Gene annotation
Transcriptome id Sobic.001G193700.3,Sobic.001G193700.2,Sobic.001G193700.1
Synonym Sb01g017070
Functional annotation oxidoreductase, aldo/keto reductase family protein, putative, expressed
UniProt A0A1Z5S6E5 , A0A1Z5S6G7 , C5WVD5
Pfam PF00248
Panther DB PTHR11732 PTHR11732:SF248
NCBI CDD KOG1575; Voltage-gated shaker-like K+ channel, subunit beta/KCNAB
KEGG Orthology K05275; pyridoxine 4-dehydrogenase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G53580 : NAD(P)-linked oxidoreductase superfamily protein
RAP-DB (Rice) LOC_Os10g37330.1 : oxidoreductase, aldo/keto reductase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a017420
Brachypodium PNT67722 , PNT67723 , KQJ97466 , KQJ97467
Barley HORVU1Hr1G047820.1 , HORVU1Hr1G047820.2 , HORVU1Hr1G047820.3 , HORVU1Hr1G047820.4 , HORVU1Hr1G047820.5
Wheat TraesCS1D02G184400 , TraesCS1B02G199700 , TraesCS1A02G180800 , TraesCS1A02G180800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G130650 - -
2 Sobic.004G267950 - -
3 Sobic.010G054400 leucine-rich repeat family protein, putative, expressed -
4 Sobic.007G114650 - -
5 Sobic.010G242000 phytosulfokine receptor precursor, putative, expressed -
6 Sobic.010G213100 RNA-dependent RNA polymerase, putative, expressed K11699: RDR, RNA-dependent RNA polymerase
7 Sobic.008G134500 protein kinase domain containing protein, expressed -
8 Sobic.003G091900 - -
9 Sobic.001G082700 TKL_IRAK_CrRLK1L-1.1 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
10 Sobic.002G377400 cysteine-rich receptor-like protein kinase 16 precursor, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
11 Sobic.007G165100 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
12 Sobic.003G418900 expressed protein -
13 Sobic.008G159800 - -
14 Sobic.003G243750 - -
15 Sobic.007G185000 leucine rich repeat protein, putative, expressed -
16 Sobic.005G025400 CAMK_CAMK_like.42 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
17 Sobic.006G165501 - -
18 Sobic.008G151900 expressed protein -
19 Sobic.007G182400 - -
20 Sobic.004G345200 OsWAK11 - OsWAK receptor-like protein kinase, expressed -


Gene co-expression network
sample Sobic001G193700 Sobic001G193700 Sobic003G130650 Sobic003G130650 Sobic001G193700--Sobic003G130650 Sobic004G267950 Sobic004G267950 Sobic001G193700--Sobic004G267950 Sobic010G054400 Sobic010G054400 Sobic001G193700--Sobic010G054400 Sobic007G114650 Sobic007G114650 Sobic001G193700--Sobic007G114650 Sobic010G242000 Sobic010G242000 Sobic001G193700--Sobic010G242000 Sobic010G213100 Sobic010G213100 Sobic001G193700--Sobic010G213100 Sobic008G134500 Sobic008G134500 Sobic001G193700--Sobic008G134500 Sobic003G091900 Sobic003G091900 Sobic001G193700--Sobic003G091900 Sobic001G082700 Sobic001G082700 Sobic001G193700--Sobic001G082700 Sobic003G250340 Sobic003G250340 Sobic003G130650--Sobic003G250340 Sobic008G045300 Sobic008G045300 Sobic003G130650--Sobic008G045300 Sobic003G243750 Sobic003G243750 Sobic003G130650--Sobic003G243750 Sobic007G165100 Sobic007G165100 Sobic003G130650--Sobic007G165100 Sobic002G152000 Sobic002G152000 Sobic003G130650--Sobic002G152000 Sobic003G130650--Sobic007G114650 Sobic005G038700 Sobic005G038700 Sobic003G130650--Sobic005G038700 Sobic003G333150 Sobic003G333150 Sobic003G130650--Sobic003G333150 Sobic009G203600 Sobic009G203600 Sobic003G130650--Sobic009G203600 Sobic004G267950--Sobic001G193700 Sobic008G151900 Sobic008G151900 