Gene annotation
Transcriptome id Sobic.002G370100.1
Synonym Sb02g038890
Functional annotation proline-rich protein, putative, expressed
UniProt A0A1B6QFI9
Pfam -
Panther DB PTHR22814 PTHR22814:SF128
NCBI CDD KOG1603; Copper chaperone
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G16380 : Heavy metal transport/detoxification superfamily protein
RAP-DB (Rice) LOC_Os07g41600.1 : proline-rich protein, putative, expressed
MaizeGDB (Corn) Zm00025a048713
Brachypodium KQK15316
Barley HORVU2Hr1G032280.3 , HORVU2Hr1G032280.2 , HORVU2Hr1G032280.1
Wheat TraesCS2B02G199600 , TraesCS2D02G180500
Populus -


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cDNA sequences
Sobic.002G370100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G040500 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed K03004: DNA-directed RNA polymerase I subunit RPA43
2 Sobic.003G400332 - -
3 Sobic.002G314950 - -
4 Sobic.007G200200 lectin protein kinase family protein, putative, expressed -
5 Sobic.010G002500 integral membrane protein, putative, expressed -
6 Sobic.006G053000 heavy metal-associated domain containing protein, expressed -
7 Sobic.010G155901 - -
8 Sobic.001G309000 glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
9 Sobic.002G271900 EAP30/Vps36 family domain containing protein, expressed K12188: SNF8, ESCRT-II complex subunit VPS22
10 Sobic.006G229600 serine/threonine-protein kinase receptor precursor, putative, expressed -
11 Sobic.001G435800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@calcium-binding EF hand family protein, putative, expressed -
12 Sobic.009G072400 ABC transporter, ATP-binding protein, putative, expressed -
13 Sobic.010G253700 - -
14 Sobic.001G139750 - -
15 Sobic.006G058300 expressed protein -
16 Sobic.010G257300 serine esterase, putative, expressed K15889: prenylcysteine alpha-carboxyl methylesterase
17 Sobic.010G132300 CDK5RAP3, putative, expressed -
18 Sobic.004G012100 basic helix-loop-helix DND-binding domain containing protein, expressed -
19 Sobic.009G200100 GDSL-like lipase/acylhydrolase, putative, expressed -
20 Sobic.006G110600 - -


