Gene annotation
Transcriptome id Sobic.004G188701.1
Synonym -
Functional annotation -
UniProt A0A1Z5RN62
Pfam PF07690
Panther DB PTHR23500 PTHR23500:SF126
NCBI CDD KOG0254; Predicted transporter (major facilitator superfamily)
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT1G34580 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os02g36414.1 : transporter family protein, putative, expressed
MaizeGDB (Corn) Zm00025a046980 , Zm00025a020787 , Zm00025a031705
Brachypodium KQJ82921 , KQJ95161 , KQJ82916 , KQJ82915 , KQJ82919 , KQK20404 , KQJ99960 , KQJ90241 , KQK00003 , KQK00004
Barley HORVU1Hr1G075970.6 , HORVU1Hr1G075970.5 , HORVU1Hr1G075970.4 , HORVU1Hr1G075970.3 , HORVU1Hr1G075970.2 , HORVU1Hr1G075970.1 , HORVU1Hr1G013480.5 , HORVU1Hr1G013480.4 , HORVU1Hr1G013480.3 , HORVU1Hr1G013480.2 , HORVU1Hr1G013480.1 , HORVU5Hr1G065630.1 , HORVU5Hr1G065630.3 , HORVU5Hr1G065630.2 , HORVU5Hr1G065630.5 , HORVU5Hr1G065630.4
Wheat TraesCS6A02G231700 , TraesCS1D02G343200 , TraesCS1A02G341100 , TraesCS1A02G064900 , TraesCS1A02G064900 , TraesCS5D02G549900 , TraesCS5D02G234100 , TraesCS5B02G225100 , TraesCS5A02G226800 , TraesCS5B02G225400 , TraesCS5B02G225300 , TraesCS5A02G226500 , TraesCS1D02G065700 , TraesCS4A02G314900 , TraesCS5D02G233900 , TraesCS5D02G234200 , TraesCS5A02G226700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G257500 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
2 Sobic.008G020300 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
3 Sobic.006G058300 expressed protein -
4 Sobic.003G008850 - -
5 Sobic.001G407000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ proteins of unknown function domain containing protein, putative, expressed -
6 Sobic.003G105300 - -
7 Sobic.001G145300 - -
8 Sobic.001G537900 AGAP010609-PA, putative, expressed K17867: DPH4, diphthamide biosynthesis protein 4
9 Sobic.003G038300 - -
10 Sobic.001G255700 - -
11 Sobic.007G116600 5-AMP-activated protein kinase beta-1 subunit-related, putative, expressed -
12 Sobic.004G016600 GDSL-like lipase/acylhydrolase, putative, expressed -
13 Sobic.003G149900 PPR repeat domain containing protein, putative, expressed -
14 Sobic.001G541900 "similar to Nitrate/chlorate transporter, putative, expressed"(PubMedID : 29862293)@peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
15 Sobic.007G013100 OsFBX142 - F-box domain containing protein, expressed -
16 Sobic.008G164525 - -
17 Sobic.006G094400 - -
18 Sobic.010G132300 CDK5RAP3, putative, expressed -
19 Sobic.010G155901 - -
20 Sobic.009G152901 - -


Gene co-expression network
sample Sobic004G188701 Sobic004G188701 Sobic006G257500 Sobic006G257500 Sobic004G188701--Sobic006G257500 Sobic008G020300 Sobic008G020300 Sobic004G188701--Sobic008G020300 Sobic006G058300 Sobic006G058300 Sobic004G188701--Sobic006G058300 Sobic003G008850 Sobic003G008850 Sobic004G188701--Sobic003G008850 Sobic001G407000 Sobic001G407000 Sobic004G188701--Sobic001G407000 Sobic003G105300 Sobic003G105300 Sobic004G188701--Sobic003G105300 Sobic001G145300 Sobic001G145300 Sobic004G188701--Sobic001G145300 Sobic001G537900 Sobic001G537900 Sobic004G188701--Sobic001G537900 Sobic003G038300 Sobic003G038300 Sobic004G188701--Sobic003G038300 Sobic006G257500--Sobic006G058300 Sobic006G257500--Sobic004G188701 Sobic006G257500--Sobic008G020300 Sobic006G257500--Sobic003G038300 Sobic002G158600 Sobic002G158600 Sobic006G257500--Sobic002G158600 Sobic007G116600 Sobic007G116600 Sobic006G257500--Sobic007G116600 Sobic010G201000 Sobic010G201000 Sobic006G257500--Sobic010G201000 Sobic006G257500--Sobic001G407000 Sobic004G152501 