Gene annotation
Transcriptome id Sobic.001G261440.1
Synonym -
Functional annotation -
UniProt A0A1Z5S818 , A0A120GUS4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G172651 - -
2 Sobic.003G109400 - -
3 Sobic.001G145300 - -
4 Sobic.002G206200 monogalactosyldiacylglycerol synthase, putative, expressed K03715: 1,2-diacylglycerol 3-beta-galactosyltransferase
5 Sobic.003G136700 - -
6 Sobic.002G156300 - -
7 Sobic.010G114400 expressed protein -
8 Sobic.010G224800 patellin-5, putative, expressed -
9 Sobic.004G354800 - -
10 Sobic.007G001300 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
11 Sobic.008G020300 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
12 Sobic.009G163500 - -
13 Sobic.003G201400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hsp20/alpha crystallin family protein, putative, expressed -
14 Sobic.009G031100 cycloeucalenol cycloisomerase, putative, expressed K08246: cycloeucalenol cycloisomerase
15 Sobic.010G122533 - -
16 Sobic.006G167200 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
17 Sobic.001G541900 "similar to Nitrate/chlorate transporter, putative, expressed"(PubMedID : 29862293)@peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
18 Sobic.001G537900 AGAP010609-PA, putative, expressed K17867: DPH4, diphthamide biosynthesis protein 4
19 Sobic.004G197300 - -
20 Sobic.009G127600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide-like helical, putative, expressed -


Gene co-expression network
sample Sobic001G261440 Sobic001G261440 Sobic006G172651 Sobic006G172651 Sobic001G261440--Sobic006G172651 Sobic003G109400 Sobic003G109400 Sobic001G261440--Sobic003G109400 Sobic001G145300 Sobic001G145300 Sobic001G261440--Sobic001G145300 Sobic002G206200 Sobic002G206200 Sobic001G261440--Sobic002G206200 Sobic003G136700 Sobic003G136700 Sobic001G261440--Sobic003G136700 Sobic002G156300 Sobic002G156300 Sobic001G261440--Sobic002G156300 Sobic010G114400 Sobic010G114400 Sobic001G261440--Sobic010G114400 Sobic010G224800 Sobic010G224800 Sobic001G261440--Sobic010G224800 Sobic004G354800 Sobic004G354800 Sobic001G261440--Sobic004G354800 Sobic006G172651--Sobic001G261440 Sobic006G172651--Sobic003G109400 Sobic006G172651--Sobic002G206200 Sobic006G172651--Sobic001G145300 Sobic006G172651--Sobic002G156300 Sobic006G172651--Sobic003G136700 Sobic006G172651--Sobic010G114400 Sobic006G172651--Sobic010G224800 Sobic007G001300 Sobic007G001300 Sobic006G172651--Sobic007G001300 Sobic003G109400--Sobic002G156300 Sobic003G109400--Sobic010G224800 Sobic003G109400--Sobic007G001300 Sobic003G109400--Sobic010G114400 Sobic009G163500 Sobic009G163500 Sobic003G109400--Sobic009G163500 Sobic009G031100 Sobic009G031100 Sobic003G109400--Sobic009G031100 Sobic008G020300 Sobic008G020300 Sobic003G109400--Sobic008G020300 Sobic003G109400--Sobic002G206200 Sobic004G197300 Sobic004G197300 Sobic003G109400--Sobic004G197300 Sobic001G145300--Sobic006G172651 Sobic001G145300--Sobic001G261440 Sobic001G145300--Sobic002G156300 Sobic009G127600 Sobic009G127600 Sobic001G145300--Sobic009G127600 Sobic001G145300--Sobic008G020300 Sobic001G145300--Sobic003G109400 Sobic001G145300--Sobic010G114400 Sobic001G145300--Sobic007G001300 Sobic001G145300--Sobic003G136700 Sobic002G206200--Sobic003G109400 Sobic002G206200--Sobic002G156300 Sobic002G206200--Sobic006G172651 Sobic002G206200--Sobic010G224800 Sobic002G206200--Sobic009G031100 Sobic002G206200--Sobic009G163500 Sobic002G206200--Sobic007G001300 Sobic002G206200--Sobic010G114400 Sobic002G206200--Sobic001G261440 Sobic003G136700--Sobic009G163500 Sobic003G136700--Sobic004G354800 Sobic003G136700--Sobic003G109400 Sobic003G136700--Sobic006G172651 Sobic004G251350 Sobic004G251350 Sobic003G136700--Sobic004G251350 Sobic001G537900 Sobic001G537900 Sobic003G136700--Sobic001G537900 Sobic003G136700--Sobic004G197300 Sobic009G082400 Sobic009G082400 Sobic003G136700--Sobic009G082400 Sobic003G136700--Sobic008G020300 Sobic002G156300--Sobic007G001300 Sobic002G156300--Sobic003G109400 Sobic002G156300--Sobic010G114400 Sobic002G156300--Sobic010G224800 Sobic002G156300--Sobic009G031100 Sobic003G105300 Sobic003G105300 Sobic002G156300--Sobic003G105300 Sobic002G156300--Sobic004G197300 Sobic002G156300--Sobic008G020300 Sobic002G156300--Sobic009G163500 Sobic010G114400--Sobic010G224800 Sobic010G114400--Sobic002G156300 Sobic010G114400--Sobic007G001300 Sobic010G114400--Sobic003G109400 Sobic010G114400--Sobic009G031100 Sobic002G425900 Sobic002G425900 Sobic010G114400--Sobic002G425900 Sobic010G114400--Sobic004G197300 Sobic010G114400--Sobic009G163500 Sobic010G114400--Sobic003G105300 Sobic010G224800--Sobic010G114400 Sobic010G224800--Sobic007G001300 Sobic010G224800--Sobic003G109400 Sobic010G224800--Sobic002G156300 Sobic010G224800--Sobic009G031100 Sobic010G224800--Sobic002G425900 Sobic010G224800--Sobic003G105300 Sobic010G224800--Sobic004G197300 Sobic010G224800--Sobic009G163500 Sobic004G354800--Sobic009G163500 Sobic004G354800--Sobic001G537900 Sobic004G354800--Sobic003G109400 Sobic004G354800--Sobic008G020300 Sobic004G354800--Sobic003G136700 Sobic004G354800--Sobic004G197300 Sobic008G131800 Sobic008G131800 Sobic004G354800--Sobic008G131800 Sobic009G152901 Sobic009G152901 Sobic004G354800--Sobic009G152901 Sobic001G255700 Sobic001G255700 Sobic004G354800--Sobic001G255700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.