Gene annotation
Transcriptome id Sobic.003G390600.1
Synonym Sb03g042810, BBM
Functional annotation AP2/EREBP transcription factor BABY BOOM, putative, expressed
UniProt A0A1B6Q7P1
Pfam PF00847
Panther DB PTHR32467 PTHR32467:SF8
NCBI CDD -
KEGG Orthology K09285; OVM, AP2-like factor, ANT lineage
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity GO:0007275multicellular organism development


Orthologs (automatic annotation)
TAIR AT5G17430 : Integrase-type DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os01g67410.1 : AP2/EREBP transcription factor BABY BOOM, putative, expressed
MaizeGDB (Corn) Zm00025a016203 , Zm00025a026413
Brachypodium PNT73386 , PNT77831 , PNT77830 , PNT77828 , PNT77829 , PNT77833 , PNT77832 , PNT77826 , PNT77827
Barley HORVU2Hr1G087310.8 , HORVU2Hr1G087310.5 , HORVU2Hr1G087310.4 , HORVU2Hr1G087310.7 , HORVU2Hr1G087310.6 , HORVU2Hr1G087310.1 , HORVU2Hr1G087310.3 , HORVU2Hr1G087310.2 , HORVU3Hr1G089160.1 , HORVU3Hr1G089160.3 , HORVU3Hr1G089160.2 , HORVU3Hr1G089160.5 , HORVU3Hr1G089160.4
Wheat TraesCS2D02G357600 , TraesCS7D02G483200 , TraesCS7D02G483200 , TraesCS3A02G395500 , TraesCS5D02G415500 , TraesCS5A02G405400 , TraesCS3B02G427300 , TraesCS3D02G389100 , TraesCS2B02G378100 , TraesCS5B02G410200
Populus PNT36799 , PNT36798 , PNT02410 , PNT55017 , PNT55016 , PNT02352 , PNT02353 , PNT43997


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G281400 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA and BR treatments"(PubMedID : 20528920)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC transporter, ATP-binding protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
2 Sobic.004G044500 phytosulfokine receptor precursor, putative, expressed -
3 Sobic.006G027800 disease resistance RPP13-like protein 1, putative, expressed -
4 Sobic.007G174701 - -
5 Sobic.004G084800 - -
6 Sobic.004G073700 - -
7 Sobic.004G341500 O-methyltransferase, putative, expressed -
8 Sobic.007G174000 carrier, putative, expressed -
9 Sobic.001G084300 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
10 Sobic.006G024400 receptor-like protein kinase, putative, expressed -
11 Sobic.008G024700 DUF567 domain containing protein, putative, expressed -
12 Sobic.001G487250 - -
13 Sobic.002G280001 - -
14 Sobic.004G081000 - -
15 Sobic.010G183900 expressed protein -
16 Sobic.009G020800 - -
17 Sobic.001G513900 - -
18 Sobic.008G192400 carbohydrate binding protein, putative, expressed -
19 Sobic.004G139201 - -
20 Sobic.006G154900 mitochondrial carrier protein, putative, expressed -


