Gene annotation
Transcriptome id Sobic.010G054400.1
Synonym Sb10g004760
Functional annotation leucine-rich repeat family protein, putative, expressed
UniProt A0A1W0VRJ8
Pfam PF08263 PF00560 PF00069
Panther DB PTHR27000 PTHR27000:SF98
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G47570 : Leucine-rich repeat protein kinase family protein
RAP-DB (Rice) LOC_Os07g03990.1 : leucine-rich repeat family protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium PNT63060 , PNT63061 , KQJ87419 , KQK12072
Barley HORVU4Hr1G089460.1
Wheat TraesCS5B02G541000 , TraesCSU02G260100 , TraesCS7D02G053400 , TraesCSU02G160500 , TraesCSU02G203400 , TraesCS3B02G030000 , TraesCS2B02G608600 , TraesCS5D02G547600 , TraesCS5B02G540400 , TraesCS5D02G546900 , TraesCSU02G189800 , TraesCS3D02G028000 , TraesCS3A02G016800 , TraesCS3A02G016800 , TraesCS5D02G444700 , TraesCS4A02G327100 , TraesCS3A02G072300 , TraesCS5D02G547500 , TraesCS5D02G548100 , TraesCS3D02G013700 , TraesCSU02G044000 , TraesCS6A02G022400 , TraesCS7A02G058900 , TraesCS4A02G430400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G182400 - -
2 Sobic.010G213100 RNA-dependent RNA polymerase, putative, expressed K11699: RDR, RNA-dependent RNA polymerase
3 Sobic.001G062000 - -
4 Sobic.004G343733 - -
5 Sobic.010G160850 - -
6 Sobic.003G091900 - -
7 Sobic.001G193700 oxidoreductase, aldo/keto reductase family protein, putative, expressed K05275: pyridoxine 4-dehydrogenase
8 Sobic.002G377400 cysteine-rich receptor-like protein kinase 16 precursor, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
9 Sobic.001G486400 - -
10 Sobic.006G165501 - -
11 Sobic.008G065700 RNA recognition motif containing protein, expressed -
12 Sobic.003G308900 expressed protein -
13 Sobic.001G529301 - -
14 Sobic.005G150501 - -
15 Sobic.005G090700 - -
16 Sobic.006G268100 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
17 Sobic.006G075200 Aluminium activated malate transporter("PubMedID : 26759170,PubMedID : 24597475")@aluminum-activated malate transporter, putative, expressed -
18 Sobic.008G128800 RNA pseudouridine synthase, putative, expressed -
19 Sobic.001G506066 - -
20 Sobic.004G267950 - -


Gene co-expression network
sample Sobic010G054400 Sobic010G054400 Sobic007G182400 Sobic007G182400 Sobic010G054400--Sobic007G182400 Sobic010G213100 Sobic010G213100 Sobic010G054400--Sobic010G213100 Sobic001G062000 Sobic001G062000 Sobic010G054400--Sobic001G062000 Sobic004G343733 Sobic004G343733 Sobic010G054400--Sobic004G343733 Sobic010G160850 Sobic010G160850 Sobic010G054400--Sobic010G160850 Sobic003G091900 Sobic003G091900 Sobic010G054400--Sobic003G091900 Sobic001G193700 Sobic001G193700 Sobic010G054400--Sobic001G193700 Sobic002G377400 Sobic002G377400 Sobic010G054400--Sobic002G377400 Sobic001G486400 Sobic001G486400 Sobic010G054400--Sobic001G486400 Sobic007G182400--Sobic001G062000 Sobic007G182400--Sobic010G054400 Sobic007G182400--Sobic003G091900 Sobic007G182400--Sobic010G213100 Sobic007G182400--Sobic004G343733 Sobic009G047033 Sobic009G047033 Sobic007G182400--Sobic009G047033 Sobic007G182400--Sobic010G160850 Sobic007G182400--Sobic002G377400 Sobic001G529301 Sobic001G529301 Sobic007G182400--Sobic001G529301 Sobic010G213100--Sobic003G091900 Sobic010G213100--Sobic010G054400 Sobic010G213100--Sobic001G062000 Sobic010G213100--Sobic007G182400 Sobic003G308900 Sobic003G308900 Sobic010G213100--Sobic003G308900 Sobic003G336600 Sobic003G336600 