Gene annotation
Transcriptome id Sobic.004G190300.1
Synonym Sb04g023840
Functional annotation expressed protein
UniProt A0A1Z5RP17
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g36690.1 : expressed protein
MaizeGDB (Corn) Zm00025a020800
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G190300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G210600 expressed protein -
2 Sobic.002G132201 - -
3 Sobic.010G215201 - -
4 Sobic.006G161200 cysteine-rich repeat secretory protein precursor, putative, expressed -
5 Sobic.005G073300 limonoid UDP-glucosyltransferase, putative, expressed -
6 Sobic.002G054800 "O2(Ortholog in maize:Hartings et al., 1989)"(PubMedID : 31659852)@bZIP transcription factor domain containing protein, expressed -
7 Sobic.003G149700 FAD dependent oxidoreductase domain containing protein, expressed K00306: sarcosine oxidase / L-pipecolate oxidase
8 Sobic.003G356500 "uncharacterized lipid transporters, up-regulated under drought stress, mapped into a QTL involved in pre-flowering drought tolerance (QSTG2_4)"(PubMedID : 24655390)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@LTPL101 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
9 Sobic.001G380100 DUF623 domain containing protein, expressed -
10 Sobic.003G281400 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA and BR treatments"(PubMedID : 20528920)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC transporter, ATP-binding protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
11 Sobic.009G022600 - -
12 Sobic.006G155400 expressed protein -
13 Sobic.010G083200 gibberellin receptor GID1L2, putative, expressed -
14 Sobic.002G280001 - -
15 Sobic.005G150250 - -
16 Sobic.001G071500 - -
17 Sobic.002G240200 expressed protein K19307: 25S rRNA (uracil2634-N3)-methyltransferase
18 Sobic.006G270300 Mlo family(PubMedID : 29491869)@MLO domain containing protein, putative, expressed K08472: mlo protein
19 Sobic.001G468900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@DUF623 domain containing protein, expressed -
20 Sobic.003G337900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transcription factor(PubMedID : 30367619)@WRKY21, expressed -


Gene co-expression network
sample Sobic004G190300 Sobic004G190300 Sobic006G210600 Sobic006G210600 Sobic004G190300--Sobic006G210600 Sobic002G132201 Sobic002G132201 Sobic004G190300--Sobic002G132201 Sobic010G215201 Sobic010G215201 Sobic004G190300--Sobic010G215201 Sobic006G161200 Sobic006G161200 Sobic004G190300--Sobic006G161200 Sobic005G073300 Sobic005G073300 Sobic004G190300--Sobic005G073300 Sobic002G054800 Sobic002G054800 Sobic004G190300--Sobic002G054800 Sobic003G149700 Sobic003G149700 Sobic004G190300--Sobic003G149700 Sobic003G356500 Sobic003G356500 Sobic004G190300--Sobic003G356500 Sobic001G380100 Sobic001G380100 Sobic004G190300--Sobic001G380100 Sobic002G240300 Sobic002G240300 Sobic006G210600--Sobic002G240300 Sobic006G155400 Sobic006G155400 Sobic006G210600--Sobic006G155400 Sobic005G150250 Sobic005G150250 Sobic006G210600--Sobic005G150250 Sobic006G210600--Sobic002G132201 Sobic009G022600 Sobic009G022600 Sobic006G210600--Sobic009G022600 Sobic006G210600--Sobic005G073300 Sobic006G210600--Sobic003G149700 Sobic006G210600--Sobic002G054800 Sobic006G210600--Sobic010G215201 