Gene annotation
Transcriptome id Sobic.006G257500.1
Synonym Sb06g032090
Functional annotation flavonol synthase/flavanone 3-hydroxylase, putative, expressed
UniProt A0A1B6PNX5
Pfam PF03171 PF14226
Panther DB PTHR10209 PTHR10209:SF159
NCBI CDD KOG0143; Iron/ascorbate family oxidoreductases
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT3G60290 : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
RAP-DB (Rice) LOC_Os04g57180.1 : flavonol synthase/flavanone 3-hydroxylase, putative, expressed
MaizeGDB (Corn) Zm00025a009390
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.006G257500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G058300 expressed protein -
2 Sobic.004G188701 - -
3 Sobic.008G020300 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
4 Sobic.003G038300 - -
5 Sobic.002G158600 - -
6 Sobic.007G116600 5-AMP-activated protein kinase beta-1 subunit-related, putative, expressed -
7 Sobic.010G201000 - -
8 Sobic.001G407000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ proteins of unknown function domain containing protein, putative, expressed -
9 Sobic.004G152501 - -
10 Sobic.001G255700 - -
11 Sobic.004G016600 GDSL-like lipase/acylhydrolase, putative, expressed -
12 Sobic.007G013100 OsFBX142 - F-box domain containing protein, expressed -
13 Sobic.003G008850 - -
14 Sobic.003G105300 - -
15 Sobic.001G541900 "similar to Nitrate/chlorate transporter, putative, expressed"(PubMedID : 29862293)@peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
16 Sobic.003G126400 expressed protein -
17 Sobic.006G094400 - -
18 Sobic.008G164525 - -
19 Sobic.003G368150 - -
20 Sobic.009G152901 - -


Gene co-expression network
sample Sobic006G257500 Sobic006G257500 Sobic006G058300 Sobic006G058300 Sobic006G257500--Sobic006G058300 Sobic004G188701 Sobic004G188701 Sobic006G257500--Sobic004G188701 Sobic008G020300 Sobic008G020300 Sobic006G257500--Sobic008G020300 Sobic003G038300 Sobic003G038300 Sobic006G257500--Sobic003G038300 Sobic002G158600 Sobic002G158600 Sobic006G257500--Sobic002G158600 Sobic007G116600 Sobic007G116600 Sobic006G257500--Sobic007G116600 Sobic010G201000 Sobic010G201000 Sobic006G257500--Sobic010G201000 Sobic001G407000 Sobic001G407000 Sobic006G257500--Sobic001G407000 Sobic004G152501 Sobic004G152501 Sobic006G257500--Sobic004G152501 Sobic003G149900 Sobic003G149900 Sobic006G058300--Sobic003G149900 Sobic004G016600 Sobic004G016600 Sobic006G058300--Sobic004G016600 Sobic006G058300--Sobic003G038300 Sobic003G126400 Sobic003G126400 Sobic006G058300--Sobic003G126400 Sobic006G069050 Sobic006G069050 Sobic006G058300--Sobic006G069050 Sobic006G058300--Sobic008G020300 Sobic009G152901 Sobic009G152901 Sobic006G058300--Sobic009G152901 Sobic001G537900 Sobic001G537900 Sobic006G058300--Sobic001G537900 Sobic006G058300--Sobic001G407000 Sobic004G188701--Sobic006G257500 Sobic004G188701--Sobic008G020300 Sobic004G188701--Sobic006G058300 Sobic003G008850 Sobic003G008850 Sobic004G188701--Sobic003G008850 Sobic004G188701--Sobic001G407000 Sobic003G105300 Sobic003G105300 Sobic004G188701--Sobic003G105300 Sobic001G145300 Sobic001G145300 Sobic004G188701--Sobic001G145300 Sobic004G188701--Sobic001G537900 Sobic004G188701--Sobic003G038300 