Gene annotation
Transcriptome id Sobic.008G192400.1
Synonym Sb08g023250
Functional annotation carbohydrate binding protein, putative, expressed
UniProt C5YT42
Pfam PF08276 PF01453 PF00069
Panther DB PTHR27002 PTHR27002:SF23
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G35370 : S-locus lectin protein kinase family protein
RAP-DB (Rice) LOC_Os12g44320.1 : carbohydrate binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a004891 , Zm00025a003599 , Zm00025a038766 , Zm00025a047236
Brachypodium KQJ90504 , KQJ85078 , KQJ85080 , KQJ96216 , KQK17558 , PNT62041 , KQK22464 , KQJ85079 , PNT69563 , KQJ85553 , PNT71291
Barley HORVU1Hr1G064680.1 , HORVU5Hr1G000240.5 , HORVU5Hr1G000240.4 , HORVU5Hr1G000240.3 , HORVU5Hr1G000240.2 , HORVU4Hr1G010030.14 , HORVU4Hr1G010030.15 , HORVU4Hr1G010030.16 , HORVU4Hr1G010030.17 , HORVU4Hr1G010030.10 , HORVU4Hr1G010030.11 , HORVU4Hr1G010030.12 , HORVU4Hr1G010030.13 , HORVU4Hr1G010030.18 , HORVU4Hr1G010030.19 , HORVU1Hr1G064680.2 , HORVU4Hr1G010030.8 , HORVU4Hr1G010030.9 , HORVU4Hr1G010030.6 , HORVU4Hr1G010030.7 , HORVU4Hr1G010030.4 , HORVU4Hr1G010030.5 , HORVU4Hr1G010030.2 , HORVU4Hr1G010030.3 , HORVU4Hr1G010030.1 , HORVU4Hr1G010030.29 , HORVU4Hr1G010030.21 , HORVU4Hr1G010030.20 , HORVU4Hr1G010030.23 , HORVU4Hr1G010030.22 , HORVU4Hr1G010030.25 , HORVU4Hr1G010030.24 , HORVU4Hr1G010030.27 , HORVU4Hr1G010030.26 , HORVU7Hr1G105190.2 , HORVU7Hr1G105190.1 , HORVU4Hr1G010030.36 , HORVU4Hr1G010030.32 , HORVU4Hr1G010030.33 , HORVU4Hr1G010030.30 , HORVU4Hr1G010030.34 , HORVU4Hr1G010030.35 , HORVU4Hr1G010030.31 , HORVU6Hr1G080460.1 , HORVU5Hr1G068070.1 , HORVU5Hr1G068070.2 , HORVU4Hr1G010030.28
Wheat TraesCS2A02G503800 , TraesCS2B02G532100 , TraesCS7B02G357100 , TraesCS2B02G532000 , TraesCS2D02G505200 , TraesCS2D02G504400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G487250 - -
2 Sobic.003G390600 AP2/EREBP transcription factor BABY BOOM, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
3 Sobic.010G002500 integral membrane protein, putative, expressed -
4 Sobic.008G024700 DUF567 domain containing protein, putative, expressed -
5 Sobic.007G206600 - -
6 Sobic.009G020800 - -
7 Sobic.010G084900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@protein kinase family protein, putative, expressed -
8 Sobic.006G109850 - -
9 Sobic.004G081000 - -
10 Sobic.001G513900 - -
11 Sobic.006G073700 expressed protein -
12 Sobic.009G049100 - -
13 Sobic.003G281400 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA and BR treatments"(PubMedID : 20528920)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC transporter, ATP-binding protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
14 Sobic.005G011500 peroxidase precursor, putative, expressed K00430: peroxidase
15 Sobic.005G139000 expressed protein -
16 Sobic.004G230800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytokinin-O-glucosyltransferase 2, putative, expressed -
17 Sobic.008G096300 - -
18 Sobic.001G361750 - -
19 Sobic.008G086100 - -
20 Sobic.003G276700 "domain confirmed by Pfam database, expressed in flower, expression induced by IAA and ABA treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein


Gene co-expression network
sample Sobic008G192400 Sobic008G192400 Sobic001G487250 Sobic001G487250 Sobic008G192400--Sobic001G487250 Sobic003G390600 Sobic003G390600 Sobic008G192400--Sobic003G390600 Sobic010G002500 Sobic010G002500 Sobic008G192400--Sobic010G002500 Sobic008G024700 Sobic008G024700 Sobic008G192400--Sobic008G024700 Sobic007G206600 Sobic007G206600 Sobic008G192400--Sobic007G206600 Sobic009G020800 Sobic009G020800 Sobic008G192400--Sobic009G020800 Sobic010G084900 Sobic010G084900 Sobic008G192400--Sobic010G084900 Sobic006G109850 Sobic006G109850 Sobic008G192400--Sobic006G109850 Sobic004G081000 Sobic004G081000 Sobic008G192400--Sobic004G081000 Sobic003G155350 Sobic003G155350 Sobic001G487250--Sobic003G155350 Sobic001G513900 Sobic001G513900 Sobic001G487250--Sobic001G513900 Sobic009G144050 Sobic009G144050 Sobic001G487250--Sobic009G144050 Sobic004G230800 Sobic004G230800 Sobic001G487250--Sobic004G230800 Sobic001G487250--Sobic008G024700 Sobic009G004300 Sobic009G004300 Sobic001G487250--Sobic009G004300 Sobic002G360701 Sobic002G360701 Sobic001G487250--Sobic002G360701 Sobic005G139000 Sobic005G139000 Sobic001G487250--Sobic005G139000 Sobic004G184500 