Gene annotation
Transcriptome id Sobic.003G281400.1
Synonym Sb03g033290, P-glycoprotein, SbPGP8;P-glycoprotein, SbPGP8
Functional annotation "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA and BR treatments" (PubMedID : 20528920)
SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
ABC transporter, ATP-binding protein, putative, expressed
UniProt C5XIE9 , Q09EL5
Pfam PF00005 PF00664
Panther DB PTHR24221 PTHR24221:SF228
NCBI CDD -
KEGG Orthology K05658; ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
Gene Ontology GO:0016887; ATPase activity GO:0005524ATP binding GO:0016021integral component of membrane GO:0006810transport


Orthologs (automatic annotation)
TAIR AT3G28345 : ABC transporter family protein
RAP-DB (Rice) LOC_Os01g52550.1 : ABC transporter, ATP-binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a027737
Brachypodium KQJ95403 , KQK09538 , KQK09539
Barley HORVU0Hr1G015570.1 , HORVU0Hr1G015570.2 , HORVU0Hr1G015570.3 , HORVU0Hr1G015570.4 , HORVU0Hr1G015570.5 , HORVU0Hr1G015570.6 , HORVU3Hr1G068650.10 , HORVU3Hr1G068650.11 , HORVU7Hr1G071870.14 , HORVU7Hr1G071870.15 , HORVU7Hr1G071870.13 , HORVU3Hr1G068650.8 , HORVU3Hr1G068650.9 , HORVU3Hr1G068650.6 , HORVU3Hr1G068650.7 , HORVU3Hr1G068650.4 , HORVU3Hr1G068650.5 , HORVU3Hr1G068650.2 , HORVU3Hr1G068650.3 , HORVU3Hr1G068650.1
Wheat TraesCS7D02G298400 , TraesCS3D02G285100 , TraesCS3D02G285100 , TraesCS3D02G285100 , TraesCS3D02G285100 , TraesCS3B02G319100 , TraesCS3B02G319100 , TraesCS3B02G319100 , TraesCS3B02G319100 , TraesCS6B02G170700 , TraesCS3A02G285200 , TraesCS7A02G303100 , TraesCS7B02G203300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G200300 lectin protein kinase family protein, putative, expressed -
2 Sobic.003G390600 AP2/EREBP transcription factor BABY BOOM, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
3 Sobic.002G280001 - -
4 Sobic.001G361750 - -
5 Sobic.006G154900 mitochondrial carrier protein, putative, expressed -
6 Sobic.004G073166 - -
7 Sobic.002G360701 - -
8 Sobic.009G199900 osFTL10 FT-Like10 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
9 Sobic.004G203600 Regulator of chromosome condensation domain containing protein, expressed -
10 Sobic.004G149000 - -
11 Sobic.006G024400 receptor-like protein kinase, putative, expressed -
12 Sobic.001G487250 - -
13 Sobic.009G004300 ECT protein, putative, expressed -
14 Sobic.004G044500 phytosulfokine receptor precursor, putative, expressed -
15 Sobic.010G150600 - -
16 Sobic.008G024700 DUF567 domain containing protein, putative, expressed -
17 Sobic.004G081000 - -
18 Sobic.006G270300 Mlo family(PubMedID : 29491869)@MLO domain containing protein, putative, expressed K08472: mlo protein
19 Sobic.004G190300 expressed protein -
20 Sobic.002G314950 - -


