Gene annotation
Transcriptome id Sobic.009G039300.1
Synonym Sb09g003320
Functional annotation short-chain dehydrogenase/reductase, putative, expressed
UniProt C5YZP2
Pfam PF00106
Panther DB PTHR24322:SF358 PTHR24322
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008152; metabolic process GO:0016491oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT3G61220 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os04g44980.1 : short-chain dehydrogenase/reductase, putative, expressed
MaizeGDB (Corn) Zm00025a016492
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G344450 - K02998: RP-SAe, small subunit ribosomal protein SAe
2 Sobic.005G002500 beta,beta-carotene 9,10-dioxygenase, putative, expressed K17913: carlactone synthase / all-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase
3 Sobic.008G096900 protein of unknown function DUF502 domain containing protein, expressed -
4 Sobic.006G280900 zinc finger, C3HC4 type domain containing protein, expressed -
5 Sobic.002G116300 poly synthetase 1, putative, expressed K10798: poly [ADP-ribose] polymerase 2/3/4
6 Sobic.001G541166 - -
7 Sobic.009G238200 transcription factor(PubMedID : 30367619)@WRKY19, expressed -
8 Sobic.004G302400 NAC domain containing protein, putative, expressed -
9 Sobic.006G146400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
10 Sobic.001G537600 expressed protein -
11 Sobic.005G091400 - -
12 Sobic.006G222650 - -
13 Sobic.010G035300 WRKY73, expressed -
14 Sobic.010G106400 - -
15 Sobic.009G083100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.006G162300 expressed protein -
17 Sobic.009G114900 - -
18 Sobic.004G032500 membrane associated DUF588 domain containing protein, putative, expressed -
19 Sobic.001G096800 uncharacterized UPF0114 domain containing protein, expressed -
20 Sobic.009G236000 GATA zinc finger domain containing protein, expressed -


Gene co-expression network
sample Sobic009G039300 Sobic009G039300 Sobic001G344450 Sobic001G344450 Sobic009G039300--Sobic001G344450 Sobic005G002500 Sobic005G002500 Sobic009G039300--Sobic005G002500 Sobic008G096900 Sobic008G096900 Sobic009G039300--Sobic008G096900 Sobic006G280900 Sobic006G280900 Sobic009G039300--Sobic006G280900 Sobic002G116300 Sobic002G116300 Sobic009G039300--Sobic002G116300 Sobic001G541166 Sobic001G541166 Sobic009G039300--Sobic001G541166 Sobic009G238200 Sobic009G238200 Sobic009G039300--Sobic009G238200 Sobic004G302400 Sobic004G302400 Sobic009G039300--Sobic004G302400 Sobic006G146400 Sobic006G146400 Sobic009G039300--Sobic006G146400 Sobic008G120066 Sobic008G120066 Sobic001G344450--Sobic008G120066 Sobic001G344450--Sobic009G039300 Sobic001G096800 Sobic001G096800 Sobic001G344450--Sobic001G096800 Sobic001G344450--Sobic005G002500 Sobic001G163000 Sobic001G163000 Sobic001G344450--Sobic001G163000 Sobic001G501500 Sobic001G501500 Sobic001G344450--Sobic001G501500 Sobic009G114900 Sobic009G114900 Sobic001G344450--Sobic009G114900 Sobic009G236000 Sobic009G236000 Sobic001G344450--Sobic009G236000 Sobic008G192800 Sobic008G192800 Sobic001G344450--Sobic008G192800 Sobic005G002500--Sobic009G039300 Sobic001G537600 Sobic001G537600 Sobic005G002500--Sobic001G537600 Sobic005G002500--Sobic006G280900 Sobic005G002500--Sobic006G146400 Sobic005G002500--Sobic009G238200 Sobic006G065200 Sobic006G065200 