Sobic004G152501 Sobic006G257500--Sobic004G152501 Sobic008G020300--Sobic001G537900 Sobic008G020300--Sobic003G105300 Sobic008G020300--Sobic001G407000 Sobic003G109400 Sobic003G109400 Sobic008G020300--Sobic003G109400 Sobic001G255700 Sobic001G255700 Sobic008G020300--Sobic001G255700 Sobic009G163500 Sobic009G163500 Sobic008G020300--Sobic009G163500 Sobic004G197300 Sobic004G197300 Sobic008G020300--Sobic004G197300 Sobic004G354800 Sobic004G354800 Sobic008G020300--Sobic004G354800 Sobic007G001300 Sobic007G001300 Sobic008G020300--Sobic007G001300 Sobic003G149900 Sobic003G149900 Sobic006G058300--Sobic003G149900 Sobic004G016600 Sobic004G016600 Sobic006G058300--Sobic004G016600 Sobic006G058300--Sobic003G038300 Sobic003G126400 Sobic003G126400 Sobic006G058300--Sobic003G126400 Sobic006G069050 Sobic006G069050 Sobic006G058300--Sobic006G069050 Sobic006G058300--Sobic008G020300 Sobic009G152901 Sobic009G152901 Sobic006G058300--Sobic009G152901 Sobic006G058300--Sobic001G537900 Sobic006G058300--Sobic001G407000 Sobic003G008850--Sobic001G537900 Sobic001G120100 Sobic001G120100 Sobic003G008850--Sobic001G120100 Sobic006G256801 Sobic006G256801 Sobic003G008850--Sobic006G256801 Sobic003G008850--Sobic004G016600 Sobic003G008850--Sobic008G020300 Sobic008G164525 Sobic008G164525 Sobic003G008850--Sobic008G164525 Sobic007G204500 Sobic007G204500 Sobic003G008850--Sobic007G204500 Sobic008G119000 Sobic008G119000 Sobic003G008850--Sobic008G119000 Sobic004G251350 Sobic004G251350 Sobic003G008850--Sobic004G251350 Sobic001G407000--Sobic003G105300 Sobic001G407000--Sobic008G020300 Sobic001G407000--Sobic001G255700 Sobic001G541900 Sobic001G541900 Sobic001G407000--Sobic001G541900 Sobic002G284800 Sobic002G284800 Sobic001G407000--Sobic002G284800 Sobic003G368150 Sobic003G368150 Sobic001G407000--Sobic003G368150 Sobic001G407000--Sobic009G163500 Sobic010G224800 Sobic010G224800 Sobic001G407000--Sobic010G224800 Sobic001G407000--Sobic001G537900 Sobic003G105300--Sobic001G407000 Sobic003G105300--Sobic008G020300 Sobic003G105300--Sobic001G255700 Sobic003G105300--Sobic002G284800 Sobic003G105300--Sobic003G368150 Sobic003G105300--Sobic009G163500 Sobic003G105300--Sobic004G197300 Sobic003G105300--Sobic003G109400 Sobic003G105300--Sobic001G537900 Sobic006G172651 Sobic006G172651 Sobic001G145300--Sobic006G172651 Sobic001G261440 Sobic001G261440 Sobic001G145300--Sobic001G261440 Sobic002G156300 Sobic002G156300 Sobic001G145300--Sobic002G156300 Sobic009G127600 Sobic009G127600 Sobic001G145300--Sobic009G127600 Sobic001G145300--Sobic008G020300 Sobic001G145300--Sobic003G109400 Sobic010G114400 Sobic010G114400 Sobic001G145300--Sobic010G114400 Sobic001G145300--Sobic007G001300 Sobic003G136700 Sobic003G136700 Sobic001G145300--Sobic003G136700 Sobic001G537900--Sobic008G020300 Sobic001G537900--Sobic001G120100 Sobic010G179150 Sobic010G179150 Sobic001G537900--Sobic010G179150 Sobic001G537900--Sobic004G354800 Sobic001G537900--Sobic004G251350 Sobic001G537900--Sobic004G197300 Sobic001G537900--Sobic009G163500 Sobic001G537900--Sobic003G008850 Sobic007G111600 Sobic007G111600 Sobic001G537900--Sobic007G111600 Sobic003G038300--Sobic003G126400 Sobic003G167825 Sobic003G167825 Sobic003G038300--Sobic003G167825 Sobic009G085600 Sobic009G085600 Sobic003G038300--Sobic009G085600 Sobic003G038300--Sobic006G069050 Sobic001G115900 Sobic001G115900 Sobic003G038300--Sobic001G115900 Sobic003G038300--Sobic004G016600 Sobic003G038300--Sobic010G201000 Sobic001G016900 Sobic001G016900 Sobic003G038300--Sobic001G016900 Sobic003G038300--Sobic004G152501
Octagon: transcription factors


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