Gene annotation
Transcriptome id Sobic.007G210200.2,Sobic.007G210200.1
Synonym SPL9, Sb07g027740, SbSBP15
Functional annotation Highest expression level in seeds (PubMedID : 27501690)
OsSPL14 - SBP-box gene family member, expressed
UniProt C5YIS0 , A0A1B6PIW1
Pfam PF03110
Panther DB PTHR31251 PTHR31251:SF23
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005634; nucleus GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT2G42200 : squamosa promoter binding protein-like 9
RAP-DB (Rice) LOC_Os08g39890.1 : OsSPL14 - SBP-box gene family member, expressed
MaizeGDB (Corn) Zm00025a033810 , Zm00025a005100 , Zm00025a039285 , Zm00025a056870 , Zm00025a047455 , Zm00025a026243 , Zm00025a030402 , Zm00025a014209
Brachypodium KQJ98926 , KQK11264 , PNT68391 , PNT68392 , PNT68393 , KQJ90760 , KQJ90761
Barley HORVU2Hr1G097610.1 , HORVU2Hr1G097610.2 , HORVU2Hr1G097580.1 , HORVU5Hr1G073440.11 , HORVU5Hr1G073440.10 , HORVU5Hr1G073440.13 , HORVU5Hr1G073440.12 , HORVU5Hr1G076380.11 , HORVU5Hr1G076380.10 , HORVU3Hr1G094730.2 , HORVU3Hr1G094730.3 , HORVU3Hr1G094730.1 , HORVU3Hr1G094730.7 , HORVU3Hr1G050350.5 , HORVU3Hr1G050350.6 , HORVU3Hr1G050350.7 , HORVU3Hr1G050350.1 , HORVU3Hr1G050350.3 , HORVU3Hr1G094730.10 , HORVU3Hr1G094730.11 , HORVU3Hr1G094730.12 , HORVU0Hr1G020810.3 , HORVU0Hr1G020810.2 , HORVU0Hr1G020810.1 , HORVU5Hr1G076380.9 , HORVU2Hr1G097580.2 , HORVU5Hr1G073440.9 , HORVU5Hr1G073440.8 , HORVU5Hr1G073440.5 , HORVU5Hr1G073440.4 , HORVU5Hr1G073440.7 , HORVU5Hr1G073440.6 , HORVU5Hr1G073440.1 , HORVU5Hr1G073440.3 , HORVU5Hr1G073440.2
Wheat TraesCS7D02G245200 , TraesCS7D02G245200 , TraesCS5D02G273900 , TraesCS5D02G273900 , TraesCS3D02G425800 , TraesCS5B02G265600 , TraesCS5B02G265600 , TraesCS7B02G144900 , TraesCS7B02G144900 , TraesCS7A02G246500 , TraesCS5A02G265900 , TraesCS5A02G265900 , TraesCS3A02G432500 , TraesCS7A02G495100 , TraesCS7A02G495100 , TraesCS3B02G468400
Populus PNT16691 , PNT16692 , PNT23751 , PNT23750 , PNT23752


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G367900 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@annexin, putative, expressed -
2 Sobic.005G110553 - -
3 Sobic.003G149400 lipase, putative, expressed -
4 Sobic.009G122000 Annexin arabidopsis 3(PubMedID : 26320239)@annexin, putative, expressed -
5 Sobic.008G065700 RNA recognition motif containing protein, expressed -
6 Sobic.003G092150 - -
7 Sobic.004G224000 - -
8 Sobic.004G000500 tetratricopeptide repeat domain containing protein, expressed K09560: suppressor of tumorigenicity protein 13
9 Sobic.003G331200 - -
10 Sobic.007G010400 - -
11 Sobic.002G037700 expressed protein K10891: fanconi anemia group D2 protein
12 Sobic.008G153300 RING-H2 finger protein ATL3J, putative, expressed K10663: E3 ubiquitin-protein ligase ATL4
13 Sobic.009G079700 C2 domain containing protein, putative, expressed -
14 Sobic.001G424650 - -
15 Sobic.007G187500 - -
16 Sobic.002G215600 BRCA1 C Terminus domain containing protein, expressed -
17 Sobic.007G226000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
18 Sobic.010G187950 - -
19 Sobic.009G183650 - -
20 Sobic.002G274000 OsSub59 - Putative Subtilisin homologue, expressed -


