Gene annotation
Transcriptome id Sobic.001G309000.1
Synonym XTR8, Sb01g030140, XTH31, ATXTR8
Functional annotation glycosyl hydrolases family 16, putative, expressed
UniProt C5WTH6
Pfam PF06955 PF00722
Panther DB PTHR31062 PTHR31062:SF22
NCBI CDD -
KEGG Orthology K08235; xyloglucan:xyloglucosyl transferase
Gene Ontology GO:0016762; xyloglucan:xyloglucosyl transferase activity GO:0006073cellular glucan metabolic process GO:0005618cell wall GO:0005975carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT3G44990 : xyloglucan endo-transglycosylase-related 8
RAP-DB (Rice) LOC_Os10g39840.1 : glycosyl hydrolases family 16, putative, expressed
MaizeGDB (Corn) Zm00025a048023 , Zm00025a000152 , Zm00025a018308 , Zm00025a003233 , Zm00025a048260 , Zm00025a018310 , Zm00025a032745 , Zm00025a056955 , Zm00025a009908
Brachypodium KQK17339 , KQK16264 , KQJ95699 , KQJ95697
Barley HORVU1Hr1G087320.3 , HORVU1Hr1G087320.2 , HORVU1Hr1G087320.1 , HORVU4Hr1G090820.2 , HORVU6Hr1G081590.1 , HORVU6Hr1G081590.3 , HORVU6Hr1G081590.2 , HORVU6Hr1G081590.4 , HORVU7Hr1G081740.1 , HORVU2Hr1G108420.6 , HORVU2Hr1G108420.5 , HORVU7Hr1G086890.4 , HORVU7Hr1G086890.5 , HORVU7Hr1G086890.6 , HORVU7Hr1G086890.7 , HORVU7Hr1G086890.1 , HORVU7Hr1G086890.2 , HORVU7Hr1G086890.3 , HORVU7Hr1G086890.8 , HORVU7Hr1G086890.9 , HORVU7Hr1G098390.1 , HORVU7Hr1G098390.2 , HORVU7Hr1G098390.4 , HORVU2Hr1G108420.4 , HORVU6Hr1G081590.5
Wheat TraesCS2D02G498400 , TraesCS1A02G396200 , TraesCS1D02G404300 , TraesCS2B02G526500 , TraesCS7A02G363000 , TraesCS2A02G484100 , TraesCS2A02G484100 , TraesCS7B02G265000 , TraesCS7B02G265000 , TraesCS5A02G548500 , TraesCS4D02G358700 , TraesCS2D02G498500 , TraesCS2D02G498600 , TraesCS1B02G424500 , TraesCS7B02G327500 , TraesCS6B02G368300 , TraesCS7D02G360100 , TraesCS7D02G419600 , TraesCS2B02G454800 , TraesCS2D02G484000 , TraesCS2D02G484000 , TraesCS2D02G498700 , TraesCS4B02G383000 , TraesCS7A02G427200 , TraesCS2D02G431800 , TraesCS7A02G331200 , TraesCS2B02G510200 , TraesCS2B02G510200
Populus -


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cDNA sequences
Sobic.001G309000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G279600 - -
2 Sobic.004G160950 - -
3 Sobic.008G096150 - -
4 Sobic.001G212701 - -
5 Sobic.007G174100 carrier, putative, expressed -
6 Sobic.003G178400 - -
7 Sobic.010G132300 CDK5RAP3, putative, expressed -
8 Sobic.010G055600 ThiF family domain containing protein, putative, expressed K11996: MOCS3, adenylyltransferase and sulfurtransferase
9 Sobic.006G110600 - -
10 Sobic.007G157200 - -
11 Sobic.003G259000 - -
12 Sobic.010G150600 - -
13 Sobic.002G284701 - -
14 Sobic.002G326200 TKL_IRAK_DUF26-la.4 - DUF26 kinases have homology to DUF26 containing loci, expressed -
15 Sobic.002G234900 zinc-binding alcohol dehydrogenase domain-containing protein 2, putative, expressed -
16 Sobic.002G271900 EAP30/Vps36 family domain containing protein, expressed K12188: SNF8, ESCRT-II complex subunit VPS22
17 Sobic.009G053201 - -
18 Sobic.001G523300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@heavy metal-associated domain containing protein, expressed -
19 Sobic.010G097800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.003G313700 disease resistance protein RPM1, putative, expressed K13457: RPM1, disease resistance protein RPM1


