Gene annotation
Transcriptome id Sobic.009G072400.1
Synonym MRP6, Sb09g006080, ATMRP6
Functional annotation ABC transporter, ATP-binding protein, putative, expressed
UniProt C5YUD8
Pfam PF00664 PF00005
Panther DB PTHR24223 PTHR24223:SF108
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0006810transport GO:0005524ATP binding GO:0016887ATPase activity


Orthologs (automatic annotation)
TAIR AT3G21250 : multidrug resistance-associated protein 6
RAP-DB (Rice) LOC_Os05g10730.2 : ABC transporter, ATP-binding protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium PNT71649 , PNT71650 , KQK07122 , KQK07121
Barley HORVU3Hr1G022850.19 , HORVU3Hr1G022850.14 , HORVU3Hr1G022850.15 , HORVU3Hr1G022850.16 , HORVU3Hr1G022850.17 , HORVU3Hr1G022850.10 , HORVU3Hr1G022850.11 , HORVU3Hr1G022850.12 , HORVU3Hr1G022850.13 , HORVU3Hr1G022850.21 , HORVU3Hr1G022850.20 , HORVU3Hr1G022850.23 , HORVU3Hr1G022850.25 , HORVU3Hr1G022850.27 , HORVU3Hr1G022850.26 , HORVU3Hr1G022850.29 , HORVU3Hr1G022850.28 , HORVU3Hr1G022850.30 , HORVU3Hr1G022850.31 , HORVU3Hr1G022850.2 , HORVU3Hr1G022850.8 , HORVU3Hr1G022850.9 , HORVU3Hr1G022850.7 , HORVU3Hr1G022850.4 , HORVU3Hr1G022850.5 , HORVU3Hr1G022850.3 , HORVU3Hr1G022850.6
Wheat TraesCS3D02G124700 , TraesCS3D02G124700 , TraesCS3A02G123000 , TraesCS3B02G142200 , TraesCS3B02G142200 , TraesCS3B02G142200
Populus -


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cDNA sequences
Sobic.009G072400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G068901 - -
2 Sobic.010G257300 serine esterase, putative, expressed K15889: prenylcysteine alpha-carboxyl methylesterase
3 Sobic.006G093400 potassium channel SKOR, putative, expressed -
4 Sobic.004G012100 basic helix-loop-helix DND-binding domain containing protein, expressed -
5 Sobic.001G537600 expressed protein -
6 Sobic.010G242100 cytochrome P450 domain containing protein, expressed -
7 Sobic.008G096900 protein of unknown function DUF502 domain containing protein, expressed -
8 Sobic.010G253700 - -
9 Sobic.001G435800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@calcium-binding EF hand family protein, putative, expressed -
10 Sobic.010G021401 - -
11 Sobic.006G037000 - -
12 Sobic.010G106400 - -
13 Sobic.009G114900 - -
14 Sobic.002G252700 vignain precursor, putative, expressed -
15 Sobic.007G200200 lectin protein kinase family protein, putative, expressed -
16 Sobic.009G258150 - -
17 Sobic.005G155001 - -
18 Sobic.001G308450 - -
19 Sobic.001G456650 - K13066: E2.1.1.68, caffeic acid 3-O-methyltransferase
20 Sobic.002G326200 TKL_IRAK_DUF26-la.4 - DUF26 kinases have homology to DUF26 containing loci, expressed -


