Gene annotation
Transcriptome id Sobic.006G103800.1
Synonym
Functional annotation AGC_PVPK_like_CDK8.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed
UniProt A0A1B6PLB0
Pfam -
Panther DB PTHR24351 PTHR24351:SF109
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os09g31210.1 : AGC_PVPK_like_CDK8.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G201444 - -
2 Sobic.005G083400 expressed protein -
3 Sobic.007G175600 "domain confirmed by Pfam database, expression supported by NCBI EST database"(PubMedID : 20499123)@OsSAUR36 - Auxin-responsive SAUR gene family member, expressed -
4 Sobic.003G251900 expressed protein -
5 Sobic.003G234300 - -
6 Sobic.004G221100 uncharacterized protein PA4923, putative, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
7 Sobic.006G027800 disease resistance RPP13-like protein 1, putative, expressed -
8 Sobic.006G111400 nodulation receptor kinase precursor, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
9 Sobic.001G093732 - -
10 Sobic.008G007200 lectin-like receptor kinase, putative, expressed -
11 Sobic.005G014400 esterase, putative, expressed -
12 Sobic.008G007100 lectin-like receptor kinase 7, putative, expressed -
13 Sobic.002G234800 expressed protein -
14 Sobic.004G007200 - -
15 Sobic.001G316500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
16 Sobic.006G154900 mitochondrial carrier protein, putative, expressed -
17 Sobic.009G252600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial chaperone BCS1, putative, expressed K08900: mitochondrial chaperone BCS1
18 Sobic.001G506066 - -
19 Sobic.007G155950 - -
20 Sobic.004G345200 OsWAK11 - OsWAK receptor-like protein kinase, expressed -


Gene co-expression network
sample Sobic006G103800 Sobic006G103800 Sobic010G201444 Sobic010G201444 Sobic006G103800--Sobic010G201444 Sobic005G083400 Sobic005G083400 Sobic006G103800--Sobic005G083400 Sobic007G175600 Sobic007G175600 Sobic006G103800--Sobic007G175600 Sobic003G251900 Sobic003G251900 Sobic006G103800--Sobic003G251900 Sobic003G234300 Sobic003G234300 Sobic006G103800--Sobic003G234300 Sobic004G221100 Sobic004G221100 Sobic006G103800--Sobic004G221100 Sobic006G027800 Sobic006G027800 Sobic006G103800--Sobic006G027800 Sobic006G111400 Sobic006G111400 Sobic006G103800--Sobic006G111400 Sobic001G093732 Sobic001G093732 Sobic006G103800--Sobic001G093732 Sobic010G201444--Sobic001G093732 Sobic010G201444--Sobic006G103800 Sobic010G201444--Sobic003G251900 Sobic008G007200 Sobic008G007200 Sobic010G201444--Sobic008G007200 Sobic009G252600 Sobic009G252600 Sobic010G201444--Sobic009G252600 Sobic005G014400 Sobic005G014400 Sobic010G201444--Sobic005G014400 Sobic006G024400 Sobic006G024400 Sobic010G201444--Sobic006G024400 Sobic004G181000 Sobic004G181000 Sobic010G201444--Sobic004G181000 Sobic006G154900 Sobic006G154900 Sobic010G201444--Sobic006G154900 Sobic005G083400--Sobic006G103800 Sobic008G064200 Sobic008G064200 Sobic005G083400--Sobic008G064200 Sobic005G083400--Sobic006G027800 Sobic005G083400--Sobic010G201444 Sobic006G075200 Sobic006G075200 Sobic005G083400--Sobic006G075200 Sobic005G083400--Sobic007G175600 Sobic009G218450 Sobic009G218450 Sobic005G083400--Sobic009G218450 