Gene annotation
Transcriptome id Sobic.002G037700.1
Synonym Sb02g003260
Functional annotation expressed protein
UniProt C5X9M1
Pfam PF14631
Panther DB PTHR32086
NCBI CDD KOG4712; Uncharacterized conserved protein
KEGG Orthology K10891; fanconi anemia group D2 protein
Gene Ontology GO:0006281; DNA repair


Orthologs (automatic annotation)
TAIR AT4G14970 : -
RAP-DB (Rice) LOC_Os07g05960.1 : expressed protein
MaizeGDB (Corn) Zm00025a016158
Brachypodium PNT77069
Barley HORVU2Hr1G059140.39 , HORVU2Hr1G059140.35 , HORVU2Hr1G059140.34 , HORVU2Hr1G059140.36 , HORVU2Hr1G059140.31 , HORVU2Hr1G059140.33 , HORVU2Hr1G059140.9 , HORVU2Hr1G059140.8 , HORVU2Hr1G059140.3 , HORVU2Hr1G059140.2 , HORVU2Hr1G059140.1 , HORVU2Hr1G059140.4 , HORVU2Hr1G059140.23 , HORVU2Hr1G059140.20 , HORVU2Hr1G059140.26 , HORVU2Hr1G059140.27 , HORVU2Hr1G059140.24 , HORVU2Hr1G059140.28 , HORVU2Hr1G059140.57 , HORVU2Hr1G059140.56 , HORVU2Hr1G059140.55 , HORVU2Hr1G059140.54 , HORVU2Hr1G059140.53 , HORVU2Hr1G059140.50 , HORVU2Hr1G059140.59 , HORVU2Hr1G059140.58 , HORVU2Hr1G059140.44 , HORVU2Hr1G059140.47 , HORVU2Hr1G059140.40 , HORVU2Hr1G059140.41 , HORVU2Hr1G059140.42 , HORVU2Hr1G059140.48 , HORVU2Hr1G059140.49 , HORVU2Hr1G059140.19 , HORVU2Hr1G059140.18 , HORVU2Hr1G059140.13 , HORVU2Hr1G059140.12 , HORVU2Hr1G059140.11 , HORVU2Hr1G059140.10 , HORVU2Hr1G059140.17 , HORVU2Hr1G059140.16 , HORVU2Hr1G059140.15 , HORVU2Hr1G059140.62 , HORVU2Hr1G059140.60 , HORVU2Hr1G059140.61
Wheat TraesCS2D02G251400 , TraesCS2D02G251400 , TraesCS2A02G250200 , TraesCS2A02G250200 , TraesCS2A02G250200 , TraesCS2B02G266400 , TraesCS2B02G266400 , TraesCS2A02G250200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G234300 - -
2 Sobic.008G016800 zinc finger DHHC domain-containing protein, putative, expressed -
3 Sobic.004G007200 - -
4 Sobic.005G110553 - -
5 Sobic.010G242000 phytosulfokine receptor precursor, putative, expressed -
6 Sobic.008G159800 - -
7 Sobic.002G197400 expressed protein -
8 Sobic.007G226000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
9 Sobic.001G367900 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@annexin, putative, expressed -
10 Sobic.010G249600 macrophage migration inhibitory factor, putative, expressed -
11 Sobic.004G091300 receptor-like protein kinase precursor, putative, expressed -
12 Sobic.007G210200 Highest expression level in seeds(PubMedID : 27501690)@OsSPL14 - SBP-box gene family member, expressed -
13 Sobic.002G110600 regulatory protein, putative, expressed -
14 Sobic.002G377400 cysteine-rich receptor-like protein kinase 16 precursor, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
15 Sobic.007G175600 "domain confirmed by Pfam database, expression supported by NCBI EST database"(PubMedID : 20499123)@OsSAUR36 - Auxin-responsive SAUR gene family member, expressed -
16 Sobic.002G399000 expressed protein -
17 Sobic.002G234800 expressed protein -
18 Sobic.001G191300 bile acid sodium symporter family protein, putative, expressed K03453: bile acid:Na+ symporter, BASS family
19 Sobic.006G024400 receptor-like protein kinase, putative, expressed -
20 Sobic.009G183650 - -