Sobic005G002500--Sobic006G065200 Sobic010G106400 Sobic010G106400 Sobic005G002500--Sobic010G106400 Sobic005G002500--Sobic001G344450 Sobic005G002500--Sobic004G302400 Sobic006G037000 Sobic006G037000 Sobic008G096900--Sobic006G037000 Sobic007G174100 Sobic007G174100 Sobic008G096900--Sobic007G174100 Sobic010G257300 Sobic010G257300 Sobic008G096900--Sobic010G257300 Sobic008G096900--Sobic001G537600 Sobic005G076100 Sobic005G076100 Sobic008G096900--Sobic005G076100 Sobic004G012100 Sobic004G012100 Sobic008G096900--Sobic004G012100 Sobic010G253700 Sobic010G253700 Sobic008G096900--Sobic010G253700 Sobic009G031300 Sobic009G031300 Sobic008G096900--Sobic009G031300 Sobic002G326200 Sobic002G326200 Sobic008G096900--Sobic002G326200 Sobic006G280900--Sobic006G146400 Sobic006G222650 Sobic006G222650 Sobic006G280900--Sobic006G222650 Sobic006G280900--Sobic004G302400 Sobic006G280900--Sobic001G537600 Sobic009G083100 Sobic009G083100 Sobic006G280900--Sobic009G083100 Sobic006G280900--Sobic009G238200 Sobic006G280900--Sobic002G116300 Sobic006G280900--Sobic010G106400 Sobic010G035300 Sobic010G035300 Sobic006G280900--Sobic010G035300 Sobic002G116300--Sobic010G035300 Sobic002G116300--Sobic004G302400 Sobic002G116300--Sobic006G222650 Sobic002G116300--Sobic009G238200 Sobic002G116300--Sobic006G146400 Sobic008G119000 Sobic008G119000 Sobic002G116300--Sobic008G119000 Sobic006G222800 Sobic006G222800 Sobic002G116300--Sobic006G222800 Sobic002G247100 Sobic002G247100 Sobic002G116300--Sobic002G247100 Sobic009G174600 Sobic009G174600 Sobic002G116300--Sobic009G174600 Sobic005G091400 Sobic005G091400 Sobic001G541166--Sobic005G091400 Sobic006G162300 Sobic006G162300 Sobic001G541166--Sobic006G162300 Sobic004G302550 Sobic004G302550 Sobic001G541166--Sobic004G302550 Sobic004G211501 Sobic004G211501 Sobic001G541166--Sobic004G211501 Sobic001G541166--Sobic004G302400 Sobic001G541166--Sobic006G222650 Sobic003G385800 Sobic003G385800 Sobic001G541166--Sobic003G385800 Sobic008G152100 Sobic008G152100 Sobic001G541166--Sobic008G152100 Sobic001G541166--Sobic010G035300 Sobic009G238200--Sobic002G116300 Sobic001G115900 Sobic001G115900 Sobic009G238200--Sobic001G115900 Sobic003G167825 Sobic003G167825 Sobic009G238200--Sobic003G167825 Sobic006G103601 Sobic006G103601 Sobic009G238200--Sobic006G103601 Sobic006G069050 Sobic006G069050 Sobic009G238200--Sobic006G069050 Sobic009G258150 Sobic009G258150 Sobic009G238200--Sobic009G258150 Sobic009G238200--Sobic006G146400 Sobic009G085600 Sobic009G085600 Sobic009G238200--Sobic009G085600 Sobic003G126400 Sobic003G126400 Sobic009G238200--Sobic003G126400 Sobic004G302400--Sobic006G222650 Sobic004G302400--Sobic009G174600 Sobic004G302400--Sobic010G035300 Sobic004G302400--Sobic002G116300 Sobic004G302400--Sobic006G162300 Sobic002G065300 Sobic002G065300 Sobic004G302400--Sobic002G065300 Sobic004G302400--Sobic009G238200 Sobic004G302400--Sobic006G146400 Sobic004G302400--Sobic006G280900 Sobic006G146400--Sobic006G280900 Sobic006G146400--Sobic006G222650 Sobic006G146400--Sobic002G116300 Sobic006G146400--Sobic009G238200 Sobic006G146400--Sobic001G537600 Sobic006G146400--Sobic004G302400 Sobic006G146400--Sobic010G035300 Sobic006G146400--Sobic006G103601 Sobic003G379500 Sobic003G379500 Sobic006G146400--Sobic003G379500
Octagon: transcription factors


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