Gene annotation
Transcriptome id Sobic.003G040500.1
Synonym NF-YC13, Nuclear Factor Y, Sb03g003610, SbNF-YC5
Functional annotation tentative name (PubMedID : 31536532)
histone-like transcription factor and archaeal histone, putative, expressed
UniProt C5XMM7
Pfam PF00808
Panther DB PTHR10252 PTHR10252:SF25
NCBI CDD -
KEGG Orthology K03004; DNA-directed RNA polymerase I subunit RPA43
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G43250 : nuclear factor Y, subunit C13
RAP-DB (Rice) LOC_Os01g08790.1 : histone-like transcription factor and archaeal histone, putative, expressed
MaizeGDB (Corn) Zm00025a023149
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G370100 proline-rich protein, putative, expressed -
2 Sobic.001G309000 glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
3 Sobic.003G149900 PPR repeat domain containing protein, putative, expressed -
4 Sobic.006G037000 - -
5 Sobic.003G279600 - -
6 Sobic.002G326200 TKL_IRAK_DUF26-la.4 - DUF26 kinases have homology to DUF26 containing loci, expressed -
7 Sobic.001G523300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@heavy metal-associated domain containing protein, expressed -
8 Sobic.010G155901 - -
9 Sobic.006G110600 - -
10 Sobic.010G257300 serine esterase, putative, expressed K15889: prenylcysteine alpha-carboxyl methylesterase
11 Sobic.004G160950 - -
12 Sobic.009G200100 GDSL-like lipase/acylhydrolase, putative, expressed -
13 Sobic.007G174100 carrier, putative, expressed -
14 Sobic.009G031300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide containing protein, putative, expressed -
15 Sobic.006G229600 serine/threonine-protein kinase receptor precursor, putative, expressed -
16 Sobic.003G400332 - -
17 Sobic.010G132300 CDK5RAP3, putative, expressed -
18 Sobic.010G055600 ThiF family domain containing protein, putative, expressed K11996: MOCS3, adenylyltransferase and sulfurtransferase
19 Sobic.001G212701 - -
20 Sobic.008G096900 protein of unknown function DUF502 domain containing protein, expressed -


Gene co-expression network
sample Sobic003G040500 Sobic003G040500 Sobic002G370100 Sobic002G370100 Sobic003G040500--Sobic002G370100 Sobic001G309000 Sobic001G309000 Sobic003G040500--Sobic001G309000 Sobic003G149900 Sobic003G149900 Sobic003G040500--Sobic003G149900 Sobic006G037000 Sobic006G037000 Sobic003G040500--Sobic006G037000 Sobic003G279600 Sobic003G279600 Sobic003G040500--Sobic003G279600 Sobic002G326200 Sobic002G326200 Sobic003G040500--Sobic002G326200 Sobic001G523300 Sobic001G523300 Sobic003G040500--Sobic001G523300 Sobic010G155901 Sobic010G155901 Sobic003G040500--Sobic010G155901 Sobic006G110600 Sobic006G110600 Sobic003G040500--Sobic006G110600 Sobic002G370100--Sobic003G040500 Sobic003G400332 Sobic003G400332 Sobic002G370100--Sobic003G400332 Sobic002G314950 Sobic002G314950 Sobic002G370100--Sobic002G314950 Sobic007G200200 Sobic007G200200 Sobic002G370100--Sobic007G200200 Sobic010G002500 Sobic010G002500 Sobic002G370100--Sobic010G002500 Sobic006G053000 Sobic006G053000 Sobic002G370100--Sobic006G053000 Sobic002G370100--Sobic010G155901 Sobic002G370100--Sobic001G309000 Sobic002G271900 Sobic002G271900 Sobic002G370100--Sobic002G271900 Sobic001G309000--Sobic003G279600 Sobic004G160950 Sobic004G160950 Sobic001G309000--Sobic004G160950 Sobic008G096150 Sobic008G096150 Sobic001G309000--Sobic008G096150 Sobic001G212701 Sobic001G212701 Sobic001G309000--Sobic001G212701 Sobic007G174100 Sobic007G174100 Sobic001G309000--Sobic007G174100 Sobic003G178400 