Gene annotation
Transcriptome id Sobic.006G111400.3,Sobic.006G111400.2
Synonym Sb06g019350
Functional annotation nodulation receptor kinase precursor, putative, expressed
UniProt A0A1Z5REB8 , A0A1Z5RDF1
Pfam PF00069
Panther DB PTHR27003 PTHR27003:SF3
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology K04730; interleukin-1 receptor-associated kinase 1
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G18500 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os04g39180.1 : nodulation receptor kinase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a011080
Brachypodium PNT61249
Barley -
Wheat TraesCS2A02G334300 , TraesCS2B02G347500 , TraesCS2D02G328500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G007100 lectin-like receptor kinase 7, putative, expressed -
2 Sobic.002G234800 expressed protein -
3 Sobic.006G169600 expressed protein -
4 Sobic.009G199900 osFTL10 FT-Like10 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
5 Sobic.003G251900 expressed protein -
6 Sobic.007G200300 lectin protein kinase family protein, putative, expressed -
7 Sobic.003G234300 - -
8 Sobic.004G350600 AMP-binding domain containing protein, expressed -
9 Sobic.004G149000 - -
10 Sobic.010G201444 - -
11 Sobic.004G181000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.007G175600 "domain confirmed by Pfam database, expression supported by NCBI EST database"(PubMedID : 20499123)@OsSAUR36 - Auxin-responsive SAUR gene family member, expressed -
13 Sobic.003G005332 - -
14 Sobic.004G228000 DUF1771 domain containing protein, putative, expressed -
15 Sobic.006G270300 Mlo family(PubMedID : 29491869)@MLO domain containing protein, putative, expressed K08472: mlo protein
16 Sobic.001G104100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ACT domain containing protein, expressed -
17 Sobic.001G350300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
18 Sobic.001G140101 - -
19 Sobic.002G399000 expressed protein -
20 Sobic.003G155800 dnaJ homolog subfamily B member 11 precursor, putative, expressed K09517: DnaJ homolog subfamily B member 11


Gene co-expression network
sample Sobic006G111400 Sobic006G111400 Sobic008G007100 Sobic008G007100 Sobic006G111400--Sobic008G007100 Sobic002G234800 Sobic002G234800 Sobic006G111400--Sobic002G234800 Sobic006G169600 Sobic006G169600 Sobic006G111400--Sobic006G169600 Sobic009G199900 Sobic009G199900 Sobic006G111400--Sobic009G199900 Sobic003G251900 Sobic003G251900 Sobic006G111400--Sobic003G251900 Sobic007G200300 Sobic007G200300 Sobic006G111400--Sobic007G200300 Sobic003G234300 Sobic003G234300 Sobic006G111400--Sobic003G234300 Sobic004G350600 Sobic004G350600 Sobic006G111400--Sobic004G350600 Sobic004G149000 Sobic004G149000 Sobic006G111400--Sobic004G149000 Sobic008G007200 Sobic008G007200 Sobic008G007100--Sobic008G007200 Sobic008G007100--Sobic006G111400 Sobic003G005332 Sobic003G005332 Sobic008G007100--Sobic003G005332 Sobic001G027400 Sobic001G027400 Sobic008G007100--Sobic001G027400 Sobic003G304900 Sobic003G304900 Sobic008G007100--Sobic003G304900 Sobic008G007100--Sobic009G199900 Sobic003G259000 Sobic003G259000 Sobic008G007100--Sobic003G259000 Sobic008G007100--Sobic003G251900 Sobic008G007100--Sobic006G169600 Sobic004G181000 Sobic004G181000 Sobic002G234800--Sobic004G181000 Sobic002G234800--Sobic006G111400 Sobic009G223900 Sobic009G223900 Sobic002G234800--Sobic009G223900 Sobic008G103400 Sobic008G103400 Sobic002G234800--Sobic008G103400 Sobic002G234800--Sobic003G251900 Sobic002G110600 Sobic002G110600 