Gene annotation
Transcriptome id Sobic.004G007200.1
Synonym
Functional annotation -
UniProt A0A194YM27
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G024400 receptor-like protein kinase, putative, expressed -
2 Sobic.003G234300 - -
3 Sobic.009G079700 C2 domain containing protein, putative, expressed -
4 Sobic.002G037700 expressed protein K10891: fanconi anemia group D2 protein
5 Sobic.010G210400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@- -
6 Sobic.002G215600 BRCA1 C Terminus domain containing protein, expressed -
7 Sobic.006G111400 nodulation receptor kinase precursor, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
8 Sobic.001G367900 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@annexin, putative, expressed -
9 Sobic.008G159800 - -
10 Sobic.002G280001 - -
11 Sobic.010G242000 phytosulfokine receptor precursor, putative, expressed -
12 Sobic.002G274000 OsSub59 - Putative Subtilisin homologue, expressed -
13 Sobic.010G201444 - -
14 Sobic.007G200300 lectin protein kinase family protein, putative, expressed -
15 Sobic.008G153300 RING-H2 finger protein ATL3J, putative, expressed K10663: E3 ubiquitin-protein ligase ATL4
16 Sobic.004G273550 - -
17 Sobic.002G227100 cyclin-dependent kinase inhibitor, putative, expressed -
18 Sobic.006G103800 AGC_PVPK_like_CDK8.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
19 Sobic.007G175600 "domain confirmed by Pfam database, expression supported by NCBI EST database"(PubMedID : 20499123)@OsSAUR36 - Auxin-responsive SAUR gene family member, expressed -
20 Sobic.008G065700 RNA recognition motif containing protein, expressed -


Gene co-expression network
sample Sobic004G007200 Sobic004G007200 Sobic006G024400 Sobic006G024400 Sobic004G007200--Sobic006G024400 Sobic003G234300 Sobic003G234300 Sobic004G007200--Sobic003G234300 Sobic009G079700 Sobic009G079700 Sobic004G007200--Sobic009G079700 Sobic002G037700 Sobic002G037700 Sobic004G007200--Sobic002G037700 Sobic010G210400 Sobic010G210400 Sobic004G007200--Sobic010G210400 Sobic002G215600 Sobic002G215600 Sobic004G007200--Sobic002G215600 Sobic006G111400 Sobic006G111400 Sobic004G007200--Sobic006G111400 Sobic001G367900 Sobic001G367900 Sobic004G007200--Sobic001G367900 Sobic008G159800 Sobic008G159800 Sobic004G007200--Sobic008G159800 Sobic006G024400--Sobic004G007200 Sobic003G001650 Sobic003G001650 Sobic006G024400--Sobic003G001650 Sobic003G276400 Sobic003G276400 Sobic006G024400--Sobic003G276400 Sobic005G014400 Sobic005G014400 Sobic006G024400--Sobic005G014400 Sobic003G251900 Sobic003G251900 Sobic006G024400--Sobic003G251900 Sobic001G104100 Sobic001G104100 Sobic006G024400--Sobic001G104100 Sobic010G201444 Sobic010G201444 Sobic006G024400--Sobic010G201444 Sobic001G113400 Sobic001G113400 Sobic006G024400--Sobic001G113400 Sobic009G199900 Sobic009G199900 Sobic006G024400--Sobic009G199900 Sobic007G175600 Sobic007G175600 Sobic003G234300--Sobic007G175600 Sobic003G234300--Sobic002G037700 Sobic003G234300--Sobic004G007200 Sobic003G234300--Sobic006G111400 Sobic002G234800 Sobic002G234800 Sobic003G234300--Sobic002G234800 Sobic006G103800 Sobic006G103800 Sobic003G234300--Sobic006G103800 Sobic010G242000 Sobic010G242000 Sobic003G234300--Sobic010G242000 Sobic003G234300--Sobic010G201444 Sobic004G221100 Sobic004G221100 Sobic003G234300--Sobic004G221100 Sobic009G079700--Sobic010G210400 Sobic005G110553 Sobic005G110553 Sobic009G079700--Sobic005G110553 