Gene annotation
Transcriptome id Sobic.003G400332.1
Synonym -
Functional annotation -
UniProt A0A1W0W144
Pfam -
Panther DB PTHR11730 PTHR11730:SF45
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0008519ammonium transmembrane transporter activity


Orthologs (automatic annotation)
TAIR AT2G38290 : ammonium transporter 2
RAP-DB (Rice) LOC_Os07g07070.1 : anthranilate phosphoribosyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a043934 , Zm00025a045087 , Zm00025a039553 , Zm00025a037612
Brachypodium KQK10804
Barley HORVU3Hr1G082610.2 , HORVU3Hr1G082610.1 , HORVU1Hr1G070730.2 , HORVU1Hr1G070730.6 , HORVU1Hr1G070730.4
Wheat TraesCS1D02G296600 , TraesCS1A02G295300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G155901 - -
2 Sobic.001G139750 - -
3 Sobic.006G058300 expressed protein -
4 Sobic.002G373200 strictosidine synthase, putative, expressed -
5 Sobic.005G076100 rp3 protein, putative, expressed -
6 Sobic.003G149900 PPR repeat domain containing protein, putative, expressed -
7 Sobic.001G407000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ proteins of unknown function domain containing protein, putative, expressed -
8 Sobic.010G132300 CDK5RAP3, putative, expressed -
9 Sobic.001G541900 "similar to Nitrate/chlorate transporter, putative, expressed"(PubMedID : 29862293)@peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
10 Sobic.009G082400 - -
11 Sobic.007G174100 carrier, putative, expressed -
12 Sobic.008G020300 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
13 Sobic.003G136700 - -
14 Sobic.004G354800 - -
15 Sobic.001G537900 AGAP010609-PA, putative, expressed K17867: DPH4, diphthamide biosynthesis protein 4
16 Sobic.006G172651 - -
17 Sobic.003G105300 - -
18 Sobic.001G213400 HD domain containing protein 2, putative, expressed K06950: uncharacterized protein
19 Sobic.001G261440 - -
20 Sobic.004G012100 basic helix-loop-helix DND-binding domain containing protein, expressed -