Sobic004G184500 Sobic001G487250--Sobic004G184500 Sobic003G281400 Sobic003G281400 Sobic003G390600--Sobic003G281400 Sobic004G044500 Sobic004G044500 Sobic003G390600--Sobic004G044500 Sobic006G027800 Sobic006G027800 Sobic003G390600--Sobic006G027800 Sobic007G174701 Sobic007G174701 Sobic003G390600--Sobic007G174701 Sobic004G084800 Sobic004G084800 Sobic003G390600--Sobic004G084800 Sobic004G073700 Sobic004G073700 Sobic003G390600--Sobic004G073700 Sobic004G341500 Sobic004G341500 Sobic003G390600--Sobic004G341500 Sobic007G174000 Sobic007G174000 Sobic003G390600--Sobic007G174000 Sobic001G084300 Sobic001G084300 Sobic003G390600--Sobic001G084300 Sobic001G368000 Sobic001G368000 Sobic010G002500--Sobic001G368000 Sobic007G017300 Sobic007G017300 Sobic010G002500--Sobic007G017300 Sobic009G004500 Sobic009G004500 Sobic010G002500--Sobic009G004500 Sobic010G021401 Sobic010G021401 Sobic010G002500--Sobic010G021401 Sobic001G483200 Sobic001G483200 Sobic010G002500--Sobic001G483200 Sobic005G155001 Sobic005G155001 Sobic010G002500--Sobic005G155001 Sobic009G114900 Sobic009G114900 Sobic010G002500--Sobic009G114900 Sobic007G061500 Sobic007G061500 Sobic010G002500--Sobic007G061500 Sobic002G314950 Sobic002G314950 Sobic010G002500--Sobic002G314950 Sobic009G049100 Sobic009G049100 Sobic008G024700--Sobic009G049100 Sobic001G460150 Sobic001G460150 Sobic008G024700--Sobic001G460150 Sobic004G190800 Sobic004G190800 Sobic008G024700--Sobic004G190800 Sobic006G121200 Sobic006G121200 Sobic008G024700--Sobic006G121200 Sobic008G024700--Sobic002G360701 Sobic003G336300 Sobic003G336300 Sobic008G024700--Sobic003G336300 Sobic008G024700--Sobic001G513900 Sobic008G024700--Sobic001G487250 Sobic004G223350 Sobic004G223350 Sobic008G024700--Sobic004G223350 Sobic007G206600--Sobic007G174701 Sobic008G086100 Sobic008G086100 Sobic007G206600--Sobic008G086100 Sobic006G119100 Sobic006G119100 Sobic007G206600--Sobic006G119100 Sobic002G142350 Sobic002G142350 Sobic007G206600--Sobic002G142350 Sobic007G206600--Sobic001G487250 Sobic003G276700 Sobic003G276700 Sobic007G206600--Sobic003G276700 Sobic003G096400 Sobic003G096400 Sobic007G206600--Sobic003G096400 Sobic010G011001 Sobic010G011001 Sobic007G206600--Sobic010G011001 Sobic007G206600--Sobic004G223350 Sobic001G400101 Sobic001G400101 Sobic009G020800--Sobic001G400101 Sobic009G020800--Sobic006G109850 Sobic005G204900 Sobic005G204900 Sobic009G020800--Sobic005G204900 Sobic008G096300 Sobic008G096300 Sobic009G020800--Sobic008G096300 Sobic010G150600 Sobic010G150600 Sobic009G020800--Sobic010G150600 Sobic009G188750 Sobic009G188750 Sobic009G020800--Sobic009G188750 Sobic001G490600 Sobic001G490600 Sobic009G020800--Sobic001G490600 Sobic009G184500 Sobic009G184500 Sobic009G020800--Sobic009G184500 Sobic009G020800--Sobic001G487250 Sobic010G084900--Sobic001G460150 Sobic010G084900--Sobic003G276700 Sobic010G084900--Sobic009G049100 Sobic001G296600 Sobic001G296600 Sobic010G084900--Sobic001G296600 Sobic004G070150 Sobic004G070150 Sobic010G084900--Sobic004G070150 Sobic010G084900--Sobic004G223350 Sobic009G252500 Sobic009G252500 Sobic010G084900--Sobic009G252500 Sobic010G084900--Sobic008G024700 Sobic007G046600 Sobic007G046600 Sobic010G084900--Sobic007G046600 Sobic003G239750 Sobic003G239750 Sobic006G109850--Sobic003G239750 Sobic001G062400 Sobic001G062400 Sobic006G109850--Sobic001G062400 Sobic006G109850--Sobic009G020800 Sobic005G027032 Sobic005G027032 Sobic006G109850--Sobic005G027032 Sobic006G109850--Sobic008G086100 Sobic006G103601 Sobic006G103601 Sobic006G109850--Sobic006G103601 Sobic006G109850--Sobic001G400101 Sobic004G344301 Sobic004G344301 Sobic006G109850--Sobic004G344301 Sobic007G165200 Sobic007G165200 Sobic006G109850--Sobic007G165200 Sobic004G149000 Sobic004G149000 Sobic004G081000--Sobic004G149000 Sobic002G280001 Sobic002G280001 Sobic004G081000--Sobic002G280001 Sobic007G200300 Sobic007G200300 Sobic004G081000--Sobic007G200300 Sobic001G361750 Sobic001G361750 Sobic004G081000--Sobic001G361750 Sobic003G079600 Sobic003G079600 Sobic004G081000--Sobic003G079600 Sobic009G147600 Sobic009G147600 Sobic004G081000--Sobic009G147600 Sobic001G350800 Sobic001G350800 Sobic004G081000--Sobic001G350800 Sobic002G227100 Sobic002G227100 Sobic004G081000--Sobic002G227100 Sobic010G242000 Sobic010G242000 Sobic004G081000--Sobic010G242000
Octagon: transcription factors


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