Gene annotation
Transcriptome id Sobic.010G002500.1,Sobic.010G002500.3,Sobic.010G002500.2
Synonym Sb10g000430
Functional annotation integral membrane protein, putative, expressed
UniProt A0A194YHL4 , C5Z235 , A0A1W0VQX4
Pfam -
Panther DB PTHR31851 PTHR31851:SF16
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G27870 : Vacuolar iron transporter (VIT) family protein
RAP-DB (Rice) LOC_Os06g01440.1 : integral membrane protein, putative, expressed
MaizeGDB (Corn) Zm00025a041156
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.010G002500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G368000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@annexin, putative, expressed -
2 Sobic.007G017300 endoglucanase, putative, expressed -
3 Sobic.009G004500 expressed protein -
4 Sobic.010G021401 - -
5 Sobic.001G483200 ataxin-2 C-terminal region family protein, expressed -
6 Sobic.005G155001 - -
7 Sobic.009G114900 - -
8 Sobic.007G061500 double-strand break repair protein MRE11, putative, expressed K10865: double-strand break repair protein MRE11
9 Sobic.002G314950 - -
10 Sobic.001G490600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ribosomal L18p/L5e family protein, putative, expressed -
11 Sobic.001G028500 expressed protein -
12 Sobic.001G435800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@calcium-binding EF hand family protein, putative, expressed -
13 Sobic.006G093400 potassium channel SKOR, putative, expressed -
14 Sobic.003G093500 protein binding protein, putative, expressed -
15 Sobic.004G231501 - -
16 Sobic.001G212701 - -
17 Sobic.009G184500 cysteine proteinase inhibitor precursor protein, putative, expressed -
18 Sobic.007G213500 expressed protein -
19 Sobic.002G387400 calmodulin-binding protein, putative, expressed -
20 Sobic.002G370100 proline-rich protein, putative, expressed -


Gene co-expression network
sample Sobic010G002500 Sobic010G002500 Sobic001G368000 Sobic001G368000 Sobic010G002500--Sobic001G368000 Sobic007G017300 Sobic007G017300 Sobic010G002500--Sobic007G017300 Sobic009G004500 Sobic009G004500 Sobic010G002500--Sobic009G004500 Sobic010G021401 Sobic010G021401 Sobic010G002500--Sobic010G021401 Sobic001G483200 Sobic001G483200 Sobic010G002500--Sobic001G483200 Sobic005G155001 Sobic005G155001 Sobic010G002500--Sobic005G155001 Sobic009G114900 Sobic009G114900 Sobic010G002500--Sobic009G114900 Sobic007G061500 Sobic007G061500 Sobic010G002500--Sobic007G061500 Sobic002G314950 Sobic002G314950 Sobic010G002500--Sobic002G314950 Sobic001G368000--Sobic007G017300 Sobic001G368000--Sobic009G004500 Sobic001G368000--Sobic001G483200 Sobic001G368000--Sobic007G061500 Sobic001G490600 Sobic001G490600 Sobic001G368000--Sobic001G490600 Sobic001G368000--Sobic005G155001 Sobic001G468200 Sobic001G468200 Sobic001G368000--Sobic001G468200 Sobic007G213500 Sobic007G213500 Sobic001G368000--Sobic007G213500 Sobic009G184500 Sobic009G184500 Sobic001G368000--Sobic009G184500 Sobic007G017300--Sobic001G368000 Sobic007G017300--Sobic001G483200 Sobic007G017300--Sobic009G004500 Sobic007G017300--Sobic005G155001 Sobic007G017300--Sobic007G061500 Sobic003G093500 Sobic003G093500 Sobic007G017300--Sobic003G093500 Sobic007G017300--Sobic007G213500 Sobic001G028500 Sobic001G028500 Sobic007G017300--Sobic001G028500 Sobic007G017300--Sobic001G468200 Sobic009G004500--Sobic007G017300 Sobic009G004500--Sobic001G483200 Sobic009G004500--Sobic005G155001 Sobic009G004500--Sobic001G368000 Sobic009G004500--Sobic007G061500 Sobic009G004500--Sobic001G028500 Sobic009G004500--Sobic003G093500 Sobic009G004500--Sobic010G021401 Sobic001G060200 Sobic001G060200 Sobic009G004500--Sobic001G060200 Sobic010G021401--Sobic005G155001 Sobic010G021401--Sobic009G114900 Sobic010G021401--Sobic009G004500 Sobic010G021401--Sobic001G483200 Sobic001G527900 Sobic001G527900 Sobic010G021401--Sobic001G527900 Sobic007G090406 Sobic007G090406 Sobic010G021401--Sobic007G090406 Sobic002G252700 Sobic002G252700 Sobic010G021401--Sobic002G252700 Sobic008G185000 Sobic008G185000 Sobic010G021401--Sobic008G185000 Sobic008G192800 Sobic008G192800 Sobic010G021401--Sobic008G192800 Sobic001G483200--Sobic007G017300 Sobic001G483200--Sobic005G155001 Sobic001G483200--Sobic009G004500 Sobic001G483200--Sobic001G368000 Sobic001G483200--Sobic007G061500 Sobic001G483200--Sobic007G213500 Sobic001G483200--Sobic001G527900 Sobic001G483200--Sobic001G028500 Sobic001G483200--Sobic001G468200 Sobic005G155001--Sobic001G483200 Sobic005G155001--Sobic009G114900 Sobic005G155001--Sobic009G004500 Sobic005G155001--Sobic007G017300 Sobic005G155001--Sobic010G021401 Sobic005G155001--Sobic001G527900 Sobic005G155001--Sobic001G368000 Sobic005G155001--Sobic008G185000 Sobic005G155001--Sobic007G090406 Sobic009G114900--Sobic005G155001 Sobic009G114900--Sobic010G021401 Sobic009G114900--Sobic007G090406 Sobic009G114900--Sobic002G252700 Sobic009G114900--Sobic009G004500 Sobic006G093400 Sobic006G093400 Sobic009G114900--Sobic006G093400 Sobic009G114900--Sobic008G192800 Sobic009G114900--Sobic001G527900 Sobic009G114900--Sobic001G483200 Sobic004G231501 Sobic004G231501 Sobic007G061500--Sobic004G231501 Sobic007G061500--Sobic001G028500 Sobic004G314100 Sobic004G314100 Sobic007G061500--Sobic004G314100 Sobic007G061500--Sobic009G004500 Sobic007G061500--Sobic007G017300 Sobic007G061500--Sobic001G368000 Sobic007G061500--Sobic003G093500 Sobic003G106100 Sobic003G106100 Sobic007G061500--Sobic003G106100 Sobic007G061500--Sobic001G483200 Sobic002G314950--Sobic001G527900 Sobic006G232300 Sobic006G232300 Sobic002G314950--Sobic006G232300 Sobic002G314950--Sobic005G155001 Sobic010G253700 Sobic010G253700 Sobic002G314950--Sobic010G253700 Sobic002G314950--Sobic001G483200 Sobic002G314950--Sobic006G093400 Sobic002G314950--Sobic009G114900 Sobic009G004300 Sobic009G004300 Sobic002G314950--Sobic009G004300 Sobic007G200200 Sobic007G200200 Sobic002G314950--Sobic007G200200
Octagon: transcription factors


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