Gene annotation
Transcriptome id Sobic.005G002500.1
Synonym ATCCD8, CCD8, MAX4, Sb05g000380
Functional annotation beta,beta-carotene 9,10-dioxygenase, putative, expressed
UniProt C5Y2Y1
Pfam PF03055
Panther DB PTHR10543 PTHR10543:SF50
NCBI CDD -
KEGG Orthology K17913; carlactone synthase / all-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G32810 : carotenoid cleavage dioxygenase 8
RAP-DB (Rice) LOC_Os01g38580.2 : beta,beta-carotene 9,10-dioxygenase, putative, expressed
MaizeGDB (Corn) Zm00025a027552
Brachypodium KQK09708 , PNT72843 , PNT72842
Barley -
Wheat TraesCS2A02G074900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G039300 short-chain dehydrogenase/reductase, putative, expressed -
2 Sobic.001G537600 expressed protein -
3 Sobic.006G280900 zinc finger, C3HC4 type domain containing protein, expressed -
4 Sobic.006G146400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
5 Sobic.009G238200 transcription factor(PubMedID : 30367619)@WRKY19, expressed -
6 Sobic.006G065200 SAM domain family protein, expressed -
7 Sobic.010G106400 - -
8 Sobic.001G344450 - K02998: RP-SAe, small subunit ribosomal protein SAe
9 Sobic.004G302400 NAC domain containing protein, putative, expressed -
10 Sobic.008G096900 protein of unknown function DUF502 domain containing protein, expressed -
11 Sobic.006G103601 - -
12 Sobic.009G236000 GATA zinc finger domain containing protein, expressed -
13 Sobic.006G222650 - -
14 Sobic.002G116300 poly synthetase 1, putative, expressed K10798: poly [ADP-ribose] polymerase 2/3/4
15 Sobic.009G083100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.002G068500 expressed protein -
17 Sobic.002G252700 vignain precursor, putative, expressed -
18 Sobic.003G224000 - -
19 Sobic.001G543600 tetraspanin family protein, putative, expressed -
20 Sobic.004G011201 - K10143: RFWD2, E3 ubiquitin-protein ligase RFWD2


Gene co-expression network
sample Sobic005G002500 Sobic005G002500 Sobic009G039300 Sobic009G039300 Sobic005G002500--Sobic009G039300 Sobic001G537600 Sobic001G537600 Sobic005G002500--Sobic001G537600 Sobic006G280900 Sobic006G280900 Sobic005G002500--Sobic006G280900 Sobic006G146400 Sobic006G146400 Sobic005G002500--Sobic006G146400 Sobic009G238200 Sobic009G238200 Sobic005G002500--Sobic009G238200 Sobic006G065200 Sobic006G065200 Sobic005G002500--Sobic006G065200 Sobic010G106400 Sobic010G106400 Sobic005G002500--Sobic010G106400 Sobic001G344450 Sobic001G344450 Sobic005G002500--Sobic001G344450 Sobic004G302400 Sobic004G302400 Sobic005G002500--Sobic004G302400 Sobic009G039300--Sobic001G344450 Sobic009G039300--Sobic005G002500 Sobic008G096900 Sobic008G096900 Sobic009G039300--Sobic008G096900 Sobic009G039300--Sobic006G280900 Sobic002G116300 Sobic002G116300 Sobic009G039300--Sobic002G116300 Sobic001G541166 Sobic001G541166 Sobic009G039300--Sobic001G541166 Sobic009G039300--Sobic009G238200 Sobic009G039300--Sobic004G302400 Sobic009G039300--Sobic006G146400 Sobic001G537600--Sobic010G106400 Sobic001G068901 Sobic001G068901 Sobic001G537600--Sobic001G068901 Sobic001G537600--Sobic006G146400 Sobic001G537600--Sobic009G238200 Sobic001G537600--Sobic006G280900 