Gene annotation
Transcriptome id Sobic.008G065700.2
Synonym Sb08g005469
Functional annotation RNA recognition motif containing protein, expressed
UniProt C5YTB3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g27030.1 : RNA recognition motif containing protein, expressed
MaizeGDB (Corn) Zm00025a002710
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G149400 lipase, putative, expressed -
2 Sobic.004G224000 - -
3 Sobic.005G110553 - -
4 Sobic.001G367900 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@annexin, putative, expressed -
5 Sobic.003G092150 - -
6 Sobic.007G226000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
7 Sobic.009G122000 Annexin arabidopsis 3(PubMedID : 26320239)@annexin, putative, expressed -
8 Sobic.007G210200 Highest expression level in seeds(PubMedID : 27501690)@OsSPL14 - SBP-box gene family member, expressed -
9 Sobic.002G377400 cysteine-rich receptor-like protein kinase 16 precursor, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
10 Sobic.010G249600 macrophage migration inhibitory factor, putative, expressed -
11 Sobic.007G010400 - -
12 Sobic.003G308900 expressed protein -
13 Sobic.002G085600 - -
14 Sobic.003G440500 YGGT family protein, putative, expressed K02221: YggT family protein
15 Sobic.002G398600 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
16 Sobic.002G001500 pentatricopeptide containing protein, putative, expressed -
17 Sobic.009G223900 protein binding protein, putative, expressed -
18 Sobic.002G274000 OsSub59 - Putative Subtilisin homologue, expressed -
19 Sobic.003G050800 Glucose-6-phosphate/phosphate translocator-related(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@phosphate/phosphoenolpyruvate translocator-related protein, putative, expressed K15283: solute carrier family 35, member E1
20 Sobic.001G503700 DUF677 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic008G065700 Sobic008G065700 Sobic003G149400 Sobic003G149400 Sobic008G065700--Sobic003G149400 Sobic004G224000 Sobic004G224000 Sobic008G065700--Sobic004G224000 Sobic005G110553 Sobic005G110553 Sobic008G065700--Sobic005G110553 Sobic001G367900 Sobic001G367900 Sobic008G065700--Sobic001G367900 Sobic003G092150 Sobic003G092150 Sobic008G065700--Sobic003G092150 Sobic007G226000 Sobic007G226000 Sobic008G065700--Sobic007G226000 Sobic009G122000 Sobic009G122000 Sobic008G065700--Sobic009G122000 Sobic007G210200 Sobic007G210200 Sobic008G065700--Sobic007G210200 Sobic002G377400 Sobic002G377400 Sobic008G065700--Sobic002G377400 Sobic003G149400--Sobic004G224000 Sobic007G010400 Sobic007G010400 Sobic003G149400--Sobic007G010400 Sobic003G149400--Sobic008G065700 Sobic003G149400--Sobic009G122000 Sobic003G149400--Sobic005G110553 Sobic001G503700 Sobic001G503700 Sobic003G149400--Sobic001G503700 Sobic003G149400--Sobic001G367900 Sobic002G001500 Sobic002G001500 Sobic003G149400--Sobic002G001500 Sobic001G424650 Sobic001G424650 Sobic003G149400--Sobic001G424650 Sobic004G224000--Sobic003G149400 Sobic004G224000--Sobic008G065700 Sobic004G224000--Sobic009G122000 Sobic004G224000--Sobic001G424650 Sobic004G224000--Sobic005G110553 Sobic010G249600 Sobic010G249600 Sobic004G224000--Sobic010G249600 Sobic001G492400 Sobic001G492400 Sobic004G224000--Sobic001G492400 Sobic004G224000--Sobic001G503700 Sobic006G118150 Sobic006G118150 Sobic004G224000--Sobic006G118150 Sobic005G110553--Sobic009G122000 Sobic005G110553--Sobic001G424650 Sobic005G110553--Sobic003G149400 Sobic006G268100 Sobic006G268100 Sobic005G110553--Sobic006G268100 Sobic005G110553--Sobic008G065700 Sobic005G110553--Sobic004G224000 Sobic001G334400 Sobic001G334400 Sobic005G110553--Sobic001G334400 Sobic009G183650 Sobic009G183650 Sobic005G110553--Sobic009G183650 Sobic005G110553--Sobic007G210200 Sobic001G367900--Sobic007G010400 Sobic001G367900--Sobic003G149400 Sobic001G367900--Sobic008G065700 Sobic001G367900--Sobic007G210200 Sobic003G331200 Sobic003G331200 Sobic001G367900--Sobic003G331200 Sobic004G000500 Sobic004G000500 Sobic001G367900--Sobic004G000500 Sobic001G367900--Sobic007G226000 Sobic001G367900--Sobic003G092150 Sobic001G367900--Sobic009G122000 Sobic003G092150--Sobic008G065700 Sobic003G092150--Sobic007G210200 Sobic003G092150--Sobic001G367900 Sobic003G092150--Sobic003G149400 Sobic008G119100 Sobic008G119100 Sobic003G092150--Sobic008G119100 Sobic009G047033 Sobic009G047033 Sobic003G092150--Sobic009G047033 Sobic003G092150--Sobic007G226000 Sobic002G076450 Sobic002G076450 Sobic003G092150--Sobic002G076450 Sobic003G092150--Sobic005G110553 Sobic007G226000--Sobic008G065700 Sobic007G185000 Sobic007G185000 Sobic007G226000--Sobic007G185000 Sobic007G226000--Sobic010G249600 Sobic007G226000--Sobic004G224000 Sobic007G226000--Sobic003G149400 Sobic007G226000--Sobic001G367900 Sobic009G240300 Sobic009G240300 Sobic007G226000--Sobic009G240300 Sobic003G440500 Sobic003G440500 Sobic007G226000--Sobic003G440500 Sobic007G226000--Sobic003G092150 Sobic009G122000--Sobic005G110553 Sobic009G122000--Sobic003G149400 Sobic009G122000--Sobic001G424650 Sobic009G122000--Sobic004G224000 Sobic009G122000--Sobic007G010400 Sobic009G122000--Sobic008G065700 Sobic009G122000--Sobic007G210200 Sobic010G019500 Sobic010G019500 Sobic009G122000--Sobic010G019500 Sobic009G122000--Sobic001G367900 Sobic007G210200--Sobic001G367900 Sobic007G210200--Sobic005G110553 Sobic007G210200--Sobic003G149400 Sobic007G210200--Sobic009G122000 Sobic007G210200--Sobic008G065700 Sobic007G210200--Sobic003G092150 Sobic007G210200--Sobic004G224000 Sobic007G210200--Sobic004G000500 Sobic007G210200--Sobic003G331200 Sobic003G308900 Sobic003G308900 Sobic002G377400--Sobic003G308900 Sobic002G377400--Sobic007G185000 Sobic002G377400--Sobic003G440500 Sobic003G243750 Sobic003G243750 Sobic002G377400--Sobic003G243750 Sobic002G377400--Sobic010G249600 Sobic002G296800 Sobic002G296800 Sobic002G377400--Sobic002G296800 Sobic002G398600 Sobic002G398600 Sobic002G377400--Sobic002G398600 Sobic003G262500 Sobic003G262500 Sobic002G377400--Sobic003G262500 Sobic002G377400--Sobic008G065700
Octagon: transcription factors


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