Gene annotation
Transcriptome id Sobic.004G236500.1
Synonym Sb04g027900
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
glutaredoxin, putative, expressed
UniProt C5XYS2
Pfam PF00462
Panther DB PTHR10168 PTHR10168:SF82
NCBI CDD KOG1752; Glutaredoxin and related proteins
KEGG Orthology K17479; glutaredoxin domain-containing cysteine-rich protein 1
Gene Ontology GO:0015035; protein disulfide oxidoreductase activity GO:0009055electron transfer activity


Orthologs (automatic annotation)
TAIR AT5G39865 : Glutaredoxin family protein
RAP-DB (Rice) LOC_Os02g51370.1 : glutaredoxin, putative, expressed
MaizeGDB (Corn) Zm00025a042591 , Zm00025a022099 , Zm00025a033192
Brachypodium KQK18889 , KQK01926
Barley HORVU7Hr1G038000.2 , HORVU7Hr1G038000.3 , HORVU0Hr1G017160.1 , HORVU7Hr1G038000.1 , HORVU7Hr1G038000.4 , HORVU7Hr1G038000.5
Wheat -
Populus -


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cDNA sequences
Sobic.004G236500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G257500 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
2 Sobic.008G020300 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
3 Sobic.003G008850 - -
4 Sobic.010G155901 - -
5 Sobic.001G145300 - -
6 Sobic.010G132300 CDK5RAP3, putative, expressed -
7 Sobic.006G094400 - -
8 Sobic.001G407000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ proteins of unknown function domain containing protein, putative, expressed -
9 Sobic.002G284701 - -
10 Sobic.006G058300 expressed protein -
11 Sobic.004G160950 - -
12 Sobic.001G541900 "similar to Nitrate/chlorate transporter, putative, expressed"(PubMedID : 29862293)@peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
13 Sobic.001G537900 AGAP010609-PA, putative, expressed K17867: DPH4, diphthamide biosynthesis protein 4
14 Sobic.003G105300 - -
15 Sobic.003G101600 - -
16 Sobic.006G256801 - -
17 Sobic.009G127600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide-like helical, putative, expressed -
18 Sobic.008G164525 - -
19 Sobic.006G110600 - -
20 Sobic.006G187600 DUF623 domain containing protein, expressed -


