Gene annotation
Transcriptome id Sobic.008G159800.1
Synonym
Functional annotation -
UniProt A0A1B6PE30
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G242000 phytosulfokine receptor precursor, putative, expressed -
2 Sobic.005G025400 CAMK_CAMK_like.42 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
3 Sobic.003G440500 YGGT family protein, putative, expressed K02221: YggT family protein
4 Sobic.005G090700 - -
5 Sobic.007G185000 leucine rich repeat protein, putative, expressed -
6 Sobic.005G014400 esterase, putative, expressed -
7 Sobic.003G308900 expressed protein -
8 Sobic.002G377400 cysteine-rich receptor-like protein kinase 16 precursor, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
9 Sobic.003G336600 homeobox domain containing protein, expressed -
10 Sobic.007G165100 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
11 Sobic.009G112500 lipase, putative, expressed -
12 Sobic.006G024400 receptor-like protein kinase, putative, expressed -
13 Sobic.008G134500 protein kinase domain containing protein, expressed -
14 Sobic.007G114650 - -
15 Sobic.010G249600 macrophage migration inhibitory factor, putative, expressed -
16 Sobic.010G118401 - -
17 Sobic.010G213100 RNA-dependent RNA polymerase, putative, expressed K11699: RDR, RNA-dependent RNA polymerase
18 Sobic.002G037700 expressed protein K10891: fanconi anemia group D2 protein
19 Sobic.008G016800 zinc finger DHHC domain-containing protein, putative, expressed -
20 Sobic.006G170800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lactate/malate dehydrogenase, putative, expressed K00025: malate dehydrogenase


Gene co-expression network
sample Sobic008G159800 Sobic008G159800 Sobic010G242000 Sobic010G242000 Sobic008G159800--Sobic010G242000 Sobic005G025400 Sobic005G025400 Sobic008G159800--Sobic005G025400 Sobic003G440500 Sobic003G440500 Sobic008G159800--Sobic003G440500 Sobic005G090700 Sobic005G090700 Sobic008G159800--Sobic005G090700 Sobic007G185000 Sobic007G185000 Sobic008G159800--Sobic007G185000 Sobic005G014400 Sobic005G014400 Sobic008G159800--Sobic005G014400 Sobic003G308900 Sobic003G308900 Sobic008G159800--Sobic003G308900 Sobic002G377400 Sobic002G377400 Sobic008G159800--Sobic002G377400 Sobic003G336600 Sobic003G336600 Sobic008G159800--Sobic003G336600 Sobic010G242000--Sobic005G025400 Sobic006G170800 Sobic006G170800 Sobic010G242000--Sobic006G170800 Sobic010G242000--Sobic008G159800 Sobic007G114650 Sobic007G114650 Sobic010G242000--Sobic007G114650 Sobic002G399000 Sobic002G399000 Sobic010G242000--Sobic002G399000 Sobic010G242000--Sobic003G440500 Sobic001G350300 Sobic001G350300 Sobic010G242000--Sobic001G350300 Sobic008G134500 Sobic008G134500 Sobic010G242000--Sobic008G134500 Sobic002G320700 Sobic002G320700 Sobic010G242000--Sobic002G320700 Sobic005G025400--Sobic010G242000 Sobic005G025400--Sobic003G440500 Sobic005G025400--Sobic002G399000 Sobic005G025400--Sobic006G170800 Sobic005G025400--Sobic001G350300 Sobic009G223900 Sobic009G223900 Sobic005G025400--Sobic009G223900 Sobic002G085600 Sobic002G085600 Sobic005G025400--Sobic002G085600 Sobic004G202750 Sobic004G202750 Sobic005G025400--Sobic004G202750 Sobic001G350800 Sobic001G350800 Sobic005G025400--Sobic001G350800 Sobic010G249600 Sobic010G249600 Sobic003G440500--Sobic010G249600 Sobic003G440500--Sobic002G377400 Sobic003G440500--Sobic009G223900 Sobic003G440500--Sobic005G025400 Sobic003G440500--Sobic007G185000 Sobic003G440500--Sobic010G242000 Sobic003G440500--Sobic003G308900 Sobic003G440500--Sobic002G399000 Sobic009G181900 Sobic009G181900 Sobic003G440500--Sobic009G181900 Sobic005G090700--Sobic003G308900 Sobic005G090700--Sobic008G159800 Sobic005G090700--Sobic010G249600 Sobic005G090700--Sobic002G377400 Sobic005G090700--Sobic003G336600 Sobic009G112500 Sobic009G112500 Sobic005G090700--Sobic009G112500 Sobic002G296800 Sobic002G296800 Sobic005G090700--Sobic002G296800 Sobic005G090700--Sobic005G014400 Sobic006G268100 Sobic006G268100 Sobic005G090700--Sobic006G268100 Sobic007G185000--Sobic002G377400 Sobic007G185000--Sobic003G308900 Sobic003G243750 Sobic003G243750 Sobic007G185000--Sobic003G243750 Sobic007G185000--Sobic003G440500 Sobic009G203600 Sobic009G203600 Sobic007G185000--Sobic009G203600 Sobic007G165100 Sobic007G165100 Sobic007G185000--Sobic007G165100 Sobic007G226000 Sobic007G226000 Sobic007G185000--Sobic007G226000 Sobic009G047033 Sobic009G047033 Sobic007G185000--Sobic009G047033 Sobic007G185000--Sobic010G249600 Sobic003G251900 Sobic003G251900 Sobic005G014400--Sobic003G251900 Sobic001G093732 Sobic001G093732 Sobic005G014400--Sobic001G093732 Sobic004G181000 Sobic004G181000 Sobic005G014400--Sobic004G181000 Sobic005G014400--Sobic001G350800 Sobic006G165501 Sobic006G165501 Sobic005G014400--Sobic006G165501 Sobic005G014400--Sobic009G112500 Sobic005G014400--Sobic005G025400 Sobic008G016800 Sobic008G016800 Sobic005G014400--Sobic008G016800 Sobic001G113400 Sobic001G113400 Sobic005G014400--Sobic001G113400 Sobic003G308900--Sobic002G377400 Sobic003G308900--Sobic007G185000 Sobic003G308900--Sobic010G249600 Sobic003G308900--Sobic003G440500 Sobic003G308900--Sobic002G296800 Sobic003G308900--Sobic005G090700 Sobic003G308900--Sobic003G243750 Sobic008G065700 Sobic008G065700 Sobic003G308900--Sobic008G065700 Sobic003G308900--Sobic008G159800 Sobic002G377400--Sobic003G308900 Sobic002G377400--Sobic007G185000 Sobic002G377400--Sobic003G440500 Sobic002G377400--Sobic003G243750 Sobic002G377400--Sobic010G249600 Sobic002G377400--Sobic002G296800 Sobic002G398600 Sobic002G398600 Sobic002G377400--Sobic002G398600 Sobic003G262500 Sobic003G262500 Sobic002G377400--Sobic003G262500 Sobic002G377400--Sobic008G065700 Sobic003G091900 Sobic003G091900 Sobic003G336600--Sobic003G091900 Sobic010G213100 Sobic010G213100 Sobic003G336600--Sobic010G213100 Sobic003G336600--Sobic008G159800 Sobic003G336600--Sobic003G308900 Sobic003G336600--Sobic005G090700 Sobic003G336600--Sobic007G185000 Sobic003G336600--Sobic003G243750 Sobic003G336600--Sobic002G377400 Sobic003G336600--Sobic007G165100
Octagon: transcription factors


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