Gene annotation
Transcriptome id Sobic.006G165501.1
Synonym -
Functional annotation -
UniProt A0A1Z5REQ2
Pfam PF00538
Panther DB PTHR11467 PTHR11467:SF41
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006334; nucleosome assembly GO:0005634nucleus GO:0003677DNA binding GO:0000786nucleosome


Orthologs (automatic annotation)
TAIR AT5G08780 : winged-helix DNA-binding transcription factor family protein
RAP-DB (Rice) LOC_Os06g04020.1 : histone H1, putative, expressed
MaizeGDB (Corn) Zm00025a010367 , Zm00025a056652
Brachypodium PNT61589
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G086900 receptor kinase, putative, expressed -
2 Sobic.001G187900 disease resistance protein, putative, expressed -
3 Sobic.010G042300 DTA2, putative, expressed -
4 Sobic.005G014400 esterase, putative, expressed -
5 Sobic.003G053750 - -
6 Sobic.008G170800 OsWAK126 - OsWAK receptor-like protein kinase, expressed -
7 Sobic.001G093732 - -
8 Sobic.007G137750 - -
9 Sobic.005G182100 Leucine Rich Repeat family protein, expressed -
10 Sobic.006G215650 - -
11 Sobic.006G279100 Positive regulator of ABA(PubMedID : 30367619)@CAMK_CAMK_like.28 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
12 Sobic.007G194000 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
13 Sobic.003G276400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Alpha-amylase isozime 2 precursor AMY3 (Os)(PubMedID : 27208977)@alpha-amylase precursor, putative, expressed -
14 Sobic.001G090700 expressed protein -
15 Sobic.002G208301 - K05387: glutamate receptor, ionotropic, plant
16 Sobic.007G052000 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
17 Sobic.002G208700 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
18 Sobic.010G054150 - -
19 Sobic.009G252500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial chaperone BCS1, putative, expressed K08900: mitochondrial chaperone BCS1
20 Sobic.003G001650 - -