Sobic008G020300--Sobic001G537900 Sobic008G020300--Sobic003G105300 Sobic008G020300--Sobic001G407000 Sobic003G109400 Sobic003G109400 Sobic008G020300--Sobic003G109400 Sobic001G255700 Sobic001G255700 Sobic008G020300--Sobic001G255700 Sobic009G163500 Sobic009G163500 Sobic008G020300--Sobic009G163500 Sobic004G197300 Sobic004G197300 Sobic008G020300--Sobic004G197300 Sobic004G354800 Sobic004G354800 Sobic008G020300--Sobic004G354800 Sobic007G001300 Sobic007G001300 Sobic008G020300--Sobic007G001300 Sobic003G038300--Sobic003G126400 Sobic003G167825 Sobic003G167825 Sobic003G038300--Sobic003G167825 Sobic009G085600 Sobic009G085600 Sobic003G038300--Sobic009G085600 Sobic003G038300--Sobic006G069050 Sobic001G115900 Sobic001G115900 Sobic003G038300--Sobic001G115900 Sobic003G038300--Sobic004G016600 Sobic003G038300--Sobic010G201000 Sobic001G016900 Sobic001G016900 Sobic003G038300--Sobic001G016900 Sobic003G038300--Sobic004G152501 Sobic003G427500 Sobic003G427500 Sobic002G158600--Sobic003G427500 Sobic002G158600--Sobic003G038300 Sobic002G158600--Sobic010G201000 Sobic010G074980 Sobic010G074980 Sobic002G158600--Sobic010G074980 Sobic002G158600--Sobic004G152501 Sobic004G082151 Sobic004G082151 Sobic002G158600--Sobic004G082151 Sobic002G158600--Sobic003G126400 Sobic002G158600--Sobic003G167825 Sobic003G065001 Sobic003G065001 Sobic002G158600--Sobic003G065001 Sobic007G111600 Sobic007G111600 Sobic007G116600--Sobic007G111600 Sobic007G013100 Sobic007G013100 Sobic007G116600--Sobic007G013100 Sobic003G099500 Sobic003G099500 Sobic007G116600--Sobic003G099500 Sobic007G116600--Sobic001G016900 Sobic007G204500 Sobic007G204500 Sobic007G116600--Sobic007G204500 Sobic004G239000 Sobic004G239000 Sobic007G116600--Sobic004G239000 Sobic008G131800 Sobic008G131800 Sobic007G116600--Sobic008G131800 Sobic010G179150 Sobic010G179150 Sobic007G116600--Sobic010G179150 Sobic004G251350 Sobic004G251350 Sobic007G116600--Sobic004G251350 Sobic003G367401 Sobic003G367401 Sobic010G201000--Sobic003G367401 Sobic007G093400 Sobic007G093400 Sobic010G201000--Sobic007G093400 Sobic002G430200 Sobic002G430200 Sobic010G201000--Sobic002G430200 Sobic010G201000--Sobic010G074980 Sobic001G525000 Sobic001G525000 Sobic010G201000--Sobic001G525000 Sobic002G387100 Sobic002G387100 Sobic010G201000--Sobic002G387100 Sobic003G120400 Sobic003G120400 Sobic010G201000--Sobic003G120400 Sobic010G201000--Sobic001G016900 Sobic010G201000--Sobic003G099500 Sobic001G407000--Sobic003G105300 Sobic001G407000--Sobic008G020300 Sobic001G407000--Sobic001G255700 Sobic001G541900 Sobic001G541900 Sobic001G407000--Sobic001G541900 Sobic002G284800 Sobic002G284800 Sobic001G407000--Sobic002G284800 Sobic003G368150 Sobic003G368150 Sobic001G407000--Sobic003G368150 Sobic001G407000--Sobic009G163500 Sobic010G224800 Sobic010G224800 Sobic001G407000--Sobic010G224800 Sobic001G407000--Sobic001G537900 Sobic004G152501--Sobic006G069050 Sobic004G152501--Sobic003G038300 Sobic004G152501--Sobic003G126400 Sobic004G152501--Sobic010G201000 Sobic004G152501--Sobic010G074980 Sobic004G152501--Sobic001G115900 Sobic004G152501--Sobic004G082151 Sobic004G152501--Sobic003G427500 Sobic009G258150 Sobic009G258150 Sobic004G152501--Sobic009G258150
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.