Gene annotation
Transcriptome id Sobic.002G387400.1
Synonym Sb02g040370
Functional annotation calmodulin-binding protein, putative, expressed
UniProt C5X388
Pfam -
Panther DB PTHR31250 PTHR31250:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G58480 : calmodulin-binding family protein
RAP-DB (Rice) LOC_Os07g43970.1 : calmodulin-binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a006981 , Zm00025a052291 , Zm00025a043166 , Zm00025a048872 , Zm00025a028439 , Zm00025a038407
Brachypodium KQK08369 , KQK08370 , KQK15055
Barley HORVU1Hr1G028900.12 , HORVU1Hr1G028900.10 , HORVU1Hr1G028900.11 , HORVU1Hr1G045060.3 , HORVU1Hr1G045060.1 , HORVU5Hr1G120690.6 , HORVU5Hr1G120690.5 , HORVU5Hr1G120690.4 , HORVU5Hr1G120690.3 , HORVU5Hr1G120690.2 , HORVU5Hr1G093140.20 , HORVU3Hr1G010590.2 , HORVU3Hr1G010590.3 , HORVU3Hr1G010590.1 , HORVU5Hr1G093140.14 , HORVU5Hr1G093140.15 , HORVU5Hr1G093140.16 , HORVU5Hr1G093140.17 , HORVU5Hr1G093140.10 , HORVU5Hr1G093140.11 , HORVU5Hr1G093140.12 , HORVU5Hr1G093140.13 , HORVU5Hr1G093140.18 , HORVU5Hr1G093140.19 , HORVU1Hr1G028900.1 , HORVU1Hr1G028900.2 , HORVU1Hr1G028900.3 , HORVU1Hr1G028900.4 , HORVU1Hr1G028900.5 , HORVU1Hr1G028900.7 , HORVU1Hr1G028900.8 , HORVU5Hr1G110660.1 , HORVU5Hr1G110660.2 , HORVU2Hr1G015200.1 , HORVU2Hr1G015200.2 , HORVU1Hr1G045060.2 , HORVU2Hr1G028150.1 , HORVU2Hr1G028150.2 , HORVU2Hr1G028140.2 , HORVU2Hr1G028140.1 , HORVU5Hr1G093140.8 , HORVU5Hr1G093140.9 , HORVU5Hr1G093140.6 , HORVU5Hr1G093140.7 , HORVU5Hr1G093140.5 , HORVU5Hr1G093140.2 , HORVU5Hr1G093140.3 , HORVU5Hr1G093140.1
Wheat TraesCS1A02G125400 , TraesCS1A02G125400 , TraesCS5D02G385200 , TraesCS5D02G385200 , TraesCS1B02G143800 , TraesCS1B02G143800 , TraesCS2D02G160200 , TraesCS1D02G128400 , TraesCS3A02G206400 , TraesCS5B02G377900 , TraesCS2A02G154900 , TraesCS2B02G180000 , TraesCS5A02G375700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G368000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@annexin, putative, expressed -
2 Sobic.001G490600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ribosomal L18p/L5e family protein, putative, expressed -
3 Sobic.009G170301 - -
4 Sobic.008G095000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@GRAM domain containing protein, expressed -
5 Sobic.005G094500 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed -
6 Sobic.010G021401 - -
7 Sobic.007G017300 endoglucanase, putative, expressed -
8 Sobic.002G076932 - -
9 Sobic.009G184500 cysteine proteinase inhibitor precursor protein, putative, expressed -
10 Sobic.010G220100 cell cycle control protein, putative, expressed -
11 Sobic.010G002500 integral membrane protein, putative, expressed -
12 Sobic.001G435800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@calcium-binding EF hand family protein, putative, expressed -
13 Sobic.010G257300 serine esterase, putative, expressed K15889: prenylcysteine alpha-carboxyl methylesterase
14 Sobic.005G011500 peroxidase precursor, putative, expressed K00430: peroxidase
15 Sobic.001G312801 - -
16 Sobic.004G288900 protein kinase, putative, expressed -
17 Sobic.007G157200 - -
18 Sobic.002G395900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@nodulation protein-related, putative, expressed -
19 Sobic.005G155001 - -
20 Sobic.004G184500 nucleoside diphosphate kinase, putative, expressed K00940: ndk, nucleoside-diphosphate kinase


Gene co-expression network
