Gene annotation
Transcriptome id Sobic.001G213300.1
Synonym CYP86B1, Sb01g018855
Functional annotation cytochrome P450, putative, expressed
UniProt A0A1B6QK61
Pfam PF00067
Panther DB PTHR24296 PTHR24296:SF3
NCBI CDD KOG0157; Cytochrome P450 CYP4/CYP19/CYP26 subfamilies
KEGG Orthology K15402; fatty acid omega-hydroxylase
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT5G23190 : cytochrome P450, family 86, subfamily B, polypeptide 1
RAP-DB (Rice) LOC_Os10g34480.1 : cytochrome P450, putative, expressed
MaizeGDB (Corn) Zm00025a017554 , Zm00025a006545
Brachypodium KQJ97188 , KQK00714
Barley HORVU1Hr1G042810.2 , HORVU1Hr1G042810.3 , HORVU1Hr1G042810.1
Wheat TraesCS1B02G177900 , TraesCS7D02G520200 , TraesCS1A02G161400 , TraesCS1D02G158400
Populus -


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cDNA sequences
Sobic.001G213300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G253700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
2 Sobic.001G096200 mitochondrial ribosomal protein S10, putative, expressed K02946: RP-S10, MRPS10, small subunit ribosomal protein S10
3 Sobic.006G213350 - -
4 Sobic.001G520000 auxin efflux carrier component, putative, expressed -
5 Sobic.003G365200 expressed protein -
6 Sobic.001G212900 FHA domain containing protein, putative, expressed K10867: NBN, nibrin
7 Sobic.004G315400 cation efflux family protein, putative, expressed -
8 Sobic.006G134300 - -
9 Sobic.003G155000 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
10 Sobic.003G063400 glycosyltransferase family 43 protein, putative, expressed -
11 Sobic.010G012200 - K00851: E2.7.1.12, gntK, gluconokinase
12 Sobic.001G109400 glycosyl hydrolases family 17, putative, expressed -
13 Sobic.005G031400 embryogenesis transmembrane protein, putative, expressed -
14 Sobic.006G249600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
15 Sobic.006G243000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCB4, putative, expressed -
16 Sobic.003G225200 CAMK_CAMK_like.9 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
17 Sobic.005G048800 expressed protein -
18 Sobic.002G187900 expressed protein -
19 Sobic.004G227700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein kinase, putative, expressed -
20 Sobic.008G143901 - -


