Gene annotation
Transcriptome id Sobic.010G055600.1
Synonym Sb10g004850, SIR1, CNX5
Functional annotation ThiF family domain containing protein, putative, expressed
UniProt C5Z503
Pfam PF00581 PF00899
Panther DB PTHR10953 PTHR10953:SF160
NCBI CDD -
KEGG Orthology K11996; MOCS3, adenylyltransferase and sulfurtransferase
Gene Ontology GO:0008641; ubiquitin-like modifier activating enzyme activity


Orthologs (automatic annotation)
TAIR AT5G55130 : co-factor for nitrate, reductase and xanthine dehydrogenase 5
RAP-DB (Rice) LOC_Os02g32460.1 : ThiF family domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a049878 , Zm00025a032498
Brachypodium KQK19410 , PNT76436
Barley HORVU7Hr1G027500.8 , HORVU7Hr1G027500.3 , HORVU7Hr1G027500.2 , HORVU7Hr1G027500.1 , HORVU7Hr1G027500.7 , HORVU7Hr1G027500.6 , HORVU7Hr1G027500.5 , HORVU7Hr1G027500.4 , HORVU7Hr1G027500.11 , HORVU7Hr1G027500.10
Wheat TraesCS7B02G032500 , TraesCS7A02G131800 , TraesCS7D02G131100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G132300 CDK5RAP3, putative, expressed -
2 Sobic.004G160950 - -
3 Sobic.007G174100 carrier, putative, expressed -
4 Sobic.001G212701 - -
5 Sobic.001G309000 glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
6 Sobic.003G279600 - -
7 Sobic.003G149900 PPR repeat domain containing protein, putative, expressed -
8 Sobic.002G271900 EAP30/Vps36 family domain containing protein, expressed K12188: SNF8, ESCRT-II complex subunit VPS22
9 Sobic.002G326200 TKL_IRAK_DUF26-la.4 - DUF26 kinases have homology to DUF26 containing loci, expressed -
10 Sobic.010G155901 - -
11 Sobic.009G202900 Positive cytokinine regulator(PubMedID : 30367619)@histidine-containing phosphotransfer protein, putative, expressed K14490: histidine-containing phosphotransfer peotein
12 Sobic.003G400332 - -
13 Sobic.006G058300 expressed protein -
14 Sobic.003G178400 - -
15 Sobic.006G110600 - -
16 Sobic.006G229600 serine/threonine-protein kinase receptor precursor, putative, expressed -
17 Sobic.002G373200 strictosidine synthase, putative, expressed -
18 Sobic.008G096150 - -
19 Sobic.006G037000 - -
20 Sobic.005G076100 rp3 protein, putative, expressed -