Gene co-expression network
sample Sobic002G370100 Sobic002G370100 Sobic003G040500 Sobic003G040500 Sobic002G370100--Sobic003G040500 Sobic003G400332 Sobic003G400332 Sobic002G370100--Sobic003G400332 Sobic002G314950 Sobic002G314950 Sobic002G370100--Sobic002G314950 Sobic007G200200 Sobic007G200200 Sobic002G370100--Sobic007G200200 Sobic010G002500 Sobic010G002500 Sobic002G370100--Sobic010G002500 Sobic006G053000 Sobic006G053000 Sobic002G370100--Sobic006G053000 Sobic010G155901 Sobic010G155901 Sobic002G370100--Sobic010G155901 Sobic001G309000 Sobic001G309000 Sobic002G370100--Sobic001G309000 Sobic002G271900 Sobic002G271900 Sobic002G370100--Sobic002G271900 Sobic003G040500--Sobic002G370100 Sobic003G040500--Sobic001G309000 Sobic003G149900 Sobic003G149900 Sobic003G040500--Sobic003G149900 Sobic006G037000 Sobic006G037000 Sobic003G040500--Sobic006G037000 Sobic003G279600 Sobic003G279600 Sobic003G040500--Sobic003G279600 Sobic002G326200 Sobic002G326200 Sobic003G040500--Sobic002G326200 Sobic001G523300 Sobic001G523300 Sobic003G040500--Sobic001G523300 Sobic003G040500--Sobic010G155901 Sobic006G110600 Sobic006G110600 Sobic003G040500--Sobic006G110600 Sobic003G400332--Sobic010G155901 Sobic001G139750 Sobic001G139750 Sobic003G400332--Sobic001G139750 Sobic006G058300 Sobic006G058300 Sobic003G400332--Sobic006G058300 Sobic002G373200 Sobic002G373200 Sobic003G400332--Sobic002G373200 Sobic005G076100 Sobic005G076100 Sobic003G400332--Sobic005G076100 Sobic003G400332--Sobic003G149900 Sobic001G407000 Sobic001G407000 Sobic003G400332--Sobic001G407000 Sobic010G132300 Sobic010G132300 Sobic003G400332--Sobic010G132300 Sobic001G541900 Sobic001G541900 Sobic003G400332--Sobic001G541900 Sobic001G527900 Sobic001G527900 Sobic002G314950--Sobic001G527900 Sobic006G232300 Sobic006G232300 Sobic002G314950--Sobic006G232300 Sobic005G155001 Sobic005G155001 Sobic002G314950--Sobic005G155001 Sobic010G253700 Sobic010G253700 Sobic002G314950--Sobic010G253700 Sobic001G483200 Sobic001G483200 Sobic002G314950--Sobic001G483200 Sobic006G093400 Sobic006G093400 Sobic002G314950--Sobic006G093400 Sobic009G114900 Sobic009G114900 Sobic002G314950--Sobic009G114900 Sobic009G004300 Sobic009G004300 Sobic002G314950--Sobic009G004300 Sobic002G314950--Sobic007G200200 Sobic001G456650 Sobic001G456650 Sobic007G200200--Sobic001G456650 Sobic001G068901 Sobic001G068901 Sobic007G200200--Sobic001G068901 Sobic006G229600 Sobic006G229600 Sobic007G200200--Sobic006G229600 Sobic001G061000 Sobic001G061000 Sobic007G200200--Sobic001G061000 Sobic003G235601 Sobic003G235601 Sobic007G200200--Sobic003G235601 Sobic009G072400 Sobic009G072400 Sobic007G200200--Sobic009G072400 Sobic007G200200--Sobic002G314950 Sobic007G200200--Sobic006G232300 Sobic007G200200--Sobic002G271900 Sobic001G368000 Sobic001G368000 Sobic010G002500--Sobic001G368000 Sobic007G017300 Sobic007G017300 Sobic010G002500--Sobic007G017300 Sobic009G004500 Sobic009G004500 Sobic010G002500--Sobic009G004500 Sobic010G021401 Sobic010G021401 Sobic010G002500--Sobic010G021401 Sobic010G002500--Sobic001G483200 Sobic010G002500--Sobic005G155001 Sobic010G002500--Sobic009G114900 Sobic007G061500 Sobic007G061500 Sobic010G002500--Sobic007G061500 Sobic010G002500--Sobic002G314950 Sobic006G053000--Sobic006G229600 Sobic006G053000--Sobic002G271900 Sobic003G230300 Sobic003G230300 Sobic006G053000--Sobic003G230300 Sobic006G053000--Sobic010G155901 Sobic006G053000--Sobic006G058300 Sobic006G053000--Sobic003G400332 Sobic006G069050 Sobic006G069050 Sobic006G053000--Sobic006G069050 Sobic006G053000--Sobic003G149900 Sobic006G053000--Sobic006G110600 Sobic010G155901--Sobic003G400332 Sobic010G155901--Sobic006G058300 Sobic010G155901--Sobic001G407000 Sobic010G155901--Sobic010G132300 Sobic008G020300 Sobic008G020300 Sobic010G155901--Sobic008G020300 Sobic010G155901--Sobic003G149900 Sobic010G155901--Sobic001G139750 Sobic010G155901--Sobic001G541900 Sobic003G105300 Sobic003G105300 Sobic010G155901--Sobic003G105300 Sobic001G309000--Sobic003G279600 Sobic004G160950 Sobic004G160950 Sobic001G309000--Sobic004G160950 Sobic008G096150 Sobic008G096150 Sobic001G309000--Sobic008G096150 Sobic001G212701 Sobic001G212701 Sobic001G309000--Sobic001G212701 Sobic007G174100 Sobic007G174100 Sobic001G309000--Sobic007G174100 Sobic003G178400 Sobic003G178400 Sobic001G309000--Sobic003G178400 Sobic001G309000--Sobic010G132300 Sobic010G055600 Sobic010G055600 Sobic001G309000--Sobic010G055600 Sobic001G309000--Sobic006G110600 Sobic002G271900--Sobic006G229600 Sobic002G271900--Sobic009G004300 Sobic002G271900--Sobic002G326200 Sobic002G133600 Sobic002G133600 Sobic002G271900--Sobic002G133600 Sobic002G271900--Sobic006G110600 Sobic002G271900--Sobic006G058300 Sobic004G012100 Sobic004G012100 Sobic002G271900--Sobic004G012100 Sobic002G271900--Sobic010G155901 Sobic009G258150 Sobic009G258150 Sobic002G271900--Sobic009G258150
Octagon: transcription factors


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