Gene co-expression network
sample Sobic001G213300 Sobic001G213300 Sobic003G253700 Sobic003G253700 Sobic001G213300--Sobic003G253700 Sobic001G096200 Sobic001G096200 Sobic001G213300--Sobic001G096200 Sobic006G213350 Sobic006G213350 Sobic001G213300--Sobic006G213350 Sobic001G520000 Sobic001G520000 Sobic001G213300--Sobic001G520000 Sobic003G365200 Sobic003G365200 Sobic001G213300--Sobic003G365200 Sobic001G212900 Sobic001G212900 Sobic001G213300--Sobic001G212900 Sobic004G315400 Sobic004G315400 Sobic001G213300--Sobic004G315400 Sobic006G134300 Sobic006G134300 Sobic001G213300--Sobic006G134300 Sobic003G155000 Sobic003G155000 Sobic001G213300--Sobic003G155000 Sobic003G253700--Sobic003G155000 Sobic003G253700--Sobic001G520000 Sobic003G253700--Sobic003G365200 Sobic010G012200 Sobic010G012200 Sobic003G253700--Sobic010G012200 Sobic006G249600 Sobic006G249600 Sobic003G253700--Sobic006G249600 Sobic006G157450 Sobic006G157450 Sobic003G253700--Sobic006G157450 Sobic003G155800 Sobic003G155800 Sobic003G253700--Sobic003G155800 Sobic008G170800 Sobic008G170800 Sobic003G253700--Sobic008G170800 Sobic003G262600 Sobic003G262600 Sobic003G253700--Sobic003G262600 Sobic004G310400 Sobic004G310400 Sobic001G096200--Sobic004G310400 Sobic004G026000 Sobic004G026000 Sobic001G096200--Sobic004G026000 Sobic001G096200--Sobic001G520000 Sobic004G314100 Sobic004G314100 Sobic001G096200--Sobic004G314100 Sobic001G096200--Sobic003G155800 Sobic006G243000 Sobic006G243000 Sobic001G096200--Sobic006G243000 Sobic003G118500 Sobic003G118500 Sobic001G096200--Sobic003G118500 Sobic001G096200--Sobic003G253700 Sobic004G231501 Sobic004G231501 Sobic001G096200--Sobic004G231501 Sobic006G213350--Sobic001G520000 Sobic005G031400 Sobic005G031400 Sobic006G213350--Sobic005G031400 Sobic001G483001 Sobic001G483001 Sobic006G213350--Sobic001G483001 Sobic008G160100 Sobic008G160100 Sobic006G213350--Sobic008G160100 Sobic006G213350--Sobic010G012200 Sobic008G143901 Sobic008G143901 Sobic006G213350--Sobic008G143901 Sobic006G213350--Sobic003G253700 Sobic006G213350--Sobic006G243000 Sobic006G213350--Sobic006G157450 Sobic001G520000--Sobic003G253700 Sobic001G520000--Sobic006G213350 Sobic001G520000--Sobic001G483001 Sobic001G520000--Sobic010G012200 Sobic001G520000--Sobic003G155000 Sobic001G520000--Sobic008G160100 Sobic001G520000--Sobic006G157450 Sobic001G520000--Sobic001G096200 Sobic001G520000--Sobic008G170800 Sobic003G365200--Sobic003G253700 Sobic003G365200--Sobic003G155000 Sobic003G365200--Sobic001G520000 Sobic003G365200--Sobic006G134300 Sobic003G365200--Sobic010G012200 Sobic003G365200--Sobic003G262600 Sobic003G365200--Sobic003G155800 Sobic004G227700 Sobic004G227700 Sobic003G365200--Sobic004G227700 Sobic003G365200--Sobic006G249600 Sobic001G109400 Sobic001G109400 Sobic001G212900--Sobic001G109400 Sobic001G212900--Sobic006G249600 Sobic002G187900 Sobic002G187900 Sobic001G212900--Sobic002G187900 Sobic002G374000 Sobic002G374000 Sobic001G212900--Sobic002G374000 Sobic010G000200 Sobic010G000200 Sobic001G212900--Sobic010G000200 Sobic002G110600 Sobic002G110600 Sobic001G212900--Sobic002G110600 Sobic004G127600 Sobic004G127600 Sobic001G212900--Sobic004G127600 Sobic004G173200 Sobic004G173200 Sobic001G212900--Sobic004G173200 Sobic001G212900--Sobic010G012200 Sobic004G315400--Sobic002G374000 Sobic004G315400--Sobic010G012200 Sobic004G315400--Sobic001G109400 Sobic004G315400--Sobic001G212900 Sobic008G103400 Sobic008G103400 Sobic004G315400--Sobic008G103400 Sobic004G315400--Sobic001G483001 Sobic004G072201 Sobic004G072201 Sobic004G315400--Sobic004G072201 Sobic004G315400--Sobic005G031400 Sobic004G315400--Sobic002G110600 Sobic006G134300--Sobic002G187900 Sobic006G134300--Sobic006G249600 Sobic006G134300--Sobic004G227700 Sobic006G134300--Sobic003G155000 Sobic006G134300--Sobic003G253700 Sobic003G263900 Sobic003G263900 Sobic006G134300--Sobic003G263900 Sobic006G134300--Sobic003G365200 Sobic006G134300--Sobic004G127600 Sobic006G134300--Sobic001G212900 Sobic003G155000--Sobic003G253700 Sobic003G155000--Sobic001G520000 Sobic003G155000--Sobic010G012200 Sobic003G155000--Sobic003G365200 Sobic003G155000--Sobic003G262600 Sobic005G048800 Sobic005G048800 Sobic003G155000--Sobic005G048800 Sobic003G155000--Sobic006G249600 Sobic003G155000--Sobic008G170800 Sobic003G155000--Sobic006G157450
Octagon: transcription factors


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