Gene co-expression network
sample Sobic007G210200 Sobic007G210200 Sobic001G367900 Sobic001G367900 Sobic007G210200--Sobic001G367900 Sobic005G110553 Sobic005G110553 Sobic007G210200--Sobic005G110553 Sobic003G149400 Sobic003G149400 Sobic007G210200--Sobic003G149400 Sobic009G122000 Sobic009G122000 Sobic007G210200--Sobic009G122000 Sobic008G065700 Sobic008G065700 Sobic007G210200--Sobic008G065700 Sobic003G092150 Sobic003G092150 Sobic007G210200--Sobic003G092150 Sobic004G224000 Sobic004G224000 Sobic007G210200--Sobic004G224000 Sobic004G000500 Sobic004G000500 Sobic007G210200--Sobic004G000500 Sobic003G331200 Sobic003G331200 Sobic007G210200--Sobic003G331200 Sobic007G010400 Sobic007G010400 Sobic001G367900--Sobic007G010400 Sobic001G367900--Sobic003G149400 Sobic001G367900--Sobic008G065700 Sobic001G367900--Sobic007G210200 Sobic001G367900--Sobic003G331200 Sobic001G367900--Sobic004G000500 Sobic007G226000 Sobic007G226000 Sobic001G367900--Sobic007G226000 Sobic001G367900--Sobic003G092150 Sobic001G367900--Sobic009G122000 Sobic005G110553--Sobic009G122000 Sobic001G424650 Sobic001G424650 Sobic005G110553--Sobic001G424650 Sobic005G110553--Sobic003G149400 Sobic006G268100 Sobic006G268100 Sobic005G110553--Sobic006G268100 Sobic005G110553--Sobic008G065700 Sobic005G110553--Sobic004G224000 Sobic001G334400 Sobic001G334400 Sobic005G110553--Sobic001G334400 Sobic009G183650 Sobic009G183650 Sobic005G110553--Sobic009G183650 Sobic005G110553--Sobic007G210200 Sobic003G149400--Sobic004G224000 Sobic003G149400--Sobic007G010400 Sobic003G149400--Sobic008G065700 Sobic003G149400--Sobic009G122000 Sobic003G149400--Sobic005G110553 Sobic001G503700 Sobic001G503700 Sobic003G149400--Sobic001G503700 Sobic003G149400--Sobic001G367900 Sobic002G001500 Sobic002G001500 Sobic003G149400--Sobic002G001500 Sobic003G149400--Sobic001G424650 Sobic009G122000--Sobic005G110553 Sobic009G122000--Sobic003G149400 Sobic009G122000--Sobic001G424650 Sobic009G122000--Sobic004G224000 Sobic009G122000--Sobic007G010400 Sobic009G122000--Sobic008G065700 Sobic009G122000--Sobic007G210200 Sobic010G019500 Sobic010G019500 Sobic009G122000--Sobic010G019500 Sobic009G122000--Sobic001G367900 Sobic008G065700--Sobic003G149400 Sobic008G065700--Sobic004G224000 Sobic008G065700--Sobic005G110553 Sobic008G065700--Sobic001G367900 Sobic008G065700--Sobic003G092150 Sobic008G065700--Sobic007G226000 Sobic008G065700--Sobic009G122000 Sobic008G065700--Sobic007G210200 Sobic002G377400 Sobic002G377400 Sobic008G065700--Sobic002G377400 Sobic003G092150--Sobic008G065700 Sobic003G092150--Sobic007G210200 Sobic003G092150--Sobic001G367900 Sobic003G092150--Sobic003G149400 Sobic008G119100 Sobic008G119100 Sobic003G092150--Sobic008G119100 Sobic009G047033 Sobic009G047033 Sobic003G092150--Sobic009G047033 Sobic003G092150--Sobic007G226000 Sobic002G076450 Sobic002G076450 Sobic003G092150--Sobic002G076450 Sobic003G092150--Sobic005G110553 Sobic004G224000--Sobic003G149400 Sobic004G224000--Sobic008G065700 Sobic004G224000--Sobic009G122000 Sobic004G224000--Sobic001G424650 Sobic004G224000--Sobic005G110553 Sobic010G249600 Sobic010G249600 Sobic004G224000--Sobic010G249600 Sobic001G492400 Sobic001G492400 Sobic004G224000--Sobic001G492400 Sobic004G224000--Sobic001G503700 Sobic006G118150 Sobic006G118150 Sobic004G224000--Sobic006G118150 Sobic004G000500--Sobic003G331200 Sobic004G000500--Sobic001G367900 Sobic004G000500--Sobic007G210200 Sobic004G000500--Sobic007G010400 Sobic002G347750 Sobic002G347750 Sobic004G000500--Sobic002G347750 Sobic004G000500--Sobic003G149400 Sobic005G205100 Sobic005G205100 Sobic004G000500--Sobic005G205100 Sobic008G153300 Sobic008G153300 Sobic004G000500--Sobic008G153300 Sobic004G000500--Sobic009G122000 Sobic003G331200--Sobic004G000500 Sobic003G331200--Sobic001G367900 Sobic003G331200--Sobic008G119100 Sobic003G331200--Sobic007G210200 Sobic003G331200--Sobic003G092150 Sobic009G193600 Sobic009G193600 Sobic003G331200--Sobic009G193600 Sobic003G331200--Sobic002G347750 Sobic003G331200--Sobic008G065700 Sobic003G331200--Sobic007G226000
Octagon: transcription factors


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