Gene co-expression network
sample Sobic004G236500 Sobic004G236500 Sobic006G257500 Sobic006G257500 Sobic004G236500--Sobic006G257500 Sobic008G020300 Sobic008G020300 Sobic004G236500--Sobic008G020300 Sobic003G008850 Sobic003G008850 Sobic004G236500--Sobic003G008850 Sobic010G155901 Sobic010G155901 Sobic004G236500--Sobic010G155901 Sobic001G145300 Sobic001G145300 Sobic004G236500--Sobic001G145300 Sobic010G132300 Sobic010G132300 Sobic004G236500--Sobic010G132300 Sobic006G094400 Sobic006G094400 Sobic004G236500--Sobic006G094400 Sobic001G407000 Sobic001G407000 Sobic004G236500--Sobic001G407000 Sobic002G284701 Sobic002G284701 Sobic004G236500--Sobic002G284701 Sobic006G058300 Sobic006G058300 Sobic006G257500--Sobic006G058300 Sobic004G188701 Sobic004G188701 Sobic006G257500--Sobic004G188701 Sobic006G257500--Sobic008G020300 Sobic003G038300 Sobic003G038300 Sobic006G257500--Sobic003G038300 Sobic002G158600 Sobic002G158600 Sobic006G257500--Sobic002G158600 Sobic007G116600 Sobic007G116600 Sobic006G257500--Sobic007G116600 Sobic010G201000 Sobic010G201000 Sobic006G257500--Sobic010G201000 Sobic006G257500--Sobic001G407000 Sobic004G152501 Sobic004G152501 Sobic006G257500--Sobic004G152501 Sobic001G537900 Sobic001G537900 Sobic008G020300--Sobic001G537900 Sobic003G105300 Sobic003G105300 Sobic008G020300--Sobic003G105300 Sobic008G020300--Sobic001G407000 Sobic003G109400 Sobic003G109400 Sobic008G020300--Sobic003G109400 Sobic001G255700 Sobic001G255700 Sobic008G020300--Sobic001G255700 Sobic009G163500 Sobic009G163500 Sobic008G020300--Sobic009G163500 Sobic004G197300 Sobic004G197300 Sobic008G020300--Sobic004G197300 Sobic004G354800 Sobic004G354800 Sobic008G020300--Sobic004G354800 Sobic007G001300 Sobic007G001300 Sobic008G020300--Sobic007G001300 Sobic003G008850--Sobic001G537900 Sobic001G120100 Sobic001G120100 Sobic003G008850--Sobic001G120100 Sobic006G256801 Sobic006G256801 Sobic003G008850--Sobic006G256801 Sobic004G016600 Sobic004G016600 Sobic003G008850--Sobic004G016600 Sobic003G008850--Sobic008G020300 Sobic008G164525 Sobic008G164525 Sobic003G008850--Sobic008G164525 Sobic007G204500 Sobic007G204500 Sobic003G008850--Sobic007G204500 Sobic008G119000 Sobic008G119000 Sobic003G008850--Sobic008G119000 Sobic004G251350 Sobic004G251350 Sobic003G008850--Sobic004G251350 Sobic003G400332 Sobic003G400332 Sobic010G155901--Sobic003G400332 Sobic010G155901--Sobic006G058300 Sobic010G155901--Sobic001G407000 Sobic010G155901--Sobic010G132300 Sobic010G155901--Sobic008G020300 Sobic003G149900 Sobic003G149900 Sobic010G155901--Sobic003G149900 Sobic001G139750 Sobic001G139750 Sobic010G155901--Sobic001G139750 Sobic001G541900 Sobic001G541900 Sobic010G155901--Sobic001G541900 Sobic010G155901--Sobic003G105300 Sobic006G172651 Sobic006G172651 Sobic001G145300--Sobic006G172651 Sobic001G261440 Sobic001G261440 Sobic001G145300--Sobic001G261440 Sobic002G156300 Sobic002G156300 Sobic001G145300--Sobic002G156300 Sobic009G127600 Sobic009G127600 Sobic001G145300--Sobic009G127600 Sobic001G145300--Sobic008G020300 Sobic001G145300--Sobic003G109400 Sobic010G114400 Sobic010G114400 Sobic001G145300--Sobic010G114400 Sobic001G145300--Sobic007G001300 Sobic003G136700 Sobic003G136700 Sobic001G145300--Sobic003G136700 Sobic007G174100 Sobic007G174100 Sobic010G132300--Sobic007G174100 Sobic004G160950 Sobic004G160950 Sobic010G132300--Sobic004G160950 Sobic010G132300--Sobic010G155901 Sobic001G212701 Sobic001G212701 Sobic010G132300--Sobic001G212701 Sobic005G076100 Sobic005G076100 Sobic010G132300--Sobic005G076100 Sobic002G114600 Sobic002G114600 Sobic010G132300--Sobic002G114600 Sobic010G132300--Sobic003G008850 Sobic002G373200 Sobic002G373200 Sobic010G132300--Sobic002G373200 Sobic002G165401 Sobic002G165401 Sobic010G132300--Sobic002G165401 Sobic006G094400--Sobic006G256801 Sobic001G434450 Sobic001G434450 Sobic006G094400--Sobic001G434450 Sobic006G094400--Sobic008G164525 Sobic004G314750 Sobic004G314750 Sobic006G094400--Sobic004G314750 Sobic006G180500 Sobic006G180500 Sobic006G094400--Sobic006G180500 Sobic004G001900 Sobic004G001900 Sobic006G094400--Sobic004G001900 Sobic009G094000 Sobic009G094000 Sobic006G094400--Sobic009G094000 Sobic006G094400--Sobic002G165401 Sobic006G094400--Sobic003G008850 Sobic001G407000--Sobic003G105300 Sobic001G407000--Sobic008G020300 Sobic001G407000--Sobic001G255700 Sobic001G407000--Sobic001G541900 Sobic002G284800 Sobic002G284800 Sobic001G407000--Sobic002G284800 Sobic003G368150 Sobic003G368150 Sobic001G407000--Sobic003G368150 Sobic001G407000--Sobic009G163500 Sobic010G224800 Sobic010G224800 Sobic001G407000--Sobic010G224800 Sobic001G407000--Sobic001G537900 Sobic002G284701--Sobic001G145300 Sobic003G119266 Sobic003G119266 Sobic002G284701--Sobic003G119266 Sobic004G279150 Sobic004G279150 Sobic002G284701--Sobic004G279150 Sobic002G284701--Sobic004G160950 Sobic003G279600 Sobic003G279600 Sobic002G284701--Sobic003G279600 Sobic009G053201 Sobic009G053201 Sobic002G284701--Sobic009G053201 Sobic002G284701--Sobic010G132300 Sobic010G045300 Sobic010G045300 Sobic002G284701--Sobic010G045300 Sobic002G188100 Sobic002G188100 Sobic002G284701--Sobic002G188100
Octagon: transcription factors


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