Gene annotation
Transcriptome id Sobic.004G149000.1
Synonym
Functional annotation -
UniProt A0A194YPV9
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G200300 lectin protein kinase family protein, putative, expressed -
2 Sobic.004G081000 - -
3 Sobic.009G147600 pentatricopeptide, putative, expressed -
4 Sobic.002G227100 cyclin-dependent kinase inhibitor, putative, expressed -
5 Sobic.002G280001 - -
6 Sobic.002G320700 expressed protein -
7 Sobic.006G270300 Mlo family(PubMedID : 29491869)@MLO domain containing protein, putative, expressed K08472: mlo protein
8 Sobic.003G079600 expressed protein -
9 Sobic.006G169600 expressed protein -
10 Sobic.009G199900 osFTL10 FT-Like10 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
11 Sobic.003G150700 pectinacetylesterase domain containing protein, expressed -
12 Sobic.006G170800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lactate/malate dehydrogenase, putative, expressed K00025: malate dehydrogenase
13 Sobic.006G111400 nodulation receptor kinase precursor, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
14 Sobic.004G202750 - -
15 Sobic.010G242000 phytosulfokine receptor precursor, putative, expressed -
16 Sobic.004G203600 Regulator of chromosome condensation domain containing protein, expressed -
17 Sobic.001G104100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ACT domain containing protein, expressed -
18 Sobic.001G361750 - -
19 Sobic.001G033200 GRAS family transcription factor domain containing protein, expressed -
20 Sobic.009G208000 high level expression during drought stress(PubMedID : 27006630)@RHsf 10/Hsf sp 17(PubMedID : 27006630)@expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote


Gene co-expression network
sample Sobic004G149000 Sobic004G149000 Sobic007G200300 Sobic007G200300 Sobic004G149000--Sobic007G200300 Sobic004G081000 Sobic004G081000 Sobic004G149000--Sobic004G081000 Sobic009G147600 Sobic009G147600 Sobic004G149000--Sobic009G147600 Sobic002G227100 Sobic002G227100 Sobic004G149000--Sobic002G227100 Sobic002G280001 Sobic002G280001 Sobic004G149000--Sobic002G280001 Sobic002G320700 Sobic002G320700 Sobic004G149000--Sobic002G320700 Sobic006G270300 Sobic006G270300 Sobic004G149000--Sobic006G270300 Sobic003G079600 Sobic003G079600 Sobic004G149000--Sobic003G079600 Sobic006G169600 Sobic006G169600 Sobic004G149000--Sobic006G169600 Sobic007G200300--Sobic004G149000 Sobic007G200300--Sobic002G280001 Sobic007G200300--Sobic006G270300 Sobic007G200300--Sobic002G227100 Sobic007G200300--Sobic002G320700 Sobic007G200300--Sobic004G081000 Sobic009G199900 Sobic009G199900 Sobic007G200300--Sobic009G199900 Sobic006G111400 Sobic006G111400 Sobic007G200300--Sobic006G111400 Sobic004G203600 Sobic004G203600 Sobic007G200300--Sobic004G203600 Sobic004G081000--Sobic004G149000 Sobic004G081000--Sobic002G280001 Sobic004G081000--Sobic007G200300 Sobic001G361750 Sobic001G361750 Sobic004G081000--Sobic001G361750 Sobic004G081000--Sobic003G079600 Sobic004G081000--Sobic009G147600 Sobic001G350800 Sobic001G350800 Sobic004G081000--Sobic001G350800 Sobic004G081000--Sobic002G227100 Sobic010G242000 Sobic010G242000 