Gene annotation
Transcriptome id Sobic.008G096900.1
Synonym COV1, Sb08g014620
Functional annotation protein of unknown function DUF502 domain containing protein, expressed
UniProt C5YNP5
Pfam PF04367
Panther DB PTHR31876 PTHR31876:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G18460 : like COV 3
RAP-DB (Rice) LOC_Os12g29750.1 : protein of unknown function DUF502 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a054119
Brachypodium PNT62710
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G037000 - -
2 Sobic.007G174100 carrier, putative, expressed -
3 Sobic.010G257300 serine esterase, putative, expressed K15889: prenylcysteine alpha-carboxyl methylesterase
4 Sobic.001G537600 expressed protein -
5 Sobic.005G076100 rp3 protein, putative, expressed -
6 Sobic.004G012100 basic helix-loop-helix DND-binding domain containing protein, expressed -
7 Sobic.010G253700 - -
8 Sobic.009G031300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide containing protein, putative, expressed -
9 Sobic.002G326200 TKL_IRAK_DUF26-la.4 - DUF26 kinases have homology to DUF26 containing loci, expressed -
10 Sobic.006G146400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
11 Sobic.009G238200 transcription factor(PubMedID : 30367619)@WRKY19, expressed -
12 Sobic.009G114900 - -
13 Sobic.007G090406 - -
14 Sobic.009G072400 ABC transporter, ATP-binding protein, putative, expressed -
15 Sobic.003G379500 gibberellin 20 oxidase 2, putative, expressed -
16 Sobic.001G068901 - -
17 Sobic.001G115900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
18 Sobic.002G252700 vignain precursor, putative, expressed -
19 Sobic.003G149900 PPR repeat domain containing protein, putative, expressed -
20 Sobic.009G039300 short-chain dehydrogenase/reductase, putative, expressed -


Gene co-expression network
sample Sobic008G096900 Sobic008G096900 Sobic006G037000 Sobic006G037000 Sobic008G096900--Sobic006G037000 Sobic007G174100 Sobic007G174100 Sobic008G096900--Sobic007G174100 Sobic010G257300 Sobic010G257300 Sobic008G096900--Sobic010G257300 Sobic001G537600 Sobic001G537600 Sobic008G096900--Sobic001G537600 Sobic005G076100 Sobic005G076100 Sobic008G096900--Sobic005G076100 Sobic004G012100 Sobic004G012100 Sobic008G096900--Sobic004G012100 Sobic010G253700 Sobic010G253700 Sobic008G096900--Sobic010G253700 Sobic009G031300 Sobic009G031300 Sobic008G096900--Sobic009G031300 Sobic002G326200 Sobic002G326200 Sobic008G096900--Sobic002G326200 Sobic006G037000--Sobic009G031300 Sobic003G149900 Sobic003G149900 Sobic006G037000--Sobic003G149900 Sobic001G115900 Sobic001G115900 Sobic006G037000--Sobic001G115900 Sobic006G037000--Sobic008G096900 Sobic009G238200 Sobic009G238200 Sobic006G037000--Sobic009G238200 Sobic006G037000--Sobic007G174100 Sobic009G258150 Sobic009G258150 Sobic006G037000--Sobic009G258150 Sobic010G200800 Sobic010G200800 Sobic006G037000--Sobic010G200800 Sobic006G069050 Sobic006G069050 Sobic006G037000--Sobic006G069050 Sobic007G174100--Sobic005G076100 Sobic010G132300 Sobic010G132300 Sobic007G174100--Sobic010G132300 Sobic007G174100--Sobic003G149900 Sobic007G174100--Sobic002G326200 