Gene annotation
Transcriptome id Sobic.002G280001.1
Synonym -
Functional annotation -
UniProt A0A1W0W607
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G227100 cyclin-dependent kinase inhibitor, putative, expressed -
2 Sobic.007G200300 lectin protein kinase family protein, putative, expressed -
3 Sobic.006G270300 Mlo family(PubMedID : 29491869)@MLO domain containing protein, putative, expressed K08472: mlo protein
4 Sobic.004G149000 - -
5 Sobic.004G081000 - -
6 Sobic.004G203600 Regulator of chromosome condensation domain containing protein, expressed -
7 Sobic.002G266250 - -
8 Sobic.006G024400 receptor-like protein kinase, putative, expressed -
9 Sobic.003G079600 expressed protein -
10 Sobic.003G281400 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA and BR treatments"(PubMedID : 20528920)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC transporter, ATP-binding protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
11 Sobic.002G320700 expressed protein -
12 Sobic.007G174200 carrier, putative, expressed -
13 Sobic.004G007200 - -
14 Sobic.006G170800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lactate/malate dehydrogenase, putative, expressed K00025: malate dehydrogenase
15 Sobic.003G276400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Alpha-amylase isozime 2 precursor AMY3 (Os)(PubMedID : 27208977)@alpha-amylase precursor, putative, expressed -
16 Sobic.010G242000 phytosulfokine receptor precursor, putative, expressed -
17 Sobic.004G044500 phytosulfokine receptor precursor, putative, expressed -
18 Sobic.001G361750 - -
19 Sobic.004G190300 expressed protein -
20 Sobic.004G177500 expressed protein -


Gene co-expression network
sample Sobic002G280001 Sobic002G280001 Sobic002G227100 Sobic002G227100 Sobic002G280001--Sobic002G227100 Sobic007G200300 Sobic007G200300 Sobic002G280001--Sobic007G200300 Sobic006G270300 Sobic006G270300 Sobic002G280001--Sobic006G270300 Sobic004G149000 Sobic004G149000 Sobic002G280001--Sobic004G149000 Sobic004G081000 Sobic004G081000 Sobic002G280001--Sobic004G081000 Sobic004G203600 Sobic004G203600 Sobic002G280001--Sobic004G203600 Sobic002G266250 Sobic002G266250 Sobic002G280001--Sobic002G266250 Sobic006G024400 Sobic006G024400 Sobic002G280001--Sobic006G024400 Sobic003G079600 Sobic003G079600 Sobic002G280001--Sobic003G079600 Sobic002G227100--Sobic002G280001 Sobic007G174200 Sobic007G174200 Sobic002G227100--Sobic007G174200 Sobic002G227100--Sobic006G270300 Sobic002G227100--Sobic007G200300 Sobic002G227100--Sobic004G149000 Sobic002G227100--Sobic002G266250 Sobic006G170800 Sobic006G170800 Sobic002G227100--Sobic006G170800 Sobic002G227100--Sobic003G079600 Sobic004G305300 Sobic004G305300 Sobic002G227100--Sobic004G305300 Sobic007G200300--Sobic004G149000 Sobic007G200300--Sobic002G280001 Sobic007G200300--Sobic006G270300 Sobic007G200300--Sobic002G227100 Sobic002G320700 Sobic002G320700 Sobic007G200300--Sobic002G320700 Sobic007G200300--Sobic004G081000 Sobic009G199900 Sobic009G199900 Sobic007G200300--Sobic009G199900 Sobic006G111400 Sobic006G111400 Sobic007G200300--Sobic006G111400 Sobic007G200300--Sobic004G203600 Sobic006G270300--Sobic002G227100 Sobic006G270300--Sobic004G203600 Sobic006G270300--Sobic007G200300 Sobic006G270300--Sobic002G280001 Sobic006G270300--Sobic004G149000 Sobic006G270300--Sobic003G079600 Sobic003G150700 Sobic003G150700 Sobic006G270300--Sobic003G150700 Sobic002G123700 Sobic002G123700 Sobic006G270300--Sobic002G123700 Sobic006G270300--Sobic006G111400 Sobic004G149000--Sobic007G200300 Sobic004G149000--Sobic004G081000 Sobic009G147600 Sobic009G147600 Sobic004G149000--Sobic009G147600 Sobic004G149000--Sobic002G227100 Sobic004G149000--Sobic002G280001 Sobic004G149000--Sobic002G320700 Sobic004G149000--Sobic006G270300 Sobic004G149000--Sobic003G079600 Sobic006G169600 Sobic006G169600 Sobic004G149000--Sobic006G169600 Sobic004G081000--Sobic004G149000 Sobic004G081000--Sobic002G280001 Sobic004G081000--Sobic007G200300 Sobic001G361750 Sobic001G361750 Sobic004G081000--Sobic001G361750 Sobic004G081000--Sobic003G079600 Sobic004G081000--Sobic009G147600 Sobic001G350800 Sobic001G350800 Sobic004G081000--Sobic001G350800 Sobic004G081000--Sobic002G227100 Sobic010G242000 Sobic010G242000 Sobic004G081000--Sobic010G242000 Sobic004G203600--Sobic006G270300 Sobic001G033200 Sobic001G033200 Sobic004G203600--Sobic001G033200 Sobic004G203600--Sobic002G320700 Sobic004G203600--Sobic002G123700 Sobic002G314950 Sobic002G314950 Sobic004G203600--Sobic002G314950 Sobic004G203600--Sobic003G150700 Sobic006G121200 Sobic006G121200 Sobic004G203600--Sobic006G121200 Sobic001G104100 Sobic001G104100 Sobic004G203600--Sobic001G104100 Sobic004G203600--Sobic007G200300 Sobic002G266250--Sobic007G174200 Sobic002G266250--Sobic002G227100 Sobic009G192933 Sobic009G192933 Sobic002G266250--Sobic009G192933 Sobic002G266250--Sobic002G280001 Sobic001G204400 Sobic001G204400 Sobic002G266250--Sobic001G204400 Sobic002G266250--Sobic004G305300 Sobic002G266250--Sobic004G203600 Sobic002G266250--Sobic003G079600 Sobic001G350300 Sobic001G350300 Sobic002G266250--Sobic001G350300 Sobic004G007200 Sobic004G007200 Sobic006G024400--Sobic004G007200 Sobic003G001650 Sobic003G001650 Sobic006G024400--Sobic003G001650 Sobic003G276400 Sobic003G276400 Sobic006G024400--Sobic003G276400 Sobic005G014400 Sobic005G014400 Sobic006G024400--Sobic005G014400 Sobic003G251900 Sobic003G251900 Sobic006G024400--Sobic003G251900 Sobic006G024400--Sobic001G104100 Sobic010G201444 Sobic010G201444 Sobic006G024400--Sobic010G201444 Sobic001G113400 Sobic001G113400 Sobic006G024400--Sobic001G113400 Sobic006G024400--Sobic009G199900 Sobic003G079600--Sobic003G150700 Sobic009G208000 Sobic009G208000 Sobic003G079600--Sobic009G208000 Sobic003G079600--Sobic004G149000 Sobic003G079600--Sobic002G227100 Sobic003G040300 Sobic003G040300 Sobic003G079600--Sobic003G040300 Sobic003G079600--Sobic006G270300 Sobic007G010400 Sobic007G010400 Sobic003G079600--Sobic007G010400 Sobic004G181000 Sobic004G181000 Sobic003G079600--Sobic004G181000 Sobic002G001500 Sobic002G001500 Sobic003G079600--Sobic002G001500
Octagon: transcription factors


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