Sobic003G178400 Sobic001G309000--Sobic003G178400 Sobic010G132300 Sobic010G132300 Sobic001G309000--Sobic010G132300 Sobic010G055600 Sobic010G055600 Sobic001G309000--Sobic010G055600 Sobic001G309000--Sobic006G110600 Sobic006G058300 Sobic006G058300 Sobic003G149900--Sobic006G058300 Sobic009G152901 Sobic009G152901 Sobic003G149900--Sobic009G152901 Sobic001G537900 Sobic001G537900 Sobic003G149900--Sobic001G537900 Sobic008G020300 Sobic008G020300 Sobic003G149900--Sobic008G020300 Sobic004G016600 Sobic004G016600 Sobic003G149900--Sobic004G016600 Sobic004G354800 Sobic004G354800 Sobic003G149900--Sobic004G354800 Sobic001G016900 Sobic001G016900 Sobic003G149900--Sobic001G016900 Sobic001G120100 Sobic001G120100 Sobic003G149900--Sobic001G120100 Sobic003G038300 Sobic003G038300 Sobic003G149900--Sobic003G038300 Sobic009G031300 Sobic009G031300 Sobic006G037000--Sobic009G031300 Sobic006G037000--Sobic003G149900 Sobic001G115900 Sobic001G115900 Sobic006G037000--Sobic001G115900 Sobic008G096900 Sobic008G096900 Sobic006G037000--Sobic008G096900 Sobic009G238200 Sobic009G238200 Sobic006G037000--Sobic009G238200 Sobic006G037000--Sobic007G174100 Sobic009G258150 Sobic009G258150 Sobic006G037000--Sobic009G258150 Sobic010G200800 Sobic010G200800 Sobic006G037000--Sobic010G200800 Sobic006G069050 Sobic006G069050 Sobic006G037000--Sobic006G069050 Sobic003G279600--Sobic003G178400 Sobic003G279600--Sobic004G160950 Sobic003G279600--Sobic001G309000 Sobic002G284701 Sobic002G284701 Sobic003G279600--Sobic002G284701 Sobic003G279600--Sobic010G132300 Sobic007G157200 Sobic007G157200 Sobic003G279600--Sobic007G157200 Sobic002G188100 Sobic002G188100 Sobic003G279600--Sobic002G188100 Sobic004G069600 Sobic004G069600 Sobic003G279600--Sobic004G069600 Sobic003G279600--Sobic001G212701 Sobic002G326200--Sobic007G174100 Sobic002G326200--Sobic010G200800 Sobic005G076100 Sobic005G076100 Sobic002G326200--Sobic005G076100 Sobic002G326200--Sobic003G149900 Sobic002G326200--Sobic006G058300 Sobic003G008850 Sobic003G008850 Sobic002G326200--Sobic003G008850 Sobic010G257300 Sobic010G257300 Sobic002G326200--Sobic010G257300 Sobic002G326200--Sobic001G115900 Sobic002G326200--Sobic009G258150 Sobic003G406240 Sobic003G406240 Sobic001G523300--Sobic003G406240 Sobic002G396900 Sobic002G396900 Sobic001G523300--Sobic002G396900 Sobic001G523300--Sobic008G096150 Sobic001G523300--Sobic009G031300 Sobic001G523300--Sobic006G037000 Sobic001G523300--Sobic010G200800 Sobic009G072400 Sobic009G072400 Sobic001G523300--Sobic009G072400 Sobic001G523300--Sobic002G326200 Sobic001G523300--Sobic007G174100 Sobic010G155901--Sobic003G400332 Sobic010G155901--Sobic006G058300 Sobic001G407000 Sobic001G407000 Sobic010G155901--Sobic001G407000 Sobic010G155901--Sobic010G132300 Sobic010G155901--Sobic008G020300 Sobic010G155901--Sobic003G149900 Sobic001G139750 Sobic001G139750 Sobic010G155901--Sobic001G139750 Sobic001G541900 Sobic001G541900 Sobic010G155901--Sobic001G541900 Sobic003G105300 Sobic003G105300 Sobic010G155901--Sobic003G105300 Sobic006G110600--Sobic002G271900 Sobic006G110600--Sobic001G212701 Sobic003G313700 Sobic003G313700 Sobic006G110600--Sobic003G313700 Sobic006G110600--Sobic010G132300 Sobic006G110600--Sobic002G326200 Sobic006G229600 Sobic006G229600 Sobic006G110600--Sobic006G229600 Sobic004G314750 Sobic004G314750 Sobic006G110600--Sobic004G314750 Sobic002G133600 Sobic002G133600 Sobic006G110600--Sobic002G133600 Sobic006G110600--Sobic007G174100
Octagon: transcription factors


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