Sobic004G203633 Sobic004G203633 Sobic005G083400--Sobic004G203633 Sobic002G365300 Sobic002G365300 Sobic005G083400--Sobic002G365300 Sobic007G175600--Sobic003G234300 Sobic007G175600--Sobic006G103800 Sobic007G175600--Sobic010G201444 Sobic007G175600--Sobic006G111400 Sobic002G234800 Sobic002G234800 Sobic007G175600--Sobic002G234800 Sobic002G037700 Sobic002G037700 Sobic007G175600--Sobic002G037700 Sobic007G175600--Sobic004G221100 Sobic008G007100 Sobic008G007100 Sobic007G175600--Sobic008G007100 Sobic007G175600--Sobic005G083400 Sobic003G251900--Sobic009G252600 Sobic003G251900--Sobic004G181000 Sobic003G155800 Sobic003G155800 Sobic003G251900--Sobic003G155800 Sobic003G251900--Sobic005G014400 Sobic003G251900--Sobic010G201444 Sobic003G251900--Sobic001G093732 Sobic002G206900 Sobic002G206900 Sobic003G251900--Sobic002G206900 Sobic009G199900 Sobic009G199900 Sobic003G251900--Sobic009G199900 Sobic003G362800 Sobic003G362800 Sobic003G251900--Sobic003G362800 Sobic003G234300--Sobic007G175600 Sobic003G234300--Sobic002G037700 Sobic004G007200 Sobic004G007200 Sobic003G234300--Sobic004G007200 Sobic003G234300--Sobic006G111400 Sobic003G234300--Sobic002G234800 Sobic003G234300--Sobic006G103800 Sobic010G242000 Sobic010G242000 Sobic003G234300--Sobic010G242000 Sobic003G234300--Sobic010G201444 Sobic003G234300--Sobic004G221100 Sobic004G074400 Sobic004G074400 Sobic004G221100--Sobic004G074400 Sobic002G208700 Sobic002G208700 Sobic004G221100--Sobic002G208700 Sobic004G221100--Sobic010G201444 Sobic004G091300 Sobic004G091300 Sobic004G221100--Sobic004G091300 Sobic010G042300 Sobic010G042300 Sobic004G221100--Sobic010G042300 Sobic006G280250 Sobic006G280250 Sobic004G221100--Sobic006G280250 Sobic007G075600 Sobic007G075600 Sobic004G221100--Sobic007G075600 Sobic004G221100--Sobic006G103800 Sobic009G180900 Sobic009G180900 Sobic004G221100--Sobic009G180900 Sobic006G027800--Sobic009G180900 Sobic006G027800--Sobic009G218450 Sobic010G175100 Sobic010G175100 Sobic006G027800--Sobic010G175100 Sobic006G027800--Sobic008G064200 Sobic006G027800--Sobic005G083400 Sobic006G027800--Sobic010G201444 Sobic001G005100 Sobic001G005100 Sobic006G027800--Sobic001G005100 Sobic007G174000 Sobic007G174000 Sobic006G027800--Sobic007G174000 Sobic006G027800--Sobic004G221100 Sobic006G111400--Sobic008G007100 Sobic006G111400--Sobic002G234800 Sobic006G169600 Sobic006G169600 Sobic006G111400--Sobic006G169600 Sobic006G111400--Sobic009G199900 Sobic006G111400--Sobic003G251900 Sobic007G200300 Sobic007G200300 Sobic006G111400--Sobic007G200300 Sobic006G111400--Sobic003G234300 Sobic004G350600 Sobic004G350600 Sobic006G111400--Sobic004G350600 Sobic004G149000 Sobic004G149000 Sobic006G111400--Sobic004G149000 Sobic001G093732--Sobic009G252600 Sobic001G093732--Sobic010G201444 Sobic001G093732--Sobic003G251900 Sobic001G093732--Sobic005G014400 Sobic001G093732--Sobic008G007200 Sobic001G483001 Sobic001G483001 Sobic001G093732--Sobic001G483001 Sobic007G046600 Sobic007G046600 Sobic001G093732--Sobic007G046600 Sobic001G093732--Sobic006G154900 Sobic006G279100 Sobic006G279100 Sobic001G093732--Sobic006G279100
Octagon: transcription factors


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