Sobic004G267950--Sobic008G151900 Sobic004G267950--Sobic002G152000 Sobic004G267950--Sobic003G130650 Sobic004G267950--Sobic003G243750 Sobic003G033300 Sobic003G033300 Sobic004G267950--Sobic003G033300 Sobic004G267950--Sobic010G054400 Sobic002G377400 Sobic002G377400 Sobic004G267950--Sobic002G377400 Sobic002G350800 Sobic002G350800 Sobic004G267950--Sobic002G350800 Sobic007G182400 Sobic007G182400 Sobic010G054400--Sobic007G182400 Sobic010G054400--Sobic010G213100 Sobic001G062000 Sobic001G062000 Sobic010G054400--Sobic001G062000 Sobic004G343733 Sobic004G343733 Sobic010G054400--Sobic004G343733 Sobic010G160850 Sobic010G160850 Sobic010G054400--Sobic010G160850 Sobic010G054400--Sobic003G091900 Sobic010G054400--Sobic001G193700 Sobic010G054400--Sobic002G377400 Sobic001G486400 Sobic001G486400 Sobic010G054400--Sobic001G486400 Sobic010G278400 Sobic010G278400 Sobic007G114650--Sobic010G278400 Sobic007G114650--Sobic010G242000 Sobic007G114650--Sobic008G134500 Sobic009G181900 Sobic009G181900 Sobic007G114650--Sobic009G181900 Sobic005G025400 Sobic005G025400 Sobic007G114650--Sobic005G025400 Sobic007G114650--Sobic003G250340 Sobic003G440500 Sobic003G440500 Sobic007G114650--Sobic003G440500 Sobic007G114650--Sobic003G130650 Sobic001G087500 Sobic001G087500 Sobic007G114650--Sobic001G087500 Sobic010G242000--Sobic005G025400 Sobic006G170800 Sobic006G170800 Sobic010G242000--Sobic006G170800 Sobic008G159800 Sobic008G159800 Sobic010G242000--Sobic008G159800 Sobic010G242000--Sobic007G114650 Sobic002G399000 Sobic002G399000 Sobic010G242000--Sobic002G399000 Sobic010G242000--Sobic003G440500 Sobic001G350300 Sobic001G350300 Sobic010G242000--Sobic001G350300 Sobic010G242000--Sobic008G134500 Sobic002G320700 Sobic002G320700 Sobic010G242000--Sobic002G320700 Sobic010G213100--Sobic003G091900 Sobic010G213100--Sobic010G054400 Sobic010G213100--Sobic001G062000 Sobic010G213100--Sobic007G182400 Sobic003G308900 Sobic003G308900 Sobic010G213100--Sobic003G308900 Sobic003G336600 Sobic003G336600 Sobic010G213100--Sobic003G336600 Sobic009G047033 Sobic009G047033 Sobic010G213100--Sobic009G047033 Sobic010G213100--Sobic002G377400 Sobic010G213100--Sobic004G343733 Sobic008G134500--Sobic007G114650 Sobic008G134500--Sobic010G242000 Sobic007G185000 Sobic007G185000 Sobic008G134500--Sobic007G185000 Sobic008G134500--Sobic008G159800 Sobic008G134500--Sobic005G025400 Sobic009G187900 Sobic009G187900 Sobic008G134500--Sobic009G187900 Sobic008G134500--Sobic003G440500 Sobic008G134500--Sobic006G170800 Sobic008G134500--Sobic007G165100 Sobic003G091900--Sobic010G213100 Sobic003G091900--Sobic007G182400 Sobic003G091900--Sobic009G047033 Sobic003G091900--Sobic001G062000 Sobic003G056900 Sobic003G056900 Sobic003G091900--Sobic003G056900 Sobic003G091900--Sobic010G054400 Sobic003G091900--Sobic002G377400 Sobic003G091900--Sobic003G336600 Sobic003G091900--Sobic007G185000 Sobic003G301950 Sobic003G301950 Sobic001G082700--Sobic003G301950 Sobic001G082700--Sobic007G165100 Sobic006G082100 Sobic006G082100 Sobic001G082700--Sobic006G082100 Sobic008G075500 Sobic008G075500 Sobic001G082700--Sobic008G075500 Sobic002G387000 Sobic002G387000 Sobic001G082700--Sobic002G387000 Sobic001G082700--Sobic010G242000 Sobic006G280250 Sobic006G280250 Sobic001G082700--Sobic006G280250 Sobic001G082700--Sobic008G159800 Sobic004G091300 Sobic004G091300 Sobic001G082700--Sobic004G091300
Octagon: transcription factors


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