003G155000 Sobic006G249600--Sobic003G263900 Sobic001G109400 Sobic001G109400 Sobic006G249600--Sobic001G109400 Sobic006G249600--Sobic004G173200 Sobic006G249600--Sobic006G157450
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.