Sobic004G081000--Sobic010G242000 Sobic004G202750 Sobic004G202750 Sobic009G147600--Sobic004G202750 Sobic001G028500 Sobic001G028500 Sobic009G147600--Sobic001G028500 Sobic001G312801 Sobic001G312801 Sobic009G147600--Sobic001G312801 Sobic009G147600--Sobic004G149000 Sobic009G147600--Sobic002G320700 Sobic001G104100 Sobic001G104100 Sobic009G147600--Sobic001G104100 Sobic003G030200 Sobic003G030200 Sobic009G147600--Sobic003G030200 Sobic005G025400 Sobic005G025400 Sobic009G147600--Sobic005G025400 Sobic004G190800 Sobic004G190800 Sobic009G147600--Sobic004G190800 Sobic002G227100--Sobic002G280001 Sobic007G174200 Sobic007G174200 Sobic002G227100--Sobic007G174200 Sobic002G227100--Sobic006G270300 Sobic002G227100--Sobic007G200300 Sobic002G227100--Sobic004G149000 Sobic002G266250 Sobic002G266250 Sobic002G227100--Sobic002G266250 Sobic006G170800 Sobic006G170800 Sobic002G227100--Sobic006G170800 Sobic002G227100--Sobic003G079600 Sobic004G305300 Sobic004G305300 Sobic002G227100--Sobic004G305300 Sobic002G280001--Sobic002G227100 Sobic002G280001--Sobic007G200300 Sobic002G280001--Sobic006G270300 Sobic002G280001--Sobic004G149000 Sobic002G280001--Sobic004G081000 Sobic002G280001--Sobic004G203600 Sobic002G280001--Sobic002G266250 Sobic006G024400 Sobic006G024400 Sobic002G280001--Sobic006G024400 Sobic002G280001--Sobic003G079600 Sobic002G320700--Sobic004G202750 Sobic002G320700--Sobic006G170800 Sobic001G033200 Sobic001G033200 Sobic002G320700--Sobic001G033200 Sobic002G320700--Sobic001G104100 Sobic001G350300 Sobic001G350300 Sobic002G320700--Sobic001G350300 Sobic002G320700--Sobic001G028500 Sobic004G350600 Sobic004G350600 Sobic002G320700--Sobic004G350600 Sobic001G071700 Sobic001G071700 Sobic002G320700--Sobic001G071700 Sobic002G399000 Sobic002G399000 Sobic002G320700--Sobic002G399000 Sobic006G270300--Sobic002G227100 Sobic006G270300--Sobic004G203600 Sobic006G270300--Sobic007G200300 Sobic006G270300--Sobic002G280001 Sobic006G270300--Sobic004G149000 Sobic006G270300--Sobic003G079600 Sobic003G150700 Sobic003G150700 Sobic006G270300--Sobic003G150700 Sobic002G123700 Sobic002G123700 Sobic006G270300--Sobic002G123700 Sobic006G270300--Sobic006G111400 Sobic003G079600--Sobic003G150700 Sobic009G208000 Sobic009G208000 Sobic003G079600--Sobic009G208000 Sobic003G079600--Sobic004G149000 Sobic003G079600--Sobic002G227100 Sobic003G040300 Sobic003G040300 Sobic003G079600--Sobic003G040300 Sobic003G079600--Sobic006G270300 Sobic007G010400 Sobic007G010400 Sobic003G079600--Sobic007G010400 Sobic004G181000 Sobic004G181000 Sobic003G079600--Sobic004G181000 Sobic002G001500 Sobic002G001500 Sobic003G079600--Sobic002G001500 Sobic005G063600 Sobic005G063600 Sobic006G169600--Sobic005G063600 Sobic009G160100 Sobic009G160100 Sobic006G169600--Sobic009G160100 Sobic006G169600--Sobic006G111400 Sobic003G155800 Sobic003G155800 Sobic006G169600--Sobic003G155800 Sobic006G169600--Sobic004G350600 Sobic006G169600--Sobic009G199900 Sobic006G169600--Sobic004G181000 Sobic002G234800 Sobic002G234800 Sobic006G169600--Sobic002G234800 Sobic006G169600--Sobic003G150700
Octagon: transcription factors


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