Gene annotation
Transcriptome id Sobic.004G081000.1
Synonym
Functional annotation -
UniProt A0A194YPF9
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G149000 - -
2 Sobic.002G280001 - -
3 Sobic.007G200300 lectin protein kinase family protein, putative, expressed -
4 Sobic.001G361750 - -
5 Sobic.003G079600 expressed protein -
6 Sobic.009G147600 pentatricopeptide, putative, expressed -
7 Sobic.001G350800 - -
8 Sobic.002G227100 cyclin-dependent kinase inhibitor, putative, expressed -
9 Sobic.010G242000 phytosulfokine receptor precursor, putative, expressed -
10 Sobic.002G320700 expressed protein -
11 Sobic.001G033200 GRAS family transcription factor domain containing protein, expressed -
12 Sobic.004G202750 - -
13 Sobic.004G044500 phytosulfokine receptor precursor, putative, expressed -
14 Sobic.009G020800 - -
15 Sobic.003G276400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Alpha-amylase isozime 2 precursor AMY3 (Os)(PubMedID : 27208977)@alpha-amylase precursor, putative, expressed -
16 Sobic.003G150700 pectinacetylesterase domain containing protein, expressed -
17 Sobic.005G025400 CAMK_CAMK_like.42 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
18 Sobic.006G170800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lactate/malate dehydrogenase, putative, expressed K00025: malate dehydrogenase
19 Sobic.001G071700 protein kinase family protein, putative, expressed -
20 Sobic.003G281400 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA and BR treatments"(PubMedID : 20528920)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC transporter, ATP-binding protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1


Gene co-expression network
sample Sobic004G081000 Sobic004G081000 Sobic004G149000 Sobic004G149000 Sobic004G081000--Sobic004G149000 Sobic002G280001 Sobic002G280001 Sobic004G081000--Sobic002G280001 Sobic007G200300 Sobic007G200300 Sobic004G081000--Sobic007G200300 Sobic001G361750 Sobic001G361750 Sobic004G081000--Sobic001G361750 Sobic003G079600 Sobic003G079600 Sobic004G081000--Sobic003G079600 Sobic009G147600 Sobic009G147600 Sobic004G081000--Sobic009G147600 Sobic001G350800 Sobic001G350800 Sobic004G081000--Sobic001G350800 Sobic002G227100 Sobic002G227100 Sobic004G081000--Sobic002G227100 Sobic010G242000 Sobic010G242000 Sobic004G081000--Sobic010G242000 Sobic004G149000--Sobic007G200300 Sobic004G149000--Sobic004G081000 Sobic004G149000--Sobic009G147600 Sobic004G149000--Sobic002G227100 Sobic004G149000--Sobic002G280001 Sobic002G320700 Sobic002G320700 Sobic004G149000--Sobic002G320700 Sobic006G270300 Sobic006G270300 Sobic004G149000--Sobic006G270300 Sobic004G149000--Sobic003G079600 Sobic006G169600 Sobic006G169600 Sobic004G149000--Sobic006G169600 Sobic002G280001--Sobic002G227100 Sobic002G280001--Sobic007G200300 Sobic002G280001--Sobic006G270300 Sobic002G280001--Sobic004G149000 Sobic002G280001--Sobic004G081000 Sobic004G203600 Sobic004G203600 Sobic002G280001--Sobic004G203600 Sobic002G266250 Sobic002G266250 Sobic002G280001--Sobic002G266250 Sobic006G024400 Sobic006G024400 Sobic002G280001--Sobic006G024400 Sobic002G280001--Sobic003G079600 Sobic007G200300--Sobic004G149000 Sobic007G200300--Sobic002G280001 Sobic007G200300--Sobic006G270300 Sobic007G200300--Sobic002G227100 