sample Sobic002G387400 Sobic002G387400 Sobic001G368000 Sobic001G368000 Sobic002G387400--Sobic001G368000 Sobic001G490600 Sobic001G490600 Sobic002G387400--Sobic001G490600 Sobic009G170301 Sobic009G170301 Sobic002G387400--Sobic009G170301 Sobic008G095000 Sobic008G095000 Sobic002G387400--Sobic008G095000 Sobic005G094500 Sobic005G094500 Sobic002G387400--Sobic005G094500 Sobic010G021401 Sobic010G021401 Sobic002G387400--Sobic010G021401 Sobic007G017300 Sobic007G017300 Sobic002G387400--Sobic007G017300 Sobic002G076932 Sobic002G076932 Sobic002G387400--Sobic002G076932 Sobic009G184500 Sobic009G184500 Sobic002G387400--Sobic009G184500 Sobic001G368000--Sobic007G017300 Sobic009G004500 Sobic009G004500 Sobic001G368000--Sobic009G004500 Sobic001G483200 Sobic001G483200 Sobic001G368000--Sobic001G483200 Sobic007G061500 Sobic007G061500 Sobic001G368000--Sobic007G061500 Sobic001G368000--Sobic001G490600 Sobic005G155001 Sobic005G155001 Sobic001G368000--Sobic005G155001 Sobic001G468200 Sobic001G468200 Sobic001G368000--Sobic001G468200 Sobic007G213500 Sobic007G213500 Sobic001G368000--Sobic007G213500 Sobic001G368000--Sobic009G184500 Sobic001G490600--Sobic009G184500 Sobic001G490600--Sobic001G368000 Sobic001G490600--Sobic007G017300 Sobic001G490600--Sobic009G004500 Sobic001G312801 Sobic001G312801 Sobic001G490600--Sobic001G312801 Sobic008G185000 Sobic008G185000 Sobic001G490600--Sobic008G185000 Sobic001G490600--Sobic009G170301 Sobic001G490600--Sobic001G483200 Sobic001G490600--Sobic005G155001 Sobic009G170301--Sobic002G076932 Sobic009G170301--Sobic005G094500 Sobic010G041500 Sobic010G041500 Sobic009G170301--Sobic010G041500 Sobic009G170301--Sobic001G368000 Sobic003G202900 Sobic003G202900 Sobic009G170301--Sobic003G202900 Sobic002G395900 Sobic002G395900 Sobic009G170301--Sobic002G395900 Sobic009G170301--Sobic001G468200 Sobic009G170301--Sobic001G490600 Sobic009G170301--Sobic007G017300 Sobic008G095000--Sobic002G387400 Sobic001G435800 Sobic001G435800 Sobic008G095000--Sobic001G435800 Sobic010G220100 Sobic010G220100 Sobic008G095000--Sobic010G220100 Sobic008G095000--Sobic010G021401 Sobic009G114900 Sobic009G114900 Sobic008G095000--Sobic009G114900 Sobic008G192800 Sobic008G192800 Sobic008G095000--Sobic008G192800 Sobic008G095000--Sobic009G004500 Sobic003G093500 Sobic003G093500 Sobic008G095000--Sobic003G093500 Sobic009G072400 Sobic009G072400 Sobic008G095000--Sobic009G072400 Sobic005G094500--Sobic002G395900 Sobic004G184500 Sobic004G184500 Sobic005G094500--Sobic004G184500 Sobic005G094500--Sobic003G202900 Sobic003G155350 Sobic003G155350 Sobic005G094500--Sobic003G155350 Sobic005G094500--Sobic002G076932 Sobic005G094500--Sobic009G170301 Sobic001G176800 Sobic001G176800 Sobic005G094500--Sobic001G176800 Sobic008G166250 Sobic008G166250 Sobic005G094500--Sobic008G166250 Sobic005G094500--Sobic007G017300 Sobic010G021401--Sobic005G155001 Sobic010G021401--Sobic009G114900 Sobic010G021401--Sobic009G004500 Sobic010G021401--Sobic001G483200 Sobic001G527900 Sobic001G527900 Sobic010G021401--Sobic001G527900 Sobic007G090406 Sobic007G090406 Sobic010G021401--Sobic007G090406 Sobic002G252700 Sobic002G252700 Sobic010G021401--Sobic002G252700 Sobic010G021401--Sobic008G185000 Sobic010G021401--Sobic008G192800 Sobic007G017300--Sobic001G368000 Sobic007G017300--Sobic001G483200 Sobic007G017300--Sobic009G004500 Sobic007G017300--Sobic005G155001 Sobic007G017300--Sobic007G061500 Sobic007G017300--Sobic003G093500 Sobic007G017300--Sobic007G213500 Sobic001G028500 Sobic001G028500 Sobic007G017300--Sobic001G028500 Sobic007G017300--Sobic001G468200 Sobic002G076932--Sobic009G170301 Sobic002G076932--Sobic005G094500 Sobic001G204200 Sobic001G204200 Sobic002G076932--Sobic001G204200 Sobic008G054400 Sobic008G054400 Sobic002G076932--Sobic008G054400 Sobic002G076932--Sobic010G041500 Sobic002G076932--Sobic008G166250 Sobic002G076932--Sobic004G184500 Sobic002G076932--Sobic003G202900 Sobic001G212701 Sobic001G212701 Sobic002G076932--Sobic001G212701 Sobic009G184500--Sobic001G490600 Sobic009G184500--Sobic007G017300 Sobic009G184500--Sobic001G368000 Sobic009G184500--Sobic009G004500 Sobic004G288900 Sobic004G288900 Sobic009G184500--Sobic004G288900 Sobic002G360701 Sobic002G360701 Sobic009G184500--Sobic002G360701 Sobic010G150600 Sobic010G150600 Sobic009G184500--Sobic010G150600 Sobic009G184500--Sobic001G483200 Sobic009G184500--Sobic005G155001
Octagon: transcription factors


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