Gene co-expression network
sample Sobic003G281400 Sobic003G281400 Sobic007G200300 Sobic007G200300 Sobic003G281400--Sobic007G200300 Sobic003G390600 Sobic003G390600 Sobic003G281400--Sobic003G390600 Sobic002G280001 Sobic002G280001 Sobic003G281400--Sobic002G280001 Sobic001G361750 Sobic001G361750 Sobic003G281400--Sobic001G361750 Sobic006G154900 Sobic006G154900 Sobic003G281400--Sobic006G154900 Sobic004G073166 Sobic004G073166 Sobic003G281400--Sobic004G073166 Sobic002G360701 Sobic002G360701 Sobic003G281400--Sobic002G360701 Sobic009G199900 Sobic009G199900 Sobic003G281400--Sobic009G199900 Sobic004G203600 Sobic004G203600 Sobic003G281400--Sobic004G203600 Sobic004G149000 Sobic004G149000 Sobic007G200300--Sobic004G149000 Sobic007G200300--Sobic002G280001 Sobic006G270300 Sobic006G270300 Sobic007G200300--Sobic006G270300 Sobic002G227100 Sobic002G227100 Sobic007G200300--Sobic002G227100 Sobic002G320700 Sobic002G320700 Sobic007G200300--Sobic002G320700 Sobic004G081000 Sobic004G081000 Sobic007G200300--Sobic004G081000 Sobic007G200300--Sobic009G199900 Sobic006G111400 Sobic006G111400 Sobic007G200300--Sobic006G111400 Sobic007G200300--Sobic004G203600 Sobic003G390600--Sobic003G281400 Sobic004G044500 Sobic004G044500 Sobic003G390600--Sobic004G044500 Sobic006G027800 Sobic006G027800 Sobic003G390600--Sobic006G027800 Sobic007G174701 Sobic007G174701 Sobic003G390600--Sobic007G174701 Sobic004G084800 Sobic004G084800 Sobic003G390600--Sobic004G084800 Sobic004G073700 Sobic004G073700 Sobic003G390600--Sobic004G073700 Sobic004G341500 Sobic004G341500 Sobic003G390600--Sobic004G341500 Sobic007G174000 Sobic007G174000 Sobic003G390600--Sobic007G174000 Sobic001G084300 Sobic001G084300 Sobic003G390600--Sobic001G084300 Sobic002G280001--Sobic002G227100 Sobic002G280001--Sobic007G200300 Sobic002G280001--Sobic006G270300 Sobic002G280001--Sobic004G149000 Sobic002G280001--Sobic004G081000 Sobic002G280001--Sobic004G203600 Sobic002G266250 Sobic002G266250 Sobic002G280001--Sobic002G266250 Sobic006G024400 Sobic006G024400 Sobic002G280001--Sobic006G024400 Sobic003G079600 Sobic003G079600 Sobic002G280001--Sobic003G079600 Sobic001G456650 Sobic001G456650 Sobic001G361750--Sobic001G456650 Sobic001G483200 Sobic001G483200 Sobic001G361750--Sobic001G483200 Sobic001G033200 Sobic001G033200 Sobic001G361750--Sobic001G033200 Sobic001G468200 Sobic001G468200 Sobic001G361750--Sobic001G468200 Sobic001G527900 Sobic001G527900 Sobic001G361750--Sobic001G527900 Sobic001G361750--Sobic002G360701 Sobic009G004300 Sobic009G004300 Sobic001G361750--Sobic009G004300 Sobic005G155001 Sobic005G155001 Sobic001G361750--Sobic005G155001 Sobic006G093400 Sobic006G093400 Sobic001G361750--Sobic006G093400 Sobic008G007200 Sobic008G007200 Sobic006G154900--Sobic008G007200 Sobic002G018133 Sobic002G018133 Sobic006G154900--Sobic002G018133 Sobic001G093732 Sobic001G093732 Sobic006G154900--Sobic001G093732 Sobic010G217001 Sobic010G217001 Sobic006G154900--Sobic010G217001 Sobic008G078500 Sobic008G078500 Sobic006G154900--Sobic008G078500 Sobic009G184500 Sobic009G184500 Sobic006G154900--Sobic009G184500 Sobic006G154900--Sobic002G360701 Sobic004G273500 Sobic004G273500 Sobic006G154900--Sobic004G273500 Sobic010G201444 Sobic010G201444 Sobic006G154900--Sobic010G201444 Sobic002G123700 Sobic002G123700 Sobic004G073166--Sobic002G123700 Sobic004G073166--Sobic003G281400 Sobic004G073166--Sobic006G154900 Sobic004G073166--Sobic004G203600 Sobic004G073166--Sobic006G270300 Sobic006G232300 Sobic006G232300 Sobic004G073166--Sobic006G232300 Sobic004G073166--Sobic008G007200 Sobic007G213500 Sobic007G213500 Sobic004G073166--Sobic007G213500 Sobic006G121200 Sobic006G121200 Sobic004G073166--Sobic006G121200 Sobic002G360701--Sobic009G184500 Sobic002G360701--Sobic001G483200 Sobic007G017300 Sobic007G017300 Sobic002G360701--Sobic007G017300 Sobic002G360701--Sobic005G155001 Sobic004G190800 Sobic004G190800 Sobic002G360701--Sobic004G190800 Sobic002G360701--Sobic007G213500 Sobic002G360701--Sobic001G361750 Sobic002G360701--Sobic001G468200 Sobic001G368000 Sobic001G368000 Sobic002G360701--Sobic001G368000 Sobic001G104100 Sobic001G104100 Sobic009G199900--Sobic001G104100 Sobic001G028500 Sobic001G028500 Sobic009G199900--Sobic001G028500 Sobic003G106100 Sobic003G106100 Sobic009G199900--Sobic003G106100 Sobic004G202750 Sobic004G202750 Sobic009G199900--Sobic004G202750 Sobic004G350600 Sobic004G350600 Sobic009G199900--Sobic004G350600 Sobic004G231501 Sobic004G231501 Sobic009G199900--Sobic004G231501 Sobic004G026000 Sobic004G026000 Sobic009G199900--Sobic004G026000 Sobic003G155800 Sobic003G155800 Sobic009G199900--Sobic003G155800 Sobic004G314100 Sobic004G314100 Sobic009G199900--Sobic004G314100 Sobic004G203600--Sobic006G270300 Sobic004G203600--Sobic001G033200 Sobic004G203600--Sobic002G320700 Sobic004G203600--Sobic002G123700 Sobic002G314950 Sobic002G314950 Sobic004G203600--Sobic002G314950 Sobic003G150700 Sobic003G150700 Sobic004G203600--Sobic003G150700 Sobic004G203600--Sobic006G121200 Sobic004G203600--Sobic001G104100 Sobic004G203600--Sobic007G200300
Octagon: transcription factors


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