Gene co-expression network
sample Sobic003G390600 Sobic003G390600 Sobic003G281400 Sobic003G281400 Sobic003G390600--Sobic003G281400 Sobic004G044500 Sobic004G044500 Sobic003G390600--Sobic004G044500 Sobic006G027800 Sobic006G027800 Sobic003G390600--Sobic006G027800 Sobic007G174701 Sobic007G174701 Sobic003G390600--Sobic007G174701 Sobic004G084800 Sobic004G084800 Sobic003G390600--Sobic004G084800 Sobic004G073700 Sobic004G073700 Sobic003G390600--Sobic004G073700 Sobic004G341500 Sobic004G341500 Sobic003G390600--Sobic004G341500 Sobic007G174000 Sobic007G174000 Sobic003G390600--Sobic007G174000 Sobic001G084300 Sobic001G084300 Sobic003G390600--Sobic001G084300 Sobic007G200300 Sobic007G200300 Sobic003G281400--Sobic007G200300 Sobic003G281400--Sobic003G390600 Sobic002G280001 Sobic002G280001 Sobic003G281400--Sobic002G280001 Sobic001G361750 Sobic001G361750 Sobic003G281400--Sobic001G361750 Sobic006G154900 Sobic006G154900 Sobic003G281400--Sobic006G154900 Sobic004G073166 Sobic004G073166 Sobic003G281400--Sobic004G073166 Sobic002G360701 Sobic002G360701 Sobic003G281400--Sobic002G360701 Sobic009G199900 Sobic009G199900 Sobic003G281400--Sobic009G199900 Sobic004G203600 Sobic004G203600 Sobic003G281400--Sobic004G203600 Sobic004G044500--Sobic003G390600 Sobic004G044500--Sobic003G281400 Sobic004G081000 Sobic004G081000 Sobic004G044500--Sobic004G081000 Sobic004G044500--Sobic007G200300 Sobic004G044500--Sobic002G280001 Sobic005G014400 Sobic005G014400 Sobic004G044500--Sobic005G014400 Sobic006G024400 Sobic006G024400 Sobic004G044500--Sobic006G024400 Sobic004G044500--Sobic006G154900 Sobic005G031100 Sobic005G031100 Sobic004G044500--Sobic005G031100 Sobic009G180900 Sobic009G180900 Sobic006G027800--Sobic009G180900 Sobic009G218450 Sobic009G218450 Sobic006G027800--Sobic009G218450 Sobic010G175100 Sobic010G175100 Sobic006G027800--Sobic010G175100 Sobic008G064200 Sobic008G064200 Sobic006G027800--Sobic008G064200 Sobic005G083400 Sobic005G083400 Sobic006G027800--Sobic005G083400 Sobic010G201444 Sobic010G201444 Sobic006G027800--Sobic010G201444 Sobic001G005100 Sobic001G005100 Sobic006G027800--Sobic001G005100 Sobic006G027800--Sobic007G174000 Sobic004G221100 Sobic004G221100 Sobic006G027800--Sobic004G221100 Sobic007G206600 Sobic007G206600 Sobic007G174701--Sobic007G206600 Sobic008G086100 Sobic008G086100 Sobic007G174701--Sobic008G086100 Sobic006G119100 Sobic006G119100 Sobic007G174701--Sobic006G119100 Sobic004G223350 Sobic004G223350 Sobic007G174701--Sobic004G223350 Sobic007G173901 Sobic007G173901 Sobic007G174701--Sobic007G173901 Sobic002G142350 Sobic002G142350 Sobic007G174701--Sobic002G142350 Sobic002G262500 Sobic002G262500 Sobic007G174701--Sobic002G262500 Sobic004G357600 Sobic004G357600 Sobic007G174701--Sobic004G357600 Sobic007G038200 Sobic007G038200 Sobic007G174701--Sobic007G038200 Sobic004G139201 Sobic004G139201 Sobic004G084800--Sobic004G139201 Sobic007G218550 Sobic007G218550 Sobic004G084800--Sobic007G218550 Sobic010G083200 Sobic010G083200 Sobic004G084800--Sobic010G083200 Sobic004G084800--Sobic004G341500 Sobic002G269700 Sobic002G269700 Sobic004G084800--Sobic002G269700 Sobic004G084800--Sobic001G005100 Sobic002G162900 Sobic002G162900 Sobic004G084800--Sobic002G162900 Sobic004G084800--Sobic003G390600 Sobic002G268250 Sobic002G268250 Sobic004G084800--Sobic002G268250 Sobic004G073700--Sobic004G139201 Sobic004G073700--Sobic001G084300 Sobic004G073700--Sobic003G390600 Sobic004G073700--Sobic007G218550 Sobic004G073700--Sobic007G174000 Sobic004G073700--Sobic002G269700 Sobic009G026900 Sobic009G026900 Sobic004G073700--Sobic009G026900 Sobic004G073700--Sobic007G174701 Sobic002G152400 Sobic002G152400 Sobic004G073700--Sobic002G152400 Sobic004G341500--Sobic004G084800 Sobic004G341500--Sobic004G139201 Sobic001G004901 Sobic001G004901 Sobic004G341500--Sobic001G004901 Sobic004G341500--Sobic003G390600 Sobic010G183900 Sobic010G183900 Sobic004G341500--Sobic010G183900 Sobic004G045100 Sobic004G045100 Sobic004G341500--Sobic004G045100 Sobic004G341500--Sobic004G073700 Sobic004G341500--Sobic007G218550 Sobic002G427201 Sobic002G427201 Sobic004G341500--Sobic002G427201 Sobic008G078500 Sobic008G078500 Sobic007G174000--Sobic008G078500 Sobic004G203633 Sobic004G203633 Sobic007G174000--Sobic004G203633 Sobic003G399200 Sobic003G399200 Sobic007G174000--Sobic003G399200 Sobic007G155950 Sobic007G155950 Sobic007G174000--Sobic007G155950 Sobic007G174000--Sobic004G357600 Sobic005G182100 Sobic005G182100 Sobic007G174000--Sobic005G182100 Sobic007G225050 Sobic007G225050 Sobic007G174000--Sobic007G225050 Sobic007G137100 Sobic007G137100 Sobic007G174000--Sobic007G137100 Sobic001G093732 Sobic001G093732 Sobic007G174000--Sobic001G093732 Sobic001G084300--Sobic004G073700 Sobic001G084300--Sobic002G152400 Sobic001G084300--Sobic003G390600 Sobic001G084300--Sobic002G269700 Sobic001G354900 Sobic001G354900 Sobic001G084300--Sobic001G354900 Sobic001G084300--Sobic003G281400 Sobic001G536300 Sobic001G536300 Sobic001G084300--Sobic001G536300 Sobic001G084300--Sobic006G027800 Sobic008G047900 Sobic008G047900 Sobic001G084300--Sobic008G047900
Octagon: transcription factors


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