Sobic010G213100--Sobic003G336600 Sobic010G213100--Sobic009G047033 Sobic010G213100--Sobic002G377400 Sobic010G213100--Sobic004G343733 Sobic001G062000--Sobic007G182400 Sobic001G062000--Sobic010G054400 Sobic001G062000--Sobic003G091900 Sobic001G062000--Sobic010G213100 Sobic001G062000--Sobic004G343733 Sobic009G079700 Sobic009G079700 Sobic001G062000--Sobic009G079700 Sobic001G062000--Sobic002G377400 Sobic001G062000--Sobic001G529301 Sobic003G056900 Sobic003G056900 Sobic001G062000--Sobic003G056900 Sobic004G343733--Sobic010G054400 Sobic002G180200 Sobic002G180200 Sobic004G343733--Sobic002G180200 Sobic004G343733--Sobic009G047033 Sobic001G070900 Sobic001G070900 Sobic004G343733--Sobic001G070900 Sobic004G343733--Sobic007G182400 Sobic004G343733--Sobic010G213100 Sobic004G343733--Sobic001G062000 Sobic004G343733--Sobic009G079700 Sobic004G343733--Sobic003G091900 Sobic002G398300 Sobic002G398300 Sobic010G160850--Sobic002G398300 Sobic007G133733 Sobic007G133733 Sobic010G160850--Sobic007G133733 Sobic008G128800 Sobic008G128800 Sobic010G160850--Sobic008G128800 Sobic003G312800 Sobic003G312800 Sobic010G160850--Sobic003G312800 Sobic005G150501 Sobic005G150501 Sobic010G160850--Sobic005G150501 Sobic010G160850--Sobic010G054400 Sobic001G239000 Sobic001G239000 Sobic010G160850--Sobic001G239000 Sobic002G326300 Sobic002G326300 Sobic010G160850--Sobic002G326300 Sobic006G248450 Sobic006G248450 Sobic010G160850--Sobic006G248450 Sobic003G091900--Sobic010G213100 Sobic003G091900--Sobic007G182400 Sobic003G091900--Sobic009G047033 Sobic003G091900--Sobic001G062000 Sobic003G091900--Sobic003G056900 Sobic003G091900--Sobic010G054400 Sobic003G091900--Sobic002G377400 Sobic003G091900--Sobic003G336600 Sobic007G185000 Sobic007G185000 Sobic003G091900--Sobic007G185000 Sobic003G130650 Sobic003G130650 Sobic001G193700--Sobic003G130650 Sobic004G267950 Sobic004G267950 Sobic001G193700--Sobic004G267950 Sobic001G193700--Sobic010G054400 Sobic007G114650 Sobic007G114650 Sobic001G193700--Sobic007G114650 Sobic010G242000 Sobic010G242000 Sobic001G193700--Sobic010G242000 Sobic001G193700--Sobic010G213100 Sobic008G134500 Sobic008G134500 Sobic001G193700--Sobic008G134500 Sobic001G193700--Sobic003G091900 Sobic001G082700 Sobic001G082700 Sobic001G193700--Sobic001G082700 Sobic002G377400--Sobic003G308900 Sobic002G377400--Sobic007G185000 Sobic003G440500 Sobic003G440500 Sobic002G377400--Sobic003G440500 Sobic003G243750 Sobic003G243750 Sobic002G377400--Sobic003G243750 Sobic010G249600 Sobic010G249600 Sobic002G377400--Sobic010G249600 Sobic002G296800 Sobic002G296800 Sobic002G377400--Sobic002G296800 Sobic002G398600 Sobic002G398600 Sobic002G377400--Sobic002G398600 Sobic003G262500 Sobic003G262500 Sobic002G377400--Sobic003G262500 Sobic008G065700 Sobic008G065700 Sobic002G377400--Sobic008G065700 Sobic002G262250 Sobic002G262250 Sobic001G486400--Sobic002G262250 Sobic010G228800 Sobic010G228800 Sobic001G486400--Sobic010G228800 Sobic001G486400--Sobic002G326300 Sobic001G174200 Sobic001G174200 Sobic001G486400--Sobic001G174200 Sobic005G198150 Sobic005G198150 Sobic001G486400--Sobic005G198150 Sobic010G274700 Sobic010G274700 Sobic001G486400--Sobic010G274700 Sobic001G221700 Sobic001G221700 Sobic001G486400--Sobic001G221700 Sobic008G187450 Sobic008G187450 Sobic001G486400--Sobic008G187450 Sobic008G060800 Sobic008G060800 Sobic001G486400--Sobic008G060800
Octagon: transcription factors


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