Sobic004G160950 Sobic004G160950 Sobic007G174100--Sobic004G160950 Sobic008G096150 Sobic008G096150 Sobic007G174100--Sobic008G096150 Sobic006G058300 Sobic006G058300 Sobic007G174100--Sobic006G058300 Sobic007G174100--Sobic008G096900 Sobic003G008850 Sobic003G008850 Sobic007G174100--Sobic003G008850 Sobic006G093400 Sobic006G093400 Sobic010G257300--Sobic006G093400 Sobic010G257300--Sobic004G012100 Sobic010G257300--Sobic009G258150 Sobic001G068901 Sobic001G068901 Sobic010G257300--Sobic001G068901 Sobic010G257300--Sobic010G253700 Sobic010G257300--Sobic001G537600 Sobic009G072400 Sobic009G072400 Sobic010G257300--Sobic009G072400 Sobic010G257300--Sobic008G096900 Sobic003G379500 Sobic003G379500 Sobic010G257300--Sobic003G379500 Sobic010G106400 Sobic010G106400 Sobic001G537600--Sobic010G106400 Sobic001G537600--Sobic001G068901 Sobic006G146400 Sobic006G146400 Sobic001G537600--Sobic006G146400 Sobic001G537600--Sobic009G238200 Sobic006G280900 Sobic006G280900 Sobic001G537600--Sobic006G280900 Sobic006G065200 Sobic006G065200 Sobic001G537600--Sobic006G065200 Sobic001G537600--Sobic010G257300 Sobic001G537600--Sobic004G012100 Sobic006G103601 Sobic006G103601 Sobic001G537600--Sobic006G103601 Sobic009G082400 Sobic009G082400 Sobic005G076100--Sobic009G082400 Sobic004G016600 Sobic004G016600 Sobic005G076100--Sobic004G016600 Sobic001G537900 Sobic001G537900 Sobic005G076100--Sobic001G537900 Sobic005G076100--Sobic003G008850 Sobic005G076100--Sobic007G174100 Sobic004G354800 Sobic004G354800 Sobic005G076100--Sobic004G354800 Sobic002G165401 Sobic002G165401 Sobic005G076100--Sobic002G165401 Sobic005G076100--Sobic003G149900 Sobic005G076100--Sobic006G058300 Sobic004G012100--Sobic010G253700 Sobic004G012100--Sobic010G257300 Sobic010G242100 Sobic010G242100 Sobic004G012100--Sobic010G242100 Sobic004G012100--Sobic001G068901 Sobic004G012100--Sobic001G537600 Sobic004G012100--Sobic009G258150 Sobic004G012100--Sobic003G379500 Sobic006G229600 Sobic006G229600 Sobic004G012100--Sobic006G229600 Sobic004G012100--Sobic006G093400 Sobic010G253700--Sobic004G012100 Sobic010G253700--Sobic010G242100 Sobic010G253700--Sobic001G068901 Sobic010G253700--Sobic010G257300 Sobic010G253700--Sobic001G537600 Sobic010G253700--Sobic006G093400 Sobic010G253700--Sobic008G096900 Sobic010G253700--Sobic010G106400 Sobic009G114900 Sobic009G114900 Sobic010G253700--Sobic009G114900 Sobic009G031300--Sobic006G037000 Sobic002G396900 Sobic002G396900 Sobic009G031300--Sobic002G396900 Sobic009G031300--Sobic010G200800 Sobic009G031300--Sobic003G149900 Sobic009G031300--Sobic007G174100 Sobic009G031300--Sobic008G096900 Sobic009G031300--Sobic005G076100 Sobic001G523300 Sobic001G523300 Sobic009G031300--Sobic001G523300 Sobic009G031300--Sobic001G115900 Sobic002G326200--Sobic007G174100 Sobic002G326200--Sobic010G200800 Sobic002G326200--Sobic005G076100 Sobic002G326200--Sobic003G149900 Sobic002G326200--Sobic006G058300 Sobic002G326200--Sobic003G008850 Sobic002G326200--Sobic010G257300 Sobic002G326200--Sobic001G115900 Sobic002G326200--Sobic009G258150
Octagon: transcription factors


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