Gene annotation
Transcriptome id Sobic.006G053000.1
Synonym FP3, ATFP3, Sb06g013950
Functional annotation heavy metal-associated domain containing protein, expressed
UniProt A0A1B6PKC1
Pfam PF00403
Panther DB PTHR22814 PTHR22814:SF142
NCBI CDD KOG1603; Copper chaperone
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G63530 : farnesylated protein 3
RAP-DB (Rice) LOC_Os02g30650.1 : heavy metal-associated domain containing protein, expressed
MaizeGDB (Corn) Zm00025a006806 , Zm00025a011750 , Zm00025a017722 , Zm00025a055907 , Zm00025a011977 , Zm00025a053432
Brachypodium KQJ82290 , KQJ96875 , KQK23609 , PNT78181 , KQJ81970 , PNT60922
Barley HORVU2Hr1G070160.1 , HORVU2Hr1G070140.2 , HORVU2Hr1G070140.3 , HORVU2Hr1G070140.1 , HORVU2Hr1G070140.6 , HORVU2Hr1G070140.7 , HORVU2Hr1G070140.4 , HORVU2Hr1G070140.5 , HORVU5Hr1G125030.5 , HORVU2Hr1G011060.1 , HORVU1Hr1G036920.1 , HORVU5Hr1G125030.4 , HORVU5Hr1G125030.6 , HORVU5Hr1G125030.1 , HORVU5Hr1G125030.2 , HORVU5Hr1G125030.3
Wheat TraesCS2A02G284500 , TraesCS1A02G139900 , TraesCS1A02G139900 , TraesCS2B02G077100 , TraesCS2B02G301600 , TraesCS2B02G301600 , TraesCS1D02G139400 , TraesCS1B02G157000
Populus -


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cDNA sequences
Sobic.006G053000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G229600 serine/threonine-protein kinase receptor precursor, putative, expressed -
2 Sobic.002G271900 EAP30/Vps36 family domain containing protein, expressed K12188: SNF8, ESCRT-II complex subunit VPS22
3 Sobic.003G230300 expressed protein -
4 Sobic.010G155901 - -
5 Sobic.006G058300 expressed protein -
6 Sobic.003G400332 - -
7 Sobic.006G069050 - -
8 Sobic.003G149900 PPR repeat domain containing protein, putative, expressed -
9 Sobic.006G110600 - -
10 Sobic.004G152501 - -
11 Sobic.003G126400 expressed protein -
12 Sobic.006G257500 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
13 Sobic.004G012100 basic helix-loop-helix DND-binding domain containing protein, expressed -
14 Sobic.004G236500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutaredoxin, putative, expressed K17479: glutaredoxin domain-containing cysteine-rich protein 1
15 Sobic.003G038300 - -
16 Sobic.001G407000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ proteins of unknown function domain containing protein, putative, expressed -
17 Sobic.007G174100 carrier, putative, expressed -
18 Sobic.002G326200 TKL_IRAK_DUF26-la.4 - DUF26 kinases have homology to DUF26 containing loci, expressed -
19 Sobic.009G258150 - -
20 Sobic.010G132300 CDK5RAP3, putative, expressed -


