Gene annotation
Transcriptome id Sobic.008G134500.1
Synonym Sb08g018610
Functional annotation protein kinase domain containing protein, expressed
UniProt A0A1Z5R6L9
Pfam PF13855 PF07714 PF12819
Panther DB PTHR27003 PTHR27003:SF116
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G29990 : Leucine-rich repeat transmembrane protein kinase protein
RAP-DB (Rice) LOC_Os12g37980.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a025429
Brachypodium KQJ86233 , KQJ86234 , PNT62478 , KQJ86227 , KQJ86229 , KQJ86230 , PNT62482 , KQJ86226
Barley HORVU5Hr1G021690.2 , HORVU5Hr1G021690.4 , HORVU5Hr1G021690.9 , HORVU5Hr1G021690.13 , HORVU5Hr1G021690.11 , HORVU5Hr1G021690.10 , HORVU5Hr1G021690.17 , HORVU5Hr1G021690.16 , HORVU5Hr1G021690.15 , HORVU5Hr1G021690.14 , HORVU5Hr1G021690.19 , HORVU5Hr1G021690.18 , HORVU5Hr1G021690.3 , HORVU5Hr1G021690.7 , HORVU5Hr1G021690.6 , HORVU5Hr1G021690.5 , HORVU5Hr1G021690.8 , HORVU5Hr1G021690.22 , HORVU5Hr1G021690.20 , HORVU5Hr1G021690.21 , HORVU5Hr1G021690.48 , HORVU5Hr1G021690.46 , HORVU5Hr1G021690.41 , HORVU1Hr1G078300.3 , HORVU1Hr1G078300.2 , HORVU1Hr1G078300.1 , HORVU1Hr1G078300.6 , HORVU1Hr1G078300.5 , HORVU1Hr1G078300.4
Wheat TraesCS1D02G348000 , TraesCS5D02G095300 , TraesCS5A02G082900 , TraesCS5B02G089000 , TraesCS5B02G089000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G114650 - -
2 Sobic.010G242000 phytosulfokine receptor precursor, putative, expressed -
3 Sobic.007G185000 leucine rich repeat protein, putative, expressed -
4 Sobic.008G159800 - -
5 Sobic.005G025400 CAMK_CAMK_like.42 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
6 Sobic.009G187900 ethylene-responsive protein related, putative, expressed -
7 Sobic.003G440500 YGGT family protein, putative, expressed K02221: YggT family protein
8 Sobic.006G170800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lactate/malate dehydrogenase, putative, expressed K00025: malate dehydrogenase
9 Sobic.007G165100 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
10 Sobic.003G308900 expressed protein -
11 Sobic.003G130650 - -
12 Sobic.010G278400 coiled-coil domain-containing protein 12, putative, expressed K12871: coiled-coil domain-containing protein 12
13 Sobic.003G250340 - K07976: Rab family, other
14 Sobic.009G181900 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
15 Sobic.009G203600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Receptor-like protein kinase HSL1(PubMedID : 31721651)@receptor-like protein kinase 5 precursor, putative, expressed -
16 Sobic.005G038700 transcription factor, putative, expressed K14431: transcription factor TGA
17 Sobic.001G193700 oxidoreductase, aldo/keto reductase family protein, putative, expressed K05275: pyridoxine 4-dehydrogenase
18 Sobic.001G169000 expressed protein -
19 Sobic.002G334900 S-domain receptor-like protein kinase, putative, expressed -
20 Sobic.007G226000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase


Gene co-expression network
sample Sobic008G134500 Sobic008G134500 Sobic007G114650 Sobic007G114650 Sobic008G134500--Sobic007G114650 Sobic010G242000 Sobic010G242000 Sobic008G134500--Sobic010G242000 Sobic007G185000 Sobic007G185000 Sobic008G134500--Sobic007G185000 Sobic008G159800 Sobic008G159800 Sobic008G134500--Sobic008G159800 Sobic005G025400 Sobic005G025400 Sobic008G134500--Sobic005G025400 Sobic009G187900 Sobic009G187900 Sobic008G134500--Sobic009G187900 Sobic003G440500 Sobic003G440500 Sobic008G134500--Sobic003G440500 Sobic006G170800 Sobic006G170800 Sobic008G134500--Sobic006G170800 Sobic007G165100 Sobic007G165100 Sobic008G134500--Sobic007G165100 Sobic010G278400 Sobic010G278400 Sobic007G114650--Sobic010G278400 Sobic007G114650--Sobic010G242000 Sobic007G114650--Sobic008G134500 