Gene co-expression network
sample Sobic002G037700 Sobic002G037700 Sobic003G234300 Sobic003G234300 Sobic002G037700--Sobic003G234300 Sobic008G016800 Sobic008G016800 Sobic002G037700--Sobic008G016800 Sobic004G007200 Sobic004G007200 Sobic002G037700--Sobic004G007200 Sobic005G110553 Sobic005G110553 Sobic002G037700--Sobic005G110553 Sobic010G242000 Sobic010G242000 Sobic002G037700--Sobic010G242000 Sobic008G159800 Sobic008G159800 Sobic002G037700--Sobic008G159800 Sobic002G197400 Sobic002G197400 Sobic002G037700--Sobic002G197400 Sobic007G226000 Sobic007G226000 Sobic002G037700--Sobic007G226000 Sobic001G367900 Sobic001G367900 Sobic002G037700--Sobic001G367900 Sobic007G175600 Sobic007G175600 Sobic003G234300--Sobic007G175600 Sobic003G234300--Sobic002G037700 Sobic003G234300--Sobic004G007200 Sobic006G111400 Sobic006G111400 Sobic003G234300--Sobic006G111400 Sobic002G234800 Sobic002G234800 Sobic003G234300--Sobic002G234800 Sobic006G103800 Sobic006G103800 Sobic003G234300--Sobic006G103800 Sobic003G234300--Sobic010G242000 Sobic010G201444 Sobic010G201444 Sobic003G234300--Sobic010G201444 Sobic004G221100 Sobic004G221100 Sobic003G234300--Sobic004G221100 Sobic002G110600 Sobic002G110600 Sobic008G016800--Sobic002G110600 Sobic001G109400 Sobic001G109400 Sobic008G016800--Sobic001G109400 Sobic008G103400 Sobic008G103400 Sobic008G016800--Sobic008G103400 Sobic002G398600 Sobic002G398600 Sobic008G016800--Sobic002G398600 Sobic001G212900 Sobic001G212900 Sobic008G016800--Sobic001G212900 Sobic006G249600 Sobic006G249600 Sobic008G016800--Sobic006G249600 Sobic003G362800 Sobic003G362800 Sobic008G016800--Sobic003G362800 Sobic001G383200 Sobic001G383200 Sobic008G016800--Sobic001G383200 Sobic001G191300 Sobic001G191300 Sobic008G016800--Sobic001G191300 Sobic006G024400 Sobic006G024400 Sobic004G007200--Sobic006G024400 Sobic004G007200--Sobic003G234300 Sobic009G079700 Sobic009G079700 Sobic004G007200--Sobic009G079700 Sobic004G007200--Sobic002G037700 Sobic010G210400 Sobic010G210400 Sobic004G007200--Sobic010G210400 Sobic002G215600 Sobic002G215600 Sobic004G007200--Sobic002G215600 Sobic004G007200--Sobic006G111400 Sobic004G007200--Sobic001G367900 Sobic004G007200--Sobic008G159800 Sobic009G122000 Sobic009G122000 Sobic005G110553--Sobic009G122000 Sobic001G424650 Sobic001G424650 Sobic005G110553--Sobic001G424650 Sobic003G149400 Sobic003G149400 Sobic005G110553--Sobic003G149400 Sobic006G268100 Sobic006G268100 Sobic005G110553--Sobic006G268100 Sobic008G065700 Sobic008G065700 Sobic005G110553--Sobic008G065700 Sobic004G224000 Sobic004G224000 Sobic005G110553--Sobic004G224000 Sobic001G334400 Sobic001G334400 Sobic005G110553--Sobic001G334400 Sobic009G183650 Sobic009G183650 Sobic005G110553--Sobic009G183650 Sobic007G210200 Sobic007G210200 Sobic005G110553--Sobic007G210200 Sobic005G025400 Sobic005G025400 Sobic010G242000--Sobic005G025400 Sobic006G170800 Sobic006G170800 Sobic010G242000--Sobic006G170800 Sobic010G242000--Sobic008G159800 Sobic007G114650 Sobic007G114650 Sobic010G242000--Sobic007G114650 Sobic002G399000 Sobic002G399000 Sobic010G242000--Sobic002G399000 Sobic003G440500 Sobic003G440500 Sobic010G242000--Sobic003G440500 Sobic001G350300 Sobic001G350300 Sobic010G242000--Sobic001G350300 Sobic008G134500 Sobic008G134500 Sobic010G242000--Sobic008G134500 Sobic002G320700 Sobic002G320700 Sobic010G242000--Sobic002G320700 Sobic008G159800--Sobic010G242000 Sobic008G159800--Sobic005G025400 Sobic008G159800--Sobic003G440500 Sobic005G090700 Sobic005G090700 Sobic008G159800--Sobic005G090700 Sobic007G185000 Sobic007G185000 Sobic008G159800--Sobic007G185000 Sobic005G014400 Sobic005G014400 Sobic008G159800--Sobic005G014400 Sobic003G308900 Sobic003G308900 Sobic008G159800--Sobic003G308900 Sobic002G377400 Sobic002G377400 Sobic008G159800--Sobic002G377400 Sobic003G336600 Sobic003G336600 Sobic008G159800--Sobic003G336600 Sobic004G091300 Sobic004G091300 Sobic002G197400--Sobic004G091300 Sobic008G160100 Sobic008G160100 Sobic002G197400--Sobic008G160100 Sobic002G197400--Sobic002G110600 Sobic002G197400--Sobic008G016800 Sobic004G310400 Sobic004G310400 Sobic002G197400--Sobic004G310400 Sobic001G096200 Sobic001G096200 Sobic002G197400--Sobic001G096200 Sobic004G026000 Sobic004G026000 Sobic002G197400--Sobic004G026000 Sobic002G197400--Sobic002G399000 Sobic003G118500 Sobic003G118500 Sobic002G197400--Sobic003G118500 Sobic007G226000--Sobic008G065700 Sobic007G226000--Sobic007G185000 Sobic010G249600 Sobic010G249600 Sobic007G226000--Sobic010G249600 Sobic007G226000--Sobic004G224000 Sobic007G226000--Sobic003G149400 Sobic007G226000--Sobic001G367900 Sobic009G240300 Sobic009G240300 Sobic007G226000--Sobic009G240300 Sobic007G226000--Sobic003G440500 Sobic003G092150 Sobic003G092150 Sobic007G226000--Sobic003G092150 Sobic007G010400 Sobic007G010400 Sobic001G367900--Sobic007G010400 Sobic001G367900--Sobic003G149400 Sobic001G367900--Sobic008G065700 Sobic001G367900--Sobic007G210200 Sobic003G331200 Sobic003G331200 Sobic001G367900--Sobic003G331200 Sobic004G000500 Sobic004G000500 Sobic001G367900--Sobic004G000500 Sobic001G367900--Sobic007G226000 Sobic001G367900--Sobic003G092150 Sobic001G367900--Sobic009G122000
Octagon: transcription factors


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