Gene co-expression network
sample Sobic006G053000 Sobic006G053000 Sobic006G229600 Sobic006G229600 Sobic006G053000--Sobic006G229600 Sobic002G271900 Sobic002G271900 Sobic006G053000--Sobic002G271900 Sobic003G230300 Sobic003G230300 Sobic006G053000--Sobic003G230300 Sobic010G155901 Sobic010G155901 Sobic006G053000--Sobic010G155901 Sobic006G058300 Sobic006G058300 Sobic006G053000--Sobic006G058300 Sobic003G400332 Sobic003G400332 Sobic006G053000--Sobic003G400332 Sobic006G069050 Sobic006G069050 Sobic006G053000--Sobic006G069050 Sobic003G149900 Sobic003G149900 Sobic006G053000--Sobic003G149900 Sobic006G110600 Sobic006G110600 Sobic006G053000--Sobic006G110600 Sobic006G229600--Sobic002G271900 Sobic006G229600--Sobic006G069050 Sobic009G258150 Sobic009G258150 Sobic006G229600--Sobic009G258150 Sobic004G012100 Sobic004G012100 Sobic006G229600--Sobic004G012100 Sobic004G152501 Sobic004G152501 Sobic006G229600--Sobic004G152501 Sobic006G229600--Sobic006G058300 Sobic003G126400 Sobic003G126400 Sobic006G229600--Sobic003G126400 Sobic002G133600 Sobic002G133600 Sobic006G229600--Sobic002G133600 Sobic010G257300 Sobic010G257300 Sobic006G229600--Sobic010G257300 Sobic002G271900--Sobic006G229600 Sobic009G004300 Sobic009G004300 Sobic002G271900--Sobic009G004300 Sobic002G326200 Sobic002G326200 Sobic002G271900--Sobic002G326200 Sobic002G271900--Sobic002G133600 Sobic002G271900--Sobic006G110600 Sobic002G271900--Sobic006G058300 Sobic002G271900--Sobic004G012100 Sobic002G271900--Sobic010G155901 Sobic002G271900--Sobic009G258150 Sobic001G407000 Sobic001G407000 Sobic003G230300--Sobic001G407000 Sobic003G230300--Sobic006G053000 Sobic008G020300 Sobic008G020300 Sobic003G230300--Sobic008G020300 Sobic003G105300 Sobic003G105300 Sobic003G230300--Sobic003G105300 Sobic006G257500 Sobic006G257500 Sobic003G230300--Sobic006G257500 Sobic001G541900 Sobic001G541900 Sobic003G230300--Sobic001G541900 Sobic001G255700 Sobic001G255700 Sobic003G230300--Sobic001G255700 Sobic007G116600 Sobic007G116600 Sobic003G230300--Sobic007G116600 Sobic003G230300--Sobic006G058300 Sobic010G155901--Sobic003G400332 Sobic010G155901--Sobic006G058300 Sobic010G155901--Sobic001G407000 Sobic010G132300 Sobic010G132300 Sobic010G155901--Sobic010G132300 Sobic010G155901--Sobic008G020300 Sobic010G155901--Sobic003G149900 Sobic001G139750 Sobic001G139750 Sobic010G155901--Sobic001G139750 Sobic010G155901--Sobic001G541900 Sobic010G155901--Sobic003G105300 Sobic006G058300--Sobic003G149900 Sobic004G016600 Sobic004G016600 Sobic006G058300--Sobic004G016600 Sobic003G038300 Sobic003G038300 Sobic006G058300--Sobic003G038300 Sobic006G058300--Sobic003G126400 Sobic006G058300--Sobic006G069050 Sobic006G058300--Sobic008G020300 Sobic009G152901 Sobic009G152901 Sobic006G058300--Sobic009G152901 Sobic001G537900 Sobic001G537900 Sobic006G058300--Sobic001G537900 Sobic006G058300--Sobic001G407000 Sobic003G400332--Sobic010G155901 Sobic003G400332--Sobic001G139750 Sobic003G400332--Sobic006G058300 Sobic002G373200 Sobic002G373200 Sobic003G400332--Sobic002G373200 Sobic005G076100 Sobic005G076100 Sobic003G400332--Sobic005G076100 Sobic003G400332--Sobic003G149900 Sobic003G400332--Sobic001G407000 Sobic003G400332--Sobic010G132300 Sobic003G400332--Sobic001G541900 Sobic006G069050--Sobic003G126400 Sobic006G069050--Sobic003G038300 Sobic006G069050--Sobic004G152501 Sobic001G115900 Sobic001G115900 Sobic006G069050--Sobic001G115900 Sobic003G065001 Sobic003G065001 Sobic006G069050--Sobic003G065001 Sobic006G069050--Sobic006G058300 Sobic010G201000 Sobic010G201000 Sobic006G069050--Sobic010G201000 Sobic003G167825 Sobic003G167825 Sobic006G069050--Sobic003G167825 Sobic010G074980 Sobic010G074980 Sobic006G069050--Sobic010G074980 Sobic003G149900--Sobic006G058300 Sobic003G149900--Sobic009G152901 Sobic003G149900--Sobic001G537900 Sobic003G149900--Sobic008G020300 Sobic003G149900--Sobic004G016600 Sobic004G354800 Sobic004G354800 Sobic003G149900--Sobic004G354800 Sobic001G016900 Sobic001G016900 Sobic003G149900--Sobic001G016900 Sobic001G120100 Sobic001G120100 Sobic003G149900--Sobic001G120100 Sobic003G149900--Sobic003G038300 Sobic006G110600--Sobic002G271900 Sobic001G212701 Sobic001G212701 Sobic006G110600--Sobic001G212701 Sobic003G313700 Sobic003G313700 Sobic006G110600--Sobic003G313700 Sobic006G110600--Sobic010G132300 Sobic006G110600--Sobic002G326200 Sobic006G110600--Sobic006G229600 Sobic004G314750 Sobic004G314750 Sobic006G110600--Sobic004G314750 Sobic006G110600--Sobic002G133600 Sobic007G174100 Sobic007G174100 Sobic006G110600--Sobic007G174100
Octagon: transcription factors


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