Gene co-expression network
sample Sobic001G309000 Sobic001G309000 Sobic003G279600 Sobic003G279600 Sobic001G309000--Sobic003G279600 Sobic004G160950 Sobic004G160950 Sobic001G309000--Sobic004G160950 Sobic008G096150 Sobic008G096150 Sobic001G309000--Sobic008G096150 Sobic001G212701 Sobic001G212701 Sobic001G309000--Sobic001G212701 Sobic007G174100 Sobic007G174100 Sobic001G309000--Sobic007G174100 Sobic003G178400 Sobic003G178400 Sobic001G309000--Sobic003G178400 Sobic010G132300 Sobic010G132300 Sobic001G309000--Sobic010G132300 Sobic010G055600 Sobic010G055600 Sobic001G309000--Sobic010G055600 Sobic006G110600 Sobic006G110600 Sobic001G309000--Sobic006G110600 Sobic003G279600--Sobic003G178400 Sobic003G279600--Sobic004G160950 Sobic003G279600--Sobic001G309000 Sobic002G284701 Sobic002G284701 Sobic003G279600--Sobic002G284701 Sobic003G279600--Sobic010G132300 Sobic007G157200 Sobic007G157200 Sobic003G279600--Sobic007G157200 Sobic002G188100 Sobic002G188100 Sobic003G279600--Sobic002G188100 Sobic004G069600 Sobic004G069600 Sobic003G279600--Sobic004G069600 Sobic003G279600--Sobic001G212701 Sobic004G160950--Sobic010G132300 Sobic004G160950--Sobic007G174100 Sobic002G231800 Sobic002G231800 Sobic004G160950--Sobic002G231800 Sobic004G160950--Sobic003G279600 Sobic008G020300 Sobic008G020300 Sobic004G160950--Sobic008G020300 Sobic004G160950--Sobic002G284701 Sobic003G149900 Sobic003G149900 Sobic004G160950--Sobic003G149900 Sobic006G019901 Sobic006G019901 Sobic004G160950--Sobic006G019901 Sobic003G008850 Sobic003G008850 Sobic004G160950--Sobic003G008850 Sobic008G096150--Sobic007G174100 Sobic010G150600 Sobic010G150600 Sobic008G096150--Sobic010G150600 Sobic001G523300 Sobic001G523300 Sobic008G096150--Sobic001G523300 Sobic002G326200 Sobic002G326200 Sobic008G096150--Sobic002G326200 Sobic008G096150--Sobic001G212701 Sobic002G234900 Sobic002G234900 Sobic008G096150--Sobic002G234900 Sobic009G031300 Sobic009G031300 Sobic008G096150--Sobic009G031300 Sobic010G200800 Sobic010G200800 Sobic008G096150--Sobic010G200800 Sobic008G096150--Sobic001G309000 Sobic001G212701--Sobic007G157200 Sobic002G114600 Sobic002G114600 Sobic001G212701--Sobic002G114600 Sobic001G212701--Sobic010G132300 Sobic004G184500 Sobic004G184500 Sobic001G212701--Sobic004G184500 Sobic004G314750 Sobic004G314750 Sobic001G212701--Sobic004G314750 Sobic001G212701--Sobic007G174100 Sobic001G212701--Sobic002G326200 Sobic001G176800 Sobic001G176800 Sobic001G212701--Sobic001G176800 Sobic005G094500 Sobic005G094500 Sobic001G212701--Sobic005G094500 Sobic005G076100 Sobic005G076100 Sobic007G174100--Sobic005G076100 Sobic007G174100--Sobic010G132300 Sobic007G174100--Sobic003G149900 Sobic007G174100--Sobic002G326200 Sobic007G174100--Sobic004G160950 Sobic007G174100--Sobic008G096150 Sobic006G058300 Sobic006G058300 Sobic007G174100--Sobic006G058300 Sobic008G096900 Sobic008G096900 Sobic007G174100--Sobic008G096900 Sobic007G174100--Sobic003G008850 Sobic003G178400--Sobic003G279600 Sobic003G178400--Sobic004G160950 Sobic003G119266 Sobic003G119266 Sobic003G178400--Sobic003G119266 Sobic003G178400--Sobic002G188100 Sobic003G178400--Sobic004G069600 Sobic003G178400--Sobic002G234900 Sobic006G167200 Sobic006G167200 Sobic003G178400--Sobic006G167200 Sobic003G178400--Sobic001G309000 Sobic006G133650 Sobic006G133650 Sobic003G178400--Sobic006G133650 Sobic010G132300--Sobic007G174100 Sobic010G132300--Sobic004G160950 Sobic010G155901 Sobic010G155901 Sobic010G132300--Sobic010G155901 Sobic010G132300--Sobic001G212701 Sobic010G132300--Sobic005G076100 Sobic010G132300--Sobic002G114600 Sobic010G132300--Sobic003G008850 Sobic002G373200 Sobic002G373200 Sobic010G132300--Sobic002G373200 Sobic002G165401 Sobic002G165401 Sobic010G132300--Sobic002G165401 Sobic010G055600--Sobic010G132300 Sobic010G055600--Sobic004G160950 Sobic010G055600--Sobic007G174100 Sobic010G055600--Sobic001G212701 Sobic010G055600--Sobic001G309000 Sobic010G055600--Sobic003G279600 Sobic010G055600--Sobic003G149900 Sobic002G271900 Sobic002G271900 Sobic010G055600--Sobic002G271900 Sobic010G055600--Sobic002G326200 Sobic006G110600--Sobic002G271900 Sobic006G110600--Sobic001G212701 Sobic003G313700 Sobic003G313700 Sobic006G110600--Sobic003G313700 Sobic006G110600--Sobic010G132300 Sobic006G110600--Sobic002G326200 Sobic006G229600 Sobic006G229600 Sobic006G110600--Sobic006G229600 Sobic006G110600--Sobic004G314750 Sobic002G133600 Sobic002G133600 Sobic006G110600--Sobic002G133600 Sobic006G110600--Sobic007G174100
Octagon: transcription factors


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