Sobic007G200300--Sobic002G320700 Sobic007G200300--Sobic004G081000 Sobic009G199900 Sobic009G199900 Sobic007G200300--Sobic009G199900 Sobic006G111400 Sobic006G111400 Sobic007G200300--Sobic006G111400 Sobic007G200300--Sobic004G203600 Sobic001G456650 Sobic001G456650 Sobic001G361750--Sobic001G456650 Sobic001G483200 Sobic001G483200 Sobic001G361750--Sobic001G483200 Sobic001G033200 Sobic001G033200 Sobic001G361750--Sobic001G033200 Sobic001G468200 Sobic001G468200 Sobic001G361750--Sobic001G468200 Sobic001G527900 Sobic001G527900 Sobic001G361750--Sobic001G527900 Sobic002G360701 Sobic002G360701 Sobic001G361750--Sobic002G360701 Sobic009G004300 Sobic009G004300 Sobic001G361750--Sobic009G004300 Sobic005G155001 Sobic005G155001 Sobic001G361750--Sobic005G155001 Sobic006G093400 Sobic006G093400 Sobic001G361750--Sobic006G093400 Sobic003G150700 Sobic003G150700 Sobic003G079600--Sobic003G150700 Sobic009G208000 Sobic009G208000 Sobic003G079600--Sobic009G208000 Sobic003G079600--Sobic004G149000 Sobic003G079600--Sobic002G227100 Sobic003G040300 Sobic003G040300 Sobic003G079600--Sobic003G040300 Sobic003G079600--Sobic006G270300 Sobic007G010400 Sobic007G010400 Sobic003G079600--Sobic007G010400 Sobic004G181000 Sobic004G181000 Sobic003G079600--Sobic004G181000 Sobic002G001500 Sobic002G001500 Sobic003G079600--Sobic002G001500 Sobic004G202750 Sobic004G202750 Sobic009G147600--Sobic004G202750 Sobic001G028500 Sobic001G028500 Sobic009G147600--Sobic001G028500 Sobic001G312801 Sobic001G312801 Sobic009G147600--Sobic001G312801 Sobic009G147600--Sobic004G149000 Sobic009G147600--Sobic002G320700 Sobic001G104100 Sobic001G104100 Sobic009G147600--Sobic001G104100 Sobic003G030200 Sobic003G030200 Sobic009G147600--Sobic003G030200 Sobic005G025400 Sobic005G025400 Sobic009G147600--Sobic005G025400 Sobic004G190800 Sobic004G190800 Sobic009G147600--Sobic004G190800 Sobic001G071700 Sobic001G071700 Sobic001G350800--Sobic001G071700 Sobic001G350800--Sobic004G202750 Sobic001G350800--Sobic001G028500 Sobic001G350800--Sobic004G190800 Sobic007G061500 Sobic007G061500 Sobic001G350800--Sobic007G061500 Sobic004G231501 Sobic004G231501 Sobic001G350800--Sobic004G231501 Sobic010G261500 Sobic010G261500 Sobic001G350800--Sobic010G261500 Sobic004G314100 Sobic004G314100 Sobic001G350800--Sobic004G314100 Sobic001G350800--Sobic001G104100 Sobic002G227100--Sobic002G280001 Sobic007G174200 Sobic007G174200 Sobic002G227100--Sobic007G174200 Sobic002G227100--Sobic006G270300 Sobic002G227100--Sobic007G200300 Sobic002G227100--Sobic004G149000 Sobic002G227100--Sobic002G266250 Sobic006G170800 Sobic006G170800 Sobic002G227100--Sobic006G170800 Sobic002G227100--Sobic003G079600 Sobic004G305300 Sobic004G305300 Sobic002G227100--Sobic004G305300 Sobic010G242000--Sobic005G025400 Sobic010G242000--Sobic006G170800 Sobic008G159800 Sobic008G159800 Sobic010G242000--Sobic008G159800 Sobic007G114650 Sobic007G114650 Sobic010G242000--Sobic007G114650 Sobic002G399000 Sobic002G399000 Sobic010G242000--Sobic002G399000 Sobic003G440500 Sobic003G440500 Sobic010G242000--Sobic003G440500 Sobic001G350300 Sobic001G350300 Sobic010G242000--Sobic001G350300 Sobic008G134500 Sobic008G134500 Sobic010G242000--Sobic008G134500 Sobic010G242000--Sobic002G320700
Octagon: transcription factors


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