Gene annotation
Transcriptome id Sobic.003G230300.1
Synonym Sb03g028830
Functional annotation expressed protein
UniProt A0A1B6Q4X9
Pfam -
Panther DB PTHR33640 PTHR33640:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os05g50470.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G230300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G407000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ proteins of unknown function domain containing protein, putative, expressed -
2 Sobic.006G053000 heavy metal-associated domain containing protein, expressed -
3 Sobic.008G020300 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
4 Sobic.003G105300 - -
5 Sobic.006G257500 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
6 Sobic.001G541900 "similar to Nitrate/chlorate transporter, putative, expressed"(PubMedID : 29862293)@peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
7 Sobic.001G255700 - -
8 Sobic.007G116600 5-AMP-activated protein kinase beta-1 subunit-related, putative, expressed -
9 Sobic.006G058300 expressed protein -
10 Sobic.002G284800 expressed protein -
11 Sobic.001G537900 AGAP010609-PA, putative, expressed K17867: DPH4, diphthamide biosynthesis protein 4
12 Sobic.003G368150 - -
13 Sobic.010G155901 - -
14 Sobic.009G163500 - -
15 Sobic.004G197300 - -
16 Sobic.003G109400 - -
17 Sobic.007G001300 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
18 Sobic.004G239000 - -
19 Sobic.008G133100 OsWAK13 - OsWAK receptor-like protein kinase, expressed -
20 Sobic.001G441800 hydroxyproline-rich glycoprotein family protein, putative, expressed -


Gene co-expression network
sample Sobic003G230300 Sobic003G230300 Sobic001G407000 Sobic001G407000 Sobic003G230300--Sobic001G407000 Sobic006G053000 Sobic006G053000 Sobic003G230300--Sobic006G053000 Sobic008G020300 Sobic008G020300 Sobic003G230300--Sobic008G020300 Sobic003G105300 Sobic003G105300 Sobic003G230300--Sobic003G105300 Sobic006G257500 Sobic006G257500 Sobic003G230300--Sobic006G257500 Sobic001G541900 Sobic001G541900 Sobic003G230300--Sobic001G541900 Sobic001G255700 Sobic001G255700 Sobic003G230300--Sobic001G255700 Sobic007G116600 Sobic007G116600 Sobic003G230300--Sobic007G116600 Sobic006G058300 Sobic006G058300 Sobic003G230300--Sobic006G058300 Sobic001G407000--Sobic003G105300 Sobic001G407000--Sobic008G020300 Sobic001G407000--Sobic001G255700 Sobic001G407000--Sobic001G541900 Sobic002G284800 Sobic002G284800 Sobic001G407000--Sobic002G284800 Sobic003G368150 Sobic003G368150 Sobic001G407000--Sobic003G368150 Sobic009G163500 Sobic009G163500 Sobic001G407000--Sobic009G163500 Sobic010G224800 Sobic010G224800 Sobic001G407000--Sobic010G224800 Sobic001G537900 Sobic001G537900 Sobic001G407000--Sobic001G537900 Sobic006G229600 Sobic006G229600 Sobic006G053000--Sobic006G229600 Sobic002G271900 Sobic002G271900 Sobic006G053000--Sobic002G271900 Sobic006G053000--Sobic003G230300 Sobic010G155901 Sobic010G155901 Sobic006G053000--Sobic010G155901 Sobic006G053000--Sobic006G058300 Sobic003G400332 Sobic003G400332 Sobic006G053000--Sobic003G400332 Sobic006G069050 Sobic006G069050 Sobic006G053000--Sobic006G069050 Sobic003G149900 Sobic003G149900 Sobic006G053000--Sobic003G149900 Sobic006G110600 Sobic006G110600 Sobic006G053000--Sobic006G110600 Sobic008G020300--Sobic001G537900 Sobic008G020300--Sobic003G105300 Sobic008G020300--Sobic001G407000 Sobic003G109400 Sobic003G109400 Sobic008G020300--Sobic003G109400 Sobic008G020300--Sobic001G255700 Sobic008G020300--Sobic009G163500 Sobic004G197300 Sobic004G197300 Sobic008G020300--Sobic004G197300 Sobic004G354800 Sobic004G354800 Sobic008G020300--Sobic004G354800 Sobic007G001300 Sobic007G001300 Sobic008G020300--Sobic007G001300 Sobic003G105300--Sobic001G407000 Sobic003G105300--Sobic008G020300 Sobic003G105300--Sobic001G255700 Sobic003G105300--Sobic002G284800 Sobic003G105300--Sobic003G368150 Sobic003G105300--Sobic009G163500 Sobic003G105300--Sobic004G197300 Sobic003G105300--Sobic003G109400 Sobic003G105300--Sobic001G537900 Sobic006G257500--Sobic006G058300 Sobic004G188701 Sobic004G188701 Sobic006G257500--Sobic004G188701 Sobic006G257500--Sobic008G020300 Sobic003G038300 Sobic003G038300 Sobic006G257500--Sobic003G038300 Sobic002G158600 Sobic002G158600 Sobic006G257500--Sobic002G158600 Sobic006G257500--Sobic007G116600 Sobic010G201000 Sobic010G201000 Sobic006G257500--Sobic010G201000 Sobic006G257500--Sobic001G407000 Sobic004G152501 Sobic004G152501 Sobic006G257500--Sobic004G152501 Sobic001G541900--Sobic001G407000 Sobic001G541900--Sobic008G020300 Sobic001G541900--Sobic001G537900 Sobic001G541900--Sobic009G163500 Sobic001G541900--Sobic004G354800 Sobic001G541900--Sobic003G105300 Sobic001G541900--Sobic004G197300 Sobic001G541900--Sobic001G255700 Sobic009G082400 Sobic009G082400 Sobic001G541900--Sobic009G082400 Sobic001G255700--Sobic002G284800 Sobic001G255700--Sobic003G368150 Sobic008G131800 Sobic008G131800 Sobic001G255700--Sobic008G131800 Sobic004G239000 Sobic004G239000 Sobic001G255700--Sobic004G239000 Sobic008G133100 Sobic008G133100 Sobic001G255700--Sobic008G133100 Sobic001G255700--Sobic003G105300 Sobic001G255700--Sobic004G197300 Sobic010G179150 Sobic010G179150 Sobic001G255700--Sobic010G179150 Sobic001G255700--Sobic009G163500 Sobic007G111600 Sobic007G111600 Sobic007G116600--Sobic007G111600 Sobic007G013100 Sobic007G013100 Sobic007G116600--Sobic007G013100 Sobic003G099500 Sobic003G099500 Sobic007G116600--Sobic003G099500 Sobic001G016900 Sobic001G016900 Sobic007G116600--Sobic001G016900 Sobic007G204500 Sobic007G204500 Sobic007G116600--Sobic007G204500 Sobic007G116600--Sobic004G239000 Sobic007G116600--Sobic008G131800 Sobic007G116600--Sobic010G179150 Sobic004G251350 Sobic004G251350 Sobic007G116600--Sobic004G251350 Sobic006G058300--Sobic003G149900 Sobic004G016600 Sobic004G016600 Sobic006G058300--Sobic004G016600 Sobic006G058300--Sobic003G038300 Sobic003G126400 Sobic003G126400 Sobic006G058300--Sobic003G126400 Sobic006G058300--Sobic006G069050 Sobic006G058300--Sobic008G020300 Sobic009G152901 Sobic009G152901 Sobic006G058300--Sobic009G152901 Sobic006G058300--Sobic001G537900 Sobic006G058300--Sobic001G407000
Octagon: transcription factors


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