Sobic002G234800--Sobic002G110600 Sobic002G001500 Sobic002G001500 Sobic002G234800--Sobic002G001500 Sobic002G234800--Sobic006G169600 Sobic003G155800 Sobic003G155800 Sobic002G234800--Sobic003G155800 Sobic005G063600 Sobic005G063600 Sobic006G169600--Sobic005G063600 Sobic009G160100 Sobic009G160100 Sobic006G169600--Sobic009G160100 Sobic006G169600--Sobic006G111400 Sobic006G169600--Sobic003G155800 Sobic006G169600--Sobic004G350600 Sobic006G169600--Sobic009G199900 Sobic006G169600--Sobic004G181000 Sobic006G169600--Sobic002G234800 Sobic003G150700 Sobic003G150700 Sobic006G169600--Sobic003G150700 Sobic001G104100 Sobic001G104100 Sobic009G199900--Sobic001G104100 Sobic001G028500 Sobic001G028500 Sobic009G199900--Sobic001G028500 Sobic003G106100 Sobic003G106100 Sobic009G199900--Sobic003G106100 Sobic004G202750 Sobic004G202750 Sobic009G199900--Sobic004G202750 Sobic009G199900--Sobic004G350600 Sobic004G231501 Sobic004G231501 Sobic009G199900--Sobic004G231501 Sobic004G026000 Sobic004G026000 Sobic009G199900--Sobic004G026000 Sobic009G199900--Sobic003G155800 Sobic004G314100 Sobic004G314100 Sobic009G199900--Sobic004G314100 Sobic009G252600 Sobic009G252600 Sobic003G251900--Sobic009G252600 Sobic003G251900--Sobic004G181000 Sobic003G251900--Sobic003G155800 Sobic005G014400 Sobic005G014400 Sobic003G251900--Sobic005G014400 Sobic010G201444 Sobic010G201444 Sobic003G251900--Sobic010G201444 Sobic001G093732 Sobic001G093732 Sobic003G251900--Sobic001G093732 Sobic002G206900 Sobic002G206900 Sobic003G251900--Sobic002G206900 Sobic003G251900--Sobic009G199900 Sobic003G362800 Sobic003G362800 Sobic003G251900--Sobic003G362800 Sobic007G200300--Sobic004G149000 Sobic002G280001 Sobic002G280001 Sobic007G200300--Sobic002G280001 Sobic006G270300 Sobic006G270300 Sobic007G200300--Sobic006G270300 Sobic002G227100 Sobic002G227100 Sobic007G200300--Sobic002G227100 Sobic002G320700 Sobic002G320700 Sobic007G200300--Sobic002G320700 Sobic004G081000 Sobic004G081000 Sobic007G200300--Sobic004G081000 Sobic007G200300--Sobic009G199900 Sobic007G200300--Sobic006G111400 Sobic004G203600 Sobic004G203600 Sobic007G200300--Sobic004G203600 Sobic007G175600 Sobic007G175600 Sobic003G234300--Sobic007G175600 Sobic002G037700 Sobic002G037700 Sobic003G234300--Sobic002G037700 Sobic004G007200 Sobic004G007200 Sobic003G234300--Sobic004G007200 Sobic003G234300--Sobic006G111400 Sobic003G234300--Sobic002G234800 Sobic006G103800 Sobic006G103800 Sobic003G234300--Sobic006G103800 Sobic010G242000 Sobic010G242000 Sobic003G234300--Sobic010G242000 Sobic003G234300--Sobic010G201444 Sobic004G221100 Sobic004G221100 Sobic003G234300--Sobic004G221100 Sobic001G350300 Sobic001G350300 Sobic004G350600--Sobic001G350300 Sobic002G399000 Sobic002G399000 Sobic004G350600--Sobic002G399000 Sobic004G350600--Sobic001G104100 Sobic004G350600--Sobic001G028500 Sobic006G170800 Sobic006G170800 Sobic004G350600--Sobic006G170800 Sobic004G350600--Sobic009G199900 Sobic004G305300 Sobic004G305300 Sobic004G350600--Sobic004G305300 Sobic004G350600--Sobic002G320700 Sobic003G118500 Sobic003G118500 Sobic004G350600--Sobic003G118500 Sobic004G149000--Sobic007G200300 Sobic004G149000--Sobic004G081000 Sobic009G147600 Sobic009G147600 Sobic004G149000--Sobic009G147600 Sobic004G149000--Sobic002G227100 Sobic004G149000--Sobic002G280001 Sobic004G149000--Sobic002G320700 Sobic004G149000--Sobic006G270300 Sobic003G079600 Sobic003G079600 Sobic004G149000--Sobic003G079600 Sobic004G149000--Sobic006G169600
Octagon: transcription factors


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