Gene co-expression network
sample Sobic006G165501 Sobic006G165501 Sobic002G086900 Sobic002G086900 Sobic006G165501--Sobic002G086900 Sobic001G187900 Sobic001G187900 Sobic006G165501--Sobic001G187900 Sobic010G042300 Sobic010G042300 Sobic006G165501--Sobic010G042300 Sobic005G014400 Sobic005G014400 Sobic006G165501--Sobic005G014400 Sobic003G053750 Sobic003G053750 Sobic006G165501--Sobic003G053750 Sobic008G170800 Sobic008G170800 Sobic006G165501--Sobic008G170800 Sobic001G093732 Sobic001G093732 Sobic006G165501--Sobic001G093732 Sobic007G137750 Sobic007G137750 Sobic006G165501--Sobic007G137750 Sobic005G182100 Sobic005G182100 Sobic006G165501--Sobic005G182100 Sobic002G086900--Sobic001G187900 Sobic002G086900--Sobic006G165501 Sobic002G046150 Sobic002G046150 Sobic002G086900--Sobic002G046150 Sobic006G215650 Sobic006G215650 Sobic002G086900--Sobic006G215650 Sobic002G086900--Sobic010G042300 Sobic007G149500 Sobic007G149500 Sobic002G086900--Sobic007G149500 Sobic001G074601 Sobic001G074601 Sobic002G086900--Sobic001G074601 Sobic002G208700 Sobic002G208700 Sobic002G086900--Sobic002G208700 Sobic006G228833 Sobic006G228833 Sobic002G086900--Sobic006G228833 Sobic001G187900--Sobic002G086900 Sobic001G187900--Sobic007G149500 Sobic001G187900--Sobic002G208700 Sobic007G137100 Sobic007G137100 Sobic001G187900--Sobic007G137100 Sobic001G187900--Sobic006G215650 Sobic001G187900--Sobic010G042300 Sobic001G187900--Sobic002G046150 Sobic001G187900--Sobic006G165501 Sobic003G329300 Sobic003G329300 Sobic001G187900--Sobic003G329300 Sobic006G279100 Sobic006G279100 Sobic010G042300--Sobic006G279100 Sobic001G090700 Sobic001G090700 Sobic010G042300--Sobic001G090700 Sobic010G042300--Sobic008G170800 Sobic008G103400 Sobic008G103400 Sobic010G042300--Sobic008G103400 Sobic003G001650 Sobic003G001650 Sobic010G042300--Sobic003G001650 Sobic010G042300--Sobic002G208700 Sobic001G383200 Sobic001G383200 Sobic010G042300--Sobic001G383200 Sobic004G072201 Sobic004G072201 Sobic010G042300--Sobic004G072201 Sobic002G309300 Sobic002G309300 Sobic010G042300--Sobic002G309300 Sobic003G251900 Sobic003G251900 Sobic005G014400--Sobic003G251900 Sobic005G014400--Sobic001G093732 Sobic004G181000 Sobic004G181000 Sobic005G014400--Sobic004G181000 Sobic001G350800 Sobic001G350800 Sobic005G014400--Sobic001G350800 Sobic005G014400--Sobic006G165501 Sobic009G112500 Sobic009G112500 Sobic005G014400--Sobic009G112500 Sobic005G025400 Sobic005G025400 Sobic005G014400--Sobic005G025400 Sobic008G016800 Sobic008G016800 Sobic005G014400--Sobic008G016800 Sobic001G113400 Sobic001G113400 Sobic005G014400--Sobic001G113400 Sobic004G030850 Sobic004G030850 Sobic003G053750--Sobic004G030850 Sobic003G429600 Sobic003G429600 Sobic003G053750--Sobic003G429600 Sobic009G137401 Sobic009G137401 Sobic003G053750--Sobic009G137401 Sobic006G021100 Sobic006G021100 Sobic003G053750--Sobic006G021100 Sobic009G176100 Sobic009G176100 Sobic003G053750--Sobic009G176100 Sobic002G033200 Sobic002G033200 Sobic003G053750--Sobic002G033200 Sobic003G053750--Sobic003G329300 Sobic001G191500 Sobic001G191500 Sobic003G053750--Sobic001G191500 Sobic008G113200 Sobic008G113200 Sobic003G053750--Sobic008G113200 Sobic008G170800--Sobic001G090700 Sobic006G157450 Sobic006G157450 Sobic008G170800--Sobic006G157450 Sobic001G038700 Sobic001G038700 Sobic008G170800--Sobic001G038700 Sobic010G012200 Sobic010G012200 Sobic008G170800--Sobic010G012200 Sobic008G190600 Sobic008G190600 Sobic008G170800--Sobic008G190600 Sobic003G155000 Sobic003G155000 Sobic008G170800--Sobic003G155000 Sobic001G454600 Sobic001G454600 Sobic008G170800--Sobic001G454600 Sobic008G142200 Sobic008G142200 Sobic008G170800--Sobic008G142200 Sobic003G253700 Sobic003G253700 Sobic008G170800--Sobic003G253700 Sobic009G252600 Sobic009G252600 Sobic001G093732--Sobic009G252600 Sobic010G201444 Sobic010G201444 Sobic001G093732--Sobic010G201444 Sobic001G093732--Sobic003G251900 Sobic001G093732--Sobic005G014400 Sobic008G007200 Sobic008G007200 Sobic001G093732--Sobic008G007200 Sobic001G483001 Sobic001G483001 Sobic001G093732--Sobic001G483001 Sobic007G046600 Sobic007G046600 Sobic001G093732--Sobic007G046600 Sobic006G154900 Sobic006G154900 Sobic001G093732--Sobic006G154900 Sobic001G093732--Sobic006G279100 Sobic010G054150 Sobic010G054150 Sobic007G137750--Sobic010G054150 Sobic002G290800 Sobic002G290800 Sobic007G137750--Sobic002G290800 Sobic007G137750--Sobic006G165501 Sobic007G137750--Sobic003G001650 Sobic006G248450 Sobic006G248450 Sobic007G137750--Sobic006G248450 Sobic004G070150 Sobic004G070150 Sobic007G137750--Sobic004G070150 Sobic006G268100 Sobic006G268100 Sobic007G137750--Sobic006G268100 Sobic007G137750--Sobic010G042300 Sobic003G304000 Sobic003G304000 Sobic007G137750--Sobic003G304000 Sobic005G182100--Sobic007G137100 Sobic005G182100--Sobic003G329300 Sobic007G016200 Sobic007G016200 Sobic005G182100--Sobic007G016200 Sobic004G203633 Sobic004G203633 Sobic005G182100--Sobic004G203633 Sobic005G182100--Sobic002G033200 Sobic004G118300 Sobic004G118300 Sobic005G182100--Sobic004G118300 Sobic005G182100--Sobic001G090700 Sobic010G274700 Sobic010G274700 Sobic005G182100--Sobic010G274700 Sobic005G182100--Sobic009G137401
Octagon: transcription factors


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