Gene co-expression network
sample Sobic010G055600 Sobic010G055600 Sobic010G132300 Sobic010G132300 Sobic010G055600--Sobic010G132300 Sobic004G160950 Sobic004G160950 Sobic010G055600--Sobic004G160950 Sobic007G174100 Sobic007G174100 Sobic010G055600--Sobic007G174100 Sobic001G212701 Sobic001G212701 Sobic010G055600--Sobic001G212701 Sobic001G309000 Sobic001G309000 Sobic010G055600--Sobic001G309000 Sobic003G279600 Sobic003G279600 Sobic010G055600--Sobic003G279600 Sobic003G149900 Sobic003G149900 Sobic010G055600--Sobic003G149900 Sobic002G271900 Sobic002G271900 Sobic010G055600--Sobic002G271900 Sobic002G326200 Sobic002G326200 Sobic010G055600--Sobic002G326200 Sobic010G132300--Sobic007G174100 Sobic010G132300--Sobic004G160950 Sobic010G155901 Sobic010G155901 Sobic010G132300--Sobic010G155901 Sobic010G132300--Sobic001G212701 Sobic005G076100 Sobic005G076100 Sobic010G132300--Sobic005G076100 Sobic002G114600 Sobic002G114600 Sobic010G132300--Sobic002G114600 Sobic003G008850 Sobic003G008850 Sobic010G132300--Sobic003G008850 Sobic002G373200 Sobic002G373200 Sobic010G132300--Sobic002G373200 Sobic002G165401 Sobic002G165401 Sobic010G132300--Sobic002G165401 Sobic004G160950--Sobic010G132300 Sobic004G160950--Sobic007G174100 Sobic002G231800 Sobic002G231800 Sobic004G160950--Sobic002G231800 Sobic004G160950--Sobic003G279600 Sobic008G020300 Sobic008G020300 Sobic004G160950--Sobic008G020300 Sobic002G284701 Sobic002G284701 Sobic004G160950--Sobic002G284701 Sobic004G160950--Sobic003G149900 Sobic006G019901 Sobic006G019901 Sobic004G160950--Sobic006G019901 Sobic004G160950--Sobic003G008850 Sobic007G174100--Sobic005G076100 Sobic007G174100--Sobic010G132300 Sobic007G174100--Sobic003G149900 Sobic007G174100--Sobic002G326200 Sobic007G174100--Sobic004G160950 Sobic008G096150 Sobic008G096150 Sobic007G174100--Sobic008G096150 Sobic006G058300 Sobic006G058300 Sobic007G174100--Sobic006G058300 Sobic008G096900 Sobic008G096900 Sobic007G174100--Sobic008G096900 Sobic007G174100--Sobic003G008850 Sobic007G157200 Sobic007G157200 Sobic001G212701--Sobic007G157200 Sobic001G212701--Sobic002G114600 Sobic001G212701--Sobic010G132300 Sobic004G184500 Sobic004G184500 Sobic001G212701--Sobic004G184500 Sobic004G314750 Sobic004G314750 Sobic001G212701--Sobic004G314750 Sobic001G212701--Sobic007G174100 Sobic001G212701--Sobic002G326200 Sobic001G176800 Sobic001G176800 Sobic001G212701--Sobic001G176800 Sobic005G094500 Sobic005G094500 Sobic001G212701--Sobic005G094500 Sobic001G309000--Sobic003G279600 Sobic001G309000--Sobic004G160950 Sobic001G309000--Sobic008G096150 Sobic001G309000--Sobic001G212701 Sobic001G309000--Sobic007G174100 Sobic003G178400 Sobic003G178400 Sobic001G309000--Sobic003G178400 Sobic001G309000--Sobic010G132300 Sobic001G309000--Sobic010G055600 Sobic006G110600 Sobic006G110600 Sobic001G309000--Sobic006G110600 Sobic003G279600--Sobic003G178400 Sobic003G279600--Sobic004G160950 Sobic003G279600--Sobic001G309000 Sobic003G279600--Sobic002G284701 Sobic003G279600--Sobic010G132300 Sobic003G279600--Sobic007G157200 Sobic002G188100 Sobic002G188100 Sobic003G279600--Sobic002G188100 Sobic004G069600 Sobic004G069600 Sobic003G279600--Sobic004G069600 Sobic003G279600--Sobic001G212701 Sobic003G149900--Sobic006G058300 Sobic009G152901 Sobic009G152901 Sobic003G149900--Sobic009G152901 Sobic001G537900 Sobic001G537900 Sobic003G149900--Sobic001G537900 Sobic003G149900--Sobic008G020300 Sobic004G016600 Sobic004G016600 Sobic003G149900--Sobic004G016600 Sobic004G354800 Sobic004G354800 Sobic003G149900--Sobic004G354800 Sobic001G016900 Sobic001G016900 Sobic003G149900--Sobic001G016900 Sobic001G120100 Sobic001G120100 Sobic003G149900--Sobic001G120100 Sobic003G038300 Sobic003G038300 Sobic003G149900--Sobic003G038300 Sobic006G229600 Sobic006G229600 Sobic002G271900--Sobic006G229600 Sobic009G004300 Sobic009G004300 Sobic002G271900--Sobic009G004300 Sobic002G271900--Sobic002G326200 Sobic002G133600 Sobic002G133600 Sobic002G271900--Sobic002G133600 Sobic002G271900--Sobic006G110600 Sobic002G271900--Sobic006G058300 Sobic004G012100 Sobic004G012100 Sobic002G271900--Sobic004G012100 Sobic002G271900--Sobic010G155901 Sobic009G258150 Sobic009G258150 Sobic002G271900--Sobic009G258150 Sobic002G326200--Sobic007G174100 Sobic010G200800 Sobic010G200800 Sobic002G326200--Sobic010G200800 Sobic002G326200--Sobic005G076100 Sobic002G326200--Sobic003G149900 Sobic002G326200--Sobic006G058300 Sobic002G326200--Sobic003G008850 Sobic010G257300 Sobic010G257300 Sobic002G326200--Sobic010G257300 Sobic001G115900 Sobic001G115900 Sobic002G326200--Sobic001G115900 Sobic002G326200--Sobic009G258150
Octagon: transcription factors


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