Sobic001G537600--Sobic006G065200 Sobic010G257300 Sobic010G257300 Sobic001G537600--Sobic010G257300 Sobic004G012100 Sobic004G012100 Sobic001G537600--Sobic004G012100 Sobic006G103601 Sobic006G103601 Sobic001G537600--Sobic006G103601 Sobic006G280900--Sobic006G146400 Sobic006G222650 Sobic006G222650 Sobic006G280900--Sobic006G222650 Sobic006G280900--Sobic004G302400 Sobic006G280900--Sobic001G537600 Sobic009G083100 Sobic009G083100 Sobic006G280900--Sobic009G083100 Sobic006G280900--Sobic009G238200 Sobic006G280900--Sobic002G116300 Sobic006G280900--Sobic010G106400 Sobic010G035300 Sobic010G035300 Sobic006G280900--Sobic010G035300 Sobic006G146400--Sobic006G280900 Sobic006G146400--Sobic006G222650 Sobic006G146400--Sobic002G116300 Sobic006G146400--Sobic009G238200 Sobic006G146400--Sobic001G537600 Sobic006G146400--Sobic004G302400 Sobic006G146400--Sobic010G035300 Sobic006G146400--Sobic006G103601 Sobic003G379500 Sobic003G379500 Sobic006G146400--Sobic003G379500 Sobic009G238200--Sobic002G116300 Sobic001G115900 Sobic001G115900 Sobic009G238200--Sobic001G115900 Sobic003G167825 Sobic003G167825 Sobic009G238200--Sobic003G167825 Sobic009G238200--Sobic006G103601 Sobic006G069050 Sobic006G069050 Sobic009G238200--Sobic006G069050 Sobic009G258150 Sobic009G258150 Sobic009G238200--Sobic009G258150 Sobic009G238200--Sobic006G146400 Sobic009G085600 Sobic009G085600 Sobic009G238200--Sobic009G085600 Sobic003G126400 Sobic003G126400 Sobic009G238200--Sobic003G126400 Sobic006G065200--Sobic010G106400 Sobic006G065200--Sobic001G537600 Sobic007G165200 Sobic007G165200 Sobic006G065200--Sobic007G165200 Sobic006G065200--Sobic006G280900 Sobic006G065200--Sobic001G068901 Sobic006G065200--Sobic006G103601 Sobic001G308450 Sobic001G308450 Sobic006G065200--Sobic001G308450 Sobic001G543600 Sobic001G543600 Sobic006G065200--Sobic001G543600 Sobic006G065200--Sobic009G238200 Sobic010G106400--Sobic001G537600 Sobic010G106400--Sobic009G238200 Sobic010G106400--Sobic006G065200 Sobic010G106400--Sobic006G103601 Sobic010G106400--Sobic001G068901 Sobic010G106400--Sobic009G258150 Sobic010G106400--Sobic006G280900 Sobic010G106400--Sobic004G012100 Sobic010G106400--Sobic006G146400 Sobic008G120066 Sobic008G120066 Sobic001G344450--Sobic008G120066 Sobic001G344450--Sobic009G039300 Sobic001G096800 Sobic001G096800 Sobic001G344450--Sobic001G096800 Sobic001G344450--Sobic005G002500 Sobic001G163000 Sobic001G163000 Sobic001G344450--Sobic001G163000 Sobic001G501500 Sobic001G501500 Sobic001G344450--Sobic001G501500 Sobic009G114900 Sobic009G114900 Sobic001G344450--Sobic009G114900 Sobic009G236000 Sobic009G236000 Sobic001G344450--Sobic009G236000 Sobic008G192800 Sobic008G192800 Sobic001G344450--Sobic008G192800 Sobic004G302400--Sobic006G222650 Sobic009G174600 Sobic009G174600 Sobic004G302400--Sobic009G174600 Sobic004G302400--Sobic010G035300 Sobic004G302400--Sobic002G116300 Sobic006G162300 Sobic006G162300 Sobic004G302400--Sobic006G162300 Sobic002G065300 Sobic002G065300 Sobic004G302400--Sobic002G065300 Sobic004G302400--Sobic009G238200 Sobic004G302400--Sobic006G146400 Sobic004G302400--Sobic006G280900
Octagon: transcription factors


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