Sobic009G181900 Sobic009G181900 Sobic007G114650--Sobic009G181900 Sobic007G114650--Sobic005G025400 Sobic003G250340 Sobic003G250340 Sobic007G114650--Sobic003G250340 Sobic007G114650--Sobic003G440500 Sobic003G130650 Sobic003G130650 Sobic007G114650--Sobic003G130650 Sobic001G087500 Sobic001G087500 Sobic007G114650--Sobic001G087500 Sobic010G242000--Sobic005G025400 Sobic010G242000--Sobic006G170800 Sobic010G242000--Sobic008G159800 Sobic010G242000--Sobic007G114650 Sobic002G399000 Sobic002G399000 Sobic010G242000--Sobic002G399000 Sobic010G242000--Sobic003G440500 Sobic001G350300 Sobic001G350300 Sobic010G242000--Sobic001G350300 Sobic010G242000--Sobic008G134500 Sobic002G320700 Sobic002G320700 Sobic010G242000--Sobic002G320700 Sobic002G377400 Sobic002G377400 Sobic007G185000--Sobic002G377400 Sobic003G308900 Sobic003G308900 Sobic007G185000--Sobic003G308900 Sobic003G243750 Sobic003G243750 Sobic007G185000--Sobic003G243750 Sobic007G185000--Sobic003G440500 Sobic009G203600 Sobic009G203600 Sobic007G185000--Sobic009G203600 Sobic007G185000--Sobic007G165100 Sobic007G226000 Sobic007G226000 Sobic007G185000--Sobic007G226000 Sobic009G047033 Sobic009G047033 Sobic007G185000--Sobic009G047033 Sobic010G249600 Sobic010G249600 Sobic007G185000--Sobic010G249600 Sobic008G159800--Sobic010G242000 Sobic008G159800--Sobic005G025400 Sobic008G159800--Sobic003G440500 Sobic005G090700 Sobic005G090700 Sobic008G159800--Sobic005G090700 Sobic008G159800--Sobic007G185000 Sobic005G014400 Sobic005G014400 Sobic008G159800--Sobic005G014400 Sobic008G159800--Sobic003G308900 Sobic008G159800--Sobic002G377400 Sobic003G336600 Sobic003G336600 Sobic008G159800--Sobic003G336600 Sobic005G025400--Sobic010G242000 Sobic005G025400--Sobic003G440500 Sobic005G025400--Sobic002G399000 Sobic005G025400--Sobic006G170800 Sobic005G025400--Sobic001G350300 Sobic009G223900 Sobic009G223900 Sobic005G025400--Sobic009G223900 Sobic002G085600 Sobic002G085600 Sobic005G025400--Sobic002G085600 Sobic004G202750 Sobic004G202750 Sobic005G025400--Sobic004G202750 Sobic001G350800 Sobic001G350800 Sobic005G025400--Sobic001G350800 Sobic004G162600 Sobic004G162600 Sobic009G187900--Sobic004G162600 Sobic009G187900--Sobic003G250340 Sobic009G187900--Sobic001G087500 Sobic005G038700 Sobic005G038700 Sobic009G187900--Sobic005G038700 Sobic009G187900--Sobic010G278400 Sobic004G244500 Sobic004G244500 Sobic009G187900--Sobic004G244500 Sobic006G260101 Sobic006G260101 Sobic009G187900--Sobic006G260101 Sobic002G334900 Sobic002G334900 Sobic009G187900--Sobic002G334900 Sobic004G205400 Sobic004G205400 Sobic009G187900--Sobic004G205400 Sobic003G440500--Sobic010G249600 Sobic003G440500--Sobic002G377400 Sobic003G440500--Sobic009G223900 Sobic003G440500--Sobic005G025400 Sobic003G440500--Sobic007G185000 Sobic003G440500--Sobic010G242000 Sobic003G440500--Sobic003G308900 Sobic003G440500--Sobic002G399000 Sobic003G440500--Sobic009G181900 Sobic006G170800--Sobic001G350300 Sobic006G170800--Sobic002G320700 Sobic004G305300 Sobic004G305300 Sobic006G170800--Sobic004G305300 Sobic006G170800--Sobic002G399000 Sobic006G170800--Sobic010G242000 Sobic004G350600 Sobic004G350600 Sobic006G170800--Sobic004G350600 Sobic006G170800--Sobic004G202750 Sobic001G104100 Sobic001G104100 Sobic006G170800--Sobic001G104100 Sobic006G170800--Sobic005G025400 Sobic007G165100--Sobic003G130650 Sobic007G165100--Sobic007G185000 Sobic001G082700 Sobic001G082700 Sobic007G165100--Sobic001G082700 Sobic007G165100--Sobic005G038700 Sobic007G165100--Sobic008G159800 Sobic007G165100--Sobic003G243750 Sobic007G165100--Sobic002G377400 Sobic007G165100--Sobic009G203600 Sobic003G091900 Sobic003G091900 Sobic007G165100--Sobic003G091900
Octagon: transcription factors


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