Gene co-expression network
sample Sobic009G072400 Sobic009G072400 Sobic001G068901 Sobic001G068901 Sobic009G072400--Sobic001G068901 Sobic010G257300 Sobic010G257300 Sobic009G072400--Sobic010G257300 Sobic006G093400 Sobic006G093400 Sobic009G072400--Sobic006G093400 Sobic004G012100 Sobic004G012100 Sobic009G072400--Sobic004G012100 Sobic001G537600 Sobic001G537600 Sobic009G072400--Sobic001G537600 Sobic010G242100 Sobic010G242100 Sobic009G072400--Sobic010G242100 Sobic008G096900 Sobic008G096900 Sobic009G072400--Sobic008G096900 Sobic010G253700 Sobic010G253700 Sobic009G072400--Sobic010G253700 Sobic001G435800 Sobic001G435800 Sobic009G072400--Sobic001G435800 Sobic001G068901--Sobic001G537600 Sobic001G068901--Sobic010G242100 Sobic001G068901--Sobic006G093400 Sobic001G068901--Sobic009G072400 Sobic001G068901--Sobic010G257300 Sobic001G068901--Sobic010G253700 Sobic001G068901--Sobic004G012100 Sobic010G106400 Sobic010G106400 Sobic001G068901--Sobic010G106400 Sobic001G308450 Sobic001G308450 Sobic001G068901--Sobic001G308450 Sobic010G257300--Sobic006G093400 Sobic010G257300--Sobic004G012100 Sobic009G258150 Sobic009G258150 Sobic010G257300--Sobic009G258150 Sobic010G257300--Sobic001G068901 Sobic010G257300--Sobic010G253700 Sobic010G257300--Sobic001G537600 Sobic010G257300--Sobic009G072400 Sobic010G257300--Sobic008G096900 Sobic003G379500 Sobic003G379500 Sobic010G257300--Sobic003G379500 Sobic006G093400--Sobic010G257300 Sobic006G093400--Sobic001G068901 Sobic006G232300 Sobic006G232300 Sobic006G093400--Sobic006G232300 Sobic009G114900 Sobic009G114900 Sobic006G093400--Sobic009G114900 Sobic006G093400--Sobic010G253700 Sobic006G093400--Sobic004G012100 Sobic005G155001 Sobic005G155001 Sobic006G093400--Sobic005G155001 Sobic001G483200 Sobic001G483200 Sobic006G093400--Sobic001G483200 Sobic006G093400--Sobic001G537600 Sobic004G012100--Sobic010G253700 Sobic004G012100--Sobic010G257300 Sobic004G012100--Sobic010G242100 Sobic004G012100--Sobic001G068901 Sobic004G012100--Sobic001G537600 Sobic004G012100--Sobic009G258150 Sobic004G012100--Sobic003G379500 Sobic006G229600 Sobic006G229600 Sobic004G012100--Sobic006G229600 Sobic004G012100--Sobic006G093400 Sobic001G537600--Sobic010G106400 Sobic001G537600--Sobic001G068901 Sobic006G146400 Sobic006G146400 Sobic001G537600--Sobic006G146400 Sobic009G238200 Sobic009G238200 Sobic001G537600--Sobic009G238200 Sobic006G280900 Sobic006G280900 Sobic001G537600--Sobic006G280900 Sobic006G065200 Sobic006G065200 Sobic001G537600--Sobic006G065200 Sobic001G537600--Sobic010G257300 Sobic001G537600--Sobic004G012100 Sobic006G103601 Sobic006G103601 Sobic001G537600--Sobic006G103601 Sobic010G242100--Sobic001G068901 Sobic010G242100--Sobic010G253700 Sobic010G242100--Sobic004G012100 Sobic010G242100--Sobic001G537600 Sobic010G197400 Sobic010G197400 Sobic010G242100--Sobic010G197400 Sobic010G242100--Sobic010G257300 Sobic010G242100--Sobic009G072400 Sobic010G242100--Sobic010G106400 Sobic009G225300 Sobic009G225300 Sobic010G242100--Sobic009G225300 Sobic006G037000 Sobic006G037000 Sobic008G096900--Sobic006G037000 Sobic007G174100 Sobic007G174100 Sobic008G096900--Sobic007G174100 Sobic008G096900--Sobic010G257300 Sobic008G096900--Sobic001G537600 Sobic005G076100 Sobic005G076100 Sobic008G096900--Sobic005G076100 Sobic008G096900--Sobic004G012100 Sobic008G096900--Sobic010G253700 Sobic009G031300 Sobic009G031300 Sobic008G096900--Sobic009G031300 Sobic002G326200 Sobic002G326200 Sobic008G096900--Sobic002G326200 Sobic010G253700--Sobic004G012100 Sobic010G253700--Sobic010G242100 Sobic010G253700--Sobic001G068901 Sobic010G253700--Sobic010G257300 Sobic010G253700--Sobic001G537600 Sobic010G253700--Sobic006G093400 Sobic010G253700--Sobic008G096900 Sobic010G253700--Sobic010G106400 Sobic010G253700--Sobic009G114900 Sobic010G021401 Sobic010G021401 Sobic001G435800--Sobic010G021401 Sobic001G435800--Sobic009G072400 Sobic001G435800--Sobic009G114900 Sobic001G435800--Sobic005G155001 Sobic002G314950 Sobic002G314950 Sobic001G435800--Sobic002G314950 Sobic001G435800--Sobic008G096900 Sobic008G185000 Sobic008G185000 Sobic001G435800--Sobic008G185000 Sobic001G435800--Sobic010G257300 Sobic010G220100 Sobic010G220100 Sobic001G435800--Sobic010G220100
Octagon: transcription factors


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