Sobic001G334400 Sobic001G334400 Sobic009G079700--Sobic001G334400 Sobic006G268100 Sobic006G268100 Sobic009G079700--Sobic006G268100 Sobic002G274000 Sobic002G274000 Sobic009G079700--Sobic002G274000 Sobic009G079700--Sobic004G007200 Sobic009G183650 Sobic009G183650 Sobic009G079700--Sobic009G183650 Sobic004G343733 Sobic004G343733 Sobic009G079700--Sobic004G343733 Sobic008G153300 Sobic008G153300 Sobic009G079700--Sobic008G153300 Sobic002G037700--Sobic003G234300 Sobic008G016800 Sobic008G016800 Sobic002G037700--Sobic008G016800 Sobic002G037700--Sobic004G007200 Sobic002G037700--Sobic005G110553 Sobic002G037700--Sobic010G242000 Sobic002G037700--Sobic008G159800 Sobic002G197400 Sobic002G197400 Sobic002G037700--Sobic002G197400 Sobic007G226000 Sobic007G226000 Sobic002G037700--Sobic007G226000 Sobic002G037700--Sobic001G367900 Sobic010G210400--Sobic009G079700 Sobic001G070900 Sobic001G070900 Sobic010G210400--Sobic001G070900 Sobic004G272000 Sobic004G272000 Sobic010G210400--Sobic004G272000 Sobic004G089801 Sobic004G089801 Sobic010G210400--Sobic004G089801 Sobic010G210400--Sobic004G007200 Sobic002G365300 Sobic002G365300 Sobic010G210400--Sobic002G365300 Sobic010G210400--Sobic004G343733 Sobic010G187950 Sobic010G187950 Sobic010G210400--Sobic010G187950 Sobic010G210400--Sobic002G215600 Sobic006G049000 Sobic006G049000 Sobic002G215600--Sobic006G049000 Sobic002G215600--Sobic008G153300 Sobic003G059500 Sobic003G059500 Sobic002G215600--Sobic003G059500 Sobic004G167500 Sobic004G167500 Sobic002G215600--Sobic004G167500 Sobic004G045000 Sobic004G045000 Sobic002G215600--Sobic004G045000 Sobic003G356500 Sobic003G356500 Sobic002G215600--Sobic003G356500 Sobic003G438100 Sobic003G438100 Sobic002G215600--Sobic003G438100 Sobic001G468900 Sobic001G468900 Sobic002G215600--Sobic001G468900 Sobic002G215600--Sobic001G367900 Sobic008G007100 Sobic008G007100 Sobic006G111400--Sobic008G007100 Sobic006G111400--Sobic002G234800 Sobic006G169600 Sobic006G169600 Sobic006G111400--Sobic006G169600 Sobic006G111400--Sobic009G199900 Sobic006G111400--Sobic003G251900 Sobic007G200300 Sobic007G200300 Sobic006G111400--Sobic007G200300 Sobic006G111400--Sobic003G234300 Sobic004G350600 Sobic004G350600 Sobic006G111400--Sobic004G350600 Sobic004G149000 Sobic004G149000 Sobic006G111400--Sobic004G149000 Sobic007G010400 Sobic007G010400 Sobic001G367900--Sobic007G010400 Sobic003G149400 Sobic003G149400 Sobic001G367900--Sobic003G149400 Sobic008G065700 Sobic008G065700 Sobic001G367900--Sobic008G065700 Sobic007G210200 Sobic007G210200 Sobic001G367900--Sobic007G210200 Sobic003G331200 Sobic003G331200 Sobic001G367900--Sobic003G331200 Sobic004G000500 Sobic004G000500 Sobic001G367900--Sobic004G000500 Sobic001G367900--Sobic007G226000 Sobic003G092150 Sobic003G092150 Sobic001G367900--Sobic003G092150 Sobic009G122000 Sobic009G122000 Sobic001G367900--Sobic009G122000 Sobic008G159800--Sobic010G242000 Sobic005G025400 Sobic005G025400 Sobic008G159800--Sobic005G025400 Sobic003G440500 Sobic003G440500 Sobic008G159800--Sobic003G440500 Sobic005G090700 Sobic005G090700 Sobic008G159800--Sobic005G090700 Sobic007G185000 Sobic007G185000 Sobic008G159800--Sobic007G185000 Sobic008G159800--Sobic005G014400 Sobic003G308900 Sobic003G308900 Sobic008G159800--Sobic003G308900 Sobic002G377400 Sobic002G377400 Sobic008G159800--Sobic002G377400 Sobic003G336600 Sobic003G336600 Sobic008G159800--Sobic003G336600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.