Gene co-expression network
sample Sobic003G400332 Sobic003G400332 Sobic010G155901 Sobic010G155901 Sobic003G400332--Sobic010G155901 Sobic001G139750 Sobic001G139750 Sobic003G400332--Sobic001G139750 Sobic006G058300 Sobic006G058300 Sobic003G400332--Sobic006G058300 Sobic002G373200 Sobic002G373200 Sobic003G400332--Sobic002G373200 Sobic005G076100 Sobic005G076100 Sobic003G400332--Sobic005G076100 Sobic003G149900 Sobic003G149900 Sobic003G400332--Sobic003G149900 Sobic001G407000 Sobic001G407000 Sobic003G400332--Sobic001G407000 Sobic010G132300 Sobic010G132300 Sobic003G400332--Sobic010G132300 Sobic001G541900 Sobic001G541900 Sobic003G400332--Sobic001G541900 Sobic010G155901--Sobic003G400332 Sobic010G155901--Sobic006G058300 Sobic010G155901--Sobic001G407000 Sobic010G155901--Sobic010G132300 Sobic008G020300 Sobic008G020300 Sobic010G155901--Sobic008G020300 Sobic010G155901--Sobic003G149900 Sobic010G155901--Sobic001G139750 Sobic010G155901--Sobic001G541900 Sobic003G105300 Sobic003G105300 Sobic010G155901--Sobic003G105300 Sobic008G025800 Sobic008G025800 Sobic001G139750--Sobic008G025800 Sobic001G139750--Sobic003G400332 Sobic003G136700 Sobic003G136700 Sobic001G139750--Sobic003G136700 Sobic001G213400 Sobic001G213400 Sobic001G139750--Sobic001G213400 Sobic001G139750--Sobic005G076100 Sobic001G139750--Sobic006G058300 Sobic009G082400 Sobic009G082400 Sobic001G139750--Sobic009G082400 Sobic004G354800 Sobic004G354800 Sobic001G139750--Sobic004G354800 Sobic007G175701 Sobic007G175701 Sobic001G139750--Sobic007G175701 Sobic006G058300--Sobic003G149900 Sobic004G016600 Sobic004G016600 Sobic006G058300--Sobic004G016600 Sobic003G038300 Sobic003G038300 Sobic006G058300--Sobic003G038300 Sobic003G126400 Sobic003G126400 Sobic006G058300--Sobic003G126400 Sobic006G069050 Sobic006G069050 Sobic006G058300--Sobic006G069050 Sobic006G058300--Sobic008G020300 Sobic009G152901 Sobic009G152901 Sobic006G058300--Sobic009G152901 Sobic001G537900 Sobic001G537900 Sobic006G058300--Sobic001G537900 Sobic006G058300--Sobic001G407000 Sobic002G373200--Sobic010G132300 Sobic002G373200--Sobic010G155901 Sobic002G373200--Sobic003G400332 Sobic007G174100 Sobic007G174100 Sobic002G373200--Sobic007G174100 Sobic002G373200--Sobic005G076100 Sobic002G373200--Sobic009G082400 Sobic009G202900 Sobic009G202900 Sobic002G373200--Sobic009G202900 Sobic002G373200--Sobic006G058300 Sobic002G373200--Sobic003G149900 Sobic005G076100--Sobic009G082400 Sobic005G076100--Sobic004G016600 Sobic005G076100--Sobic001G537900 Sobic003G008850 Sobic003G008850 Sobic005G076100--Sobic003G008850 Sobic005G076100--Sobic007G174100 Sobic005G076100--Sobic004G354800 Sobic002G165401 Sobic002G165401 Sobic005G076100--Sobic002G165401 Sobic005G076100--Sobic003G149900 Sobic005G076100--Sobic006G058300 Sobic003G149900--Sobic006G058300 Sobic003G149900--Sobic009G152901 Sobic003G149900--Sobic001G537900 Sobic003G149900--Sobic008G020300 Sobic003G149900--Sobic004G016600 Sobic003G149900--Sobic004G354800 Sobic001G016900 Sobic001G016900 Sobic003G149900--Sobic001G016900 Sobic001G120100 Sobic001G120100 Sobic003G149900--Sobic001G120100 Sobic003G149900--Sobic003G038300 Sobic001G407000--Sobic003G105300 Sobic001G407000--Sobic008G020300 Sobic001G255700 Sobic001G255700 Sobic001G407000--Sobic001G255700 Sobic001G407000--Sobic001G541900 Sobic002G284800 Sobic002G284800 Sobic001G407000--Sobic002G284800 Sobic003G368150 Sobic003G368150 Sobic001G407000--Sobic003G368150 Sobic009G163500 Sobic009G163500 Sobic001G407000--Sobic009G163500 Sobic010G224800 Sobic010G224800 Sobic001G407000--Sobic010G224800 Sobic001G407000--Sobic001G537900 Sobic010G132300--Sobic007G174100 Sobic004G160950 Sobic004G160950 Sobic010G132300--Sobic004G160950 Sobic010G132300--Sobic010G155901 Sobic001G212701 Sobic001G212701 Sobic010G132300--Sobic001G212701 Sobic010G132300--Sobic005G076100 Sobic002G114600 Sobic002G114600 Sobic010G132300--Sobic002G114600 Sobic010G132300--Sobic003G008850 Sobic010G132300--Sobic002G373200 Sobic010G132300--Sobic002G165401 Sobic001G541900--Sobic001G407000 Sobic001G541900--Sobic008G020300 Sobic001G541900--Sobic001G537900 Sobic001G541900--Sobic009G163500 Sobic001G541900--Sobic004G354800 Sobic001G541900--Sobic003G105300 Sobic004G197300 Sobic004G197300 Sobic001G541900--Sobic004G197300 Sobic001G541900--Sobic001G255700 Sobic001G541900--Sobic009G082400
Octagon: transcription factors


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