Sobic002G132201--Sobic002G054800 Sobic002G132201--Sobic005G073300 Sobic002G132201--Sobic003G149700 Sobic001G071500 Sobic001G071500 Sobic002G132201--Sobic001G071500 Sobic002G240200 Sobic002G240200 Sobic002G132201--Sobic002G240200 Sobic002G132201--Sobic009G022600 Sobic002G132201--Sobic010G215201 Sobic001G371650 Sobic001G371650 Sobic002G132201--Sobic001G371650 Sobic002G132201--Sobic006G155400 Sobic010G215201--Sobic002G054800 Sobic010G215201--Sobic001G071500 Sobic010G215201--Sobic002G240200 Sobic010G215201--Sobic005G073300 Sobic008G030801 Sobic008G030801 Sobic010G215201--Sobic008G030801 Sobic010G215201--Sobic002G132201 Sobic002G172300 Sobic002G172300 Sobic010G215201--Sobic002G172300 Sobic010G215201--Sobic001G371650 Sobic001G421100 Sobic001G421100 Sobic010G215201--Sobic001G421100 Sobic006G161200--Sobic008G030801 Sobic003G229900 Sobic003G229900 Sobic006G161200--Sobic003G229900 Sobic001G273950 Sobic001G273950 Sobic006G161200--Sobic001G273950 Sobic006G049633 Sobic006G049633 Sobic006G161200--Sobic006G049633 Sobic002G055000 Sobic002G055000 Sobic006G161200--Sobic002G055000 Sobic010G011500 Sobic010G011500 Sobic006G161200--Sobic010G011500 Sobic008G061900 Sobic008G061900 Sobic006G161200--Sobic008G061900 Sobic006G161200--Sobic010G215201 Sobic005G205100 Sobic005G205100 Sobic006G161200--Sobic005G205100 Sobic005G073300--Sobic002G054800 Sobic005G073300--Sobic002G132201 Sobic005G073300--Sobic001G071500 Sobic005G073300--Sobic002G240200 Sobic005G073300--Sobic010G215201 Sobic005G073300--Sobic003G149700 Sobic005G073300--Sobic009G022600 Sobic005G073300--Sobic002G172300 Sobic005G073300--Sobic008G030801 Sobic002G054800--Sobic005G073300 Sobic002G054800--Sobic002G132201 Sobic002G054800--Sobic001G071500 Sobic002G054800--Sobic002G240200 Sobic002G054800--Sobic010G215201 Sobic002G054800--Sobic003G149700 Sobic002G054800--Sobic001G371650 Sobic002G054800--Sobic009G022600 Sobic002G054800--Sobic008G030801 Sobic003G149700--Sobic002G132201 Sobic003G149700--Sobic005G150250 Sobic003G149700--Sobic005G073300 Sobic003G149700--Sobic009G022600 Sobic003G149700--Sobic006G155400 Sobic003G149700--Sobic002G054800 Sobic003G149700--Sobic001G071500 Sobic003G149700--Sobic003G356500 Sobic003G193900 Sobic003G193900 Sobic003G149700--Sobic003G193900 Sobic003G356500--Sobic003G149700 Sobic003G356500--Sobic005G150250 Sobic003G356500--Sobic006G155400 Sobic003G356500--Sobic002G132201 Sobic003G356500--Sobic009G022600 Sobic001G468900 Sobic001G468900 Sobic003G356500--Sobic001G468900 Sobic003G356500--Sobic003G193900 Sobic003G059500 Sobic003G059500 Sobic003G356500--Sobic003G059500 Sobic004G089801 Sobic004G089801 Sobic003G356500--Sobic004G089801 Sobic010G083200 Sobic010G083200 Sobic001G380100--Sobic010G083200 Sobic001G380100--Sobic004G190300 Sobic001G204400 Sobic001G204400 Sobic001G380100--Sobic001G204400 Sobic010G110050 Sobic010G110050 Sobic001G380100--Sobic010G110050 Sobic004G084800 Sobic004G084800 Sobic001G380100--Sobic004G084800 Sobic002G280001 Sobic002G280001 Sobic001G380100--Sobic002G280001 Sobic002G266250 Sobic002G266250 Sobic001G380100--Sobic002G266250 Sobic001G004901 Sobic001G004901 Sobic001G380100--Sobic001G004901 Sobic007G031000 Sobic007G031000 Sobic